HNRNPH1 (Takifugu rubripes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTRUG00000001031 T42197_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPH2
M151_0.6 		Homo sapiens GGGAGGG RNAcompete
Ray et al.(2013)
RNCMPT00160 		0.881
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000002412 RRM 10 81
ENSTRUP00000002412 RRM 110 179
ENSTRUP00000002412 RRM 277 339
ENSTRUP00000002413 RRM 9 80
ENSTRUP00000002413 RRM 109 178
ENSTRUP00000002413 RRM 276 338
ENSTRUP00000002414 RRM 8 79
ENSTRUP00000002414 RRM 108 177
ENSTRUP00000002414 RRM 278 345
ENSTRUP00000002415 RRM 9 80
ENSTRUP00000002415 RRM 109 178
ENSTRUP00000002415 RRM 276 338

Links

Other RRM family RBPs
Other Takifugu rubripes RBPs

93 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH70969 Xenopus laevis AAH70969 I 0.862
AAH77770 Xenopus laevis AAH77770 I 0.881
AAI10708 Xenopus laevis AAI10708 I 0.881
Ame_R005224 Ailuropoda melanoleuca Ame_R005224 I 0.814
Ame_R009346 Ailuropoda melanoleuca Ame_R009346 I 0.895
Ame_R018226 Ailuropoda melanoleuca Ame_R018226 I 0.876
ENSACAG00000016323 Anolis carolinensis ENSACAG00000016323 I 0.871
HNRH2_BOVIN Bos taurus ENSBTAG00000007499 I 0.876
HNRPF_BOVIN Bos taurus ENSBTAG00000008853 I 0.810
HNRNPH1 Bos taurus ENSBTAG00000009389 I 0.895
HNRNPH1 Canis familiaris ENSCAFG00000000336 I 0.895
HNRNPF Canis familiaris ENSCAFG00000007044 I 0.814
HNRNPH2 Canis familiaris ENSCAFG00000017693 I 0.876
ENSCHOG00000003841 Choloepus hoffmanni ENSCHOG00000003841 I 0.800
HNRNPH2 Callithrix jacchus ENSCJAG00000004908 I 0.881
HNRNPH1 Callithrix jacchus ENSCJAG00000009931 I 0.895
HNRNPF Callithrix jacchus ENSCJAG00000016238 I 0.810
HNRNPH1 Cavia porcellus ENSCPOG00000001485 I 0.895
HNRNPF Cavia porcellus ENSCPOG00000003678 I 0.810
HNRNPH2 Cavia porcellus ENSCPOG00000012405 I 0.876
hnrnph1l Danio rerio ENSDARG00000005551 I 0.929
HNRNPH3 Danio rerio ENSDARG00000039466 I 0.748
ENSDORG00000005431 Dipodomys ordii ENSDORG00000005431 I 0.814
Hnrnph1 Dipodomys ordii ENSDORG00000005453 I 0.895
LOC100050002 Equus caballus ENSECAG00000003229 I 0.805
LOC100067495 Equus caballus ENSECAG00000014429 I 0.800
LOC100057665 Equus caballus ENSECAG00000023575 I 0.876
HNRNPH2 Echinops telfairi ENSETEG00000008416 I 0.876
HNRNPH1 Echinops telfairi ENSETEG00000011303 I 0.886
HNRNPH1 Felis catus ENSFCAG00000001204 I 0.790
HNRNPH2 Felis catus ENSFCAG00000015400 I 0.833
HNRNPH2 Homo sapiens ENSG00000126945 D 0.881
HNRNPH1 Homo sapiens ENSG00000169045 I 0.895
HNRNPF Homo sapiens ENSG00000169813 I 0.810
HNRNPH3 Gasterosteus aculeatus ENSGACG00000016118 I 0.752
HNRNPH1 Gasterosteus aculeatus ENSGACG00000018352 I 0.957
Q5F3I8_CHICK Gallus gallus ENSGALG00000005955 I 0.895
HNRNPH2 Gorilla gorilla ENSGGOG00000008096 I 0.881
HNRNPF Gorilla gorilla ENSGGOG00000010867 I 0.810
HNRNPH1 Gorilla gorilla ENSGGOG00000025844 I 0.895
HNRNPF Loxodonta africana ENSLAFG00000000424 I 0.814
HNRNPH1 Loxodonta africana ENSLAFG00000015766 I 0.895
ENSMGAG00000007328 Meleagris gallopavo ENSMGAG00000007328 I 0.895
HNRNPF Microcebus murinus ENSMICG00000001490 I 0.810
ENSMICG00000014218 Microcebus murinus ENSMICG00000014218 I 0.790
HNRNPF Myotis lucifugus ENSMLUG00000007261 I 0.705
ENSMMUG00000017392 Macaca mulatta ENSMMUG00000017392 I 0.743
HNRNPH2 Macaca mulatta ENSMMUG00000019580 I 0.881
HNRNPF Macaca mulatta ENSMMUG00000020982 I 0.810
ENSMODG00000009436 Monodelphis domestica ENSMODG00000009436 I 0.895
Hnrnph1 Mus musculus ENSMUSG00000007850 I 0.895
Hnrnpf Mus musculus ENSMUSG00000042079 I 0.810
Hnrnph2 Mus musculus ENSMUSG00000045427 I 0.867
ENSOANG00000010222 Ornithorhynchus anatinus ENSOANG00000010222 I 0.895
ENSOCUG00000006387 Oryctolagus cuniculus ENSOCUG00000006387 I 0.876
ENSOCUG00000010629 Oryctolagus cuniculus ENSOCUG00000010629 I 0.876
HNRNPH1 Oryctolagus cuniculus ENSOCUG00000017150 I 0.895
ENSOCUG00000024604 Oryctolagus cuniculus ENSOCUG00000024604 I 0.767
ENSOCUG00000024719 Oryctolagus cuniculus ENSOCUG00000024719 I 0.810
HNRNPH1 Otolemur garnettii ENSOGAG00000012631 I 0.781
HNRNPF Otolemur garnettii ENSOGAG00000013734 I 0.810
HNRNPH2 Ochotona princeps ENSOPRG00000007985 I 0.876
HNRNPH1 Oryzias latipes ENSORLG00000006932 I 0.952
HNRNPH3 Oryzias latipes ENSORLG00000010499 I 0.748
HNRNPH2 Procavia capensis ENSPCAG00000003333 I 0.867
HNRNPF Procavia capensis ENSPCAG00000013169 I 0.814
ENSPPYG00000002212 Pongo pygmaeus ENSPPYG00000002212 I 0.810
ENSPPYG00000016121 Pongo pygmaeus ENSPPYG00000016121 I 0.895
ENSPPYG00000020553 Pongo pygmaeus ENSPPYG00000020553 I 0.881
HNRNPF Pan troglodytes ENSPTRG00000002446 I 0.810
HNRNPH1 Pan troglodytes ENSPTRG00000017617 I 0.895
HNRNPH2 Pan troglodytes ENSPTRG00000022107 I 0.881
HNRNPH2 Pteropus vampyrus ENSPVAG00000001571 I 0.876
HNRNPH1 Pteropus vampyrus ENSPVAG00000007670 I 0.705
HNRNPF Pteropus vampyrus ENSPVAG00000011646 I 0.824
Hnrph1 Rattus norvegicus ENSRNOG00000003399 I 0.895
Hnrnph2 Rattus norvegicus ENSRNOG00000011661 I 0.867
Hnrnpf Rattus norvegicus ENSRNOG00000014562 I 0.810
ENSRNOG00000015533 Rattus norvegicus ENSRNOG00000015533 I 0.729
HNRNPH1 Sorex araneus ENSSARG00000003024 I 0.790
HNRNPF Sorex araneus ENSSARG00000010059 I 0.810
HNRNPH2 Sorex araneus ENSSARG00000014182 I 0.876
HNRNPF Sus scrofa ENSSSCG00000010203 I 0.810
HNRNPH1 Sus scrofa ENSSSCG00000014022 I 0.895
HNRNPH1 Taeniopygia guttata ENSTGUG00000001085 I 0.805
HNRNPH3 Tetraodon nigroviridis ENSTNIG00000013788 I 0.762
HNRNPH3 Takifugu rubripes ENSTRUG00000005350 I 0.757
HNRNPH1 Tarsius syrichta ENSTSYG00000006417 I 0.800
HNRNPH2 Tarsius syrichta ENSTSYG00000007811 I 0.876
HNRNPH1 Tursiops truncatus ENSTTRG00000000470 I 0.781
HNRNPH2 Tursiops truncatus ENSTTRG00000012786 I 0.876
hnrnph2 Xenopus tropicalis ENSXETG00000018321 I 0.886