Glyma16g02500.1 (Glycine max)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Glyma16g02500.1 T52874_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma16g02500.1 RRM 4 65
Glyma16g02500.1 RRM 93 156

Links

Other RRM family RBPs
Other Glycine max RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29742.m001371 Ricinus communis 29742.m001371 N 0.810
RS31a Arabidopsis thaliana AT2G46610-TAIR-G N 0.730
RS31 Arabidopsis thaliana AT3G61860-TAIR-G N 0.794
BGIOSIBCE005422 Oryza indica BGIOSIBCE005422 N 0.701
BGIOSIBCE013939 Oryza indica BGIOSIBCE013939 N 0.746
BRADI5G01430 Brachypodium distachyon BRADI5G01430 N 0.714
cassava31732.valid.m1 Manihot esculenta cassava31732.valid.m1 N 0.717
cassava31733.valid.m1 Manihot esculenta cassava31733.valid.m1 N 0.717
cassava43624.valid.m1 Manihot esculenta cassava43624.valid.m1 N 0.825
cassava43625.valid.m1 Manihot esculenta cassava43625.valid.m1 N 0.825
Cucsa.259460 Cucumis sativus Cucsa.259460 N 0.857
XM_002882032.1 Arabidopsis lyrata fgenesh2_kg.4__2884__AT2G46610.1 N 0.794
XM_002878371.1 Arabidopsis lyrata fgenesh2_kg.5__2682__AT3G61860.1 N 0.786
Glyma07g05900.1 Glycine max Glyma07g05900.1 N 0.984
Glyma10g38400.1 Glycine max Glyma10g38400.1 N 0.709
Glyma20g29460.1 Glycine max Glyma20g29460.1 N 0.709
LOC_Os02g03040 Oryza sativa LOC_Os02g03040 N 0.701
LOC_Os04g02870 Oryza sativa LOC_Os04g02870 N 0.746
MDP0000263938 Malus x domestica MDP0000263938 N 0.802
MDP0000387508 Malus x domestica MDP0000387508 N 0.802
Medtr8g029490 Medicago truncatula Medtr8g029490 N 0.905
mgf011632m Mimulus guttatus mgf011632m N 0.810
PDK_20s1467051g001 Phoenix dactylifera PDK_20s1467051g001 N 0.732
PK15848.1 Cannabis sativa PK15848.1 N 0.841
B9GPU7_POPTR Populus trichocarpa POPTR_0002s15490 N 0.732
B9GR47_POPTR Populus trichocarpa POPTR_0002s17560 N 0.786
B9I4G0_POPTR Populus trichocarpa POPTR_0012s13920 N 0.701
B9IC71_POPTR Populus trichocarpa POPTR_0014s07270 N 0.717
B9I911_POPTR Populus trichocarpa POPTR_0014s09730 N 0.786
B9ID09_POPTR Populus trichocarpa POPTR_0015s13880 N 0.709
ppa008137m Prunus persica ppa008137m N 0.810