ENSTNIG00000002555 (Tetraodon nigroviridis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSTNIG00000002555 T19593_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000005106 KH 100 143
ENSTNIP00000005106 KH 152 212
ENSTNIP00000005106 KH 224 284
ENSTNIP00000005106 KH 297 356
ENSTNIP00000005106 KH 366 424
ENSTNIP00000005106 KH 440 500
ENSTNIP00000005106 KH 512 573
ENSTNIP00000005106 KH 586 646
ENSTNIP00000005106 KH 658 719
ENSTNIP00000005106 KH 732 793
ENSTNIP00000005106 KH 805 866
ENSTNIP00000005106 KH 878 964
ENSTNIP00000005106 KH 971 1031
ENSTNIP00000005106 KH 1051 1114
ENSTNIP00000005106 KH 1126 1187

Links

Other KH family RBPs
Other Tetraodon nigroviridis RBPs

31 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSACAG00000003606 Anolis carolinensis ENSACAG00000003606 N 0.801
HDLBP Oryctolagus cuniculus ENSOCUG00000012667 N 0.738
HDLBP Ochotona princeps ENSOPRG00000011965 N 0.742
HDLBP Oryzias latipes ENSORLG00000002226 N 0.722
ENSORLG00000006581 Oryzias latipes ENSORLG00000006581 N 0.917
ENSPPYG00000013351 Pongo pygmaeus ENSPPYG00000013351 N 0.729
HDLBP Pan troglodytes ENSPTRG00000013121 N 0.736
HDLBP Pteropus vampyrus ENSPVAG00000000555 N 0.732
Hdlbp Rattus norvegicus ENSRNOG00000031479 N 0.735
HDLBP Tetraodon nigroviridis ENSTNIG00000004185 N 0.720
HDLBP Takifugu rubripes ENSTRUG00000012148 N 0.726
ENSTRUG00000012888 Takifugu rubripes ENSTRUG00000012888 N 0.967
hdlbp Xenopus tropicalis ENSXETG00000012164 N 0.736
Ame_R011476 Ailuropoda melanoleuca Ame_R011476 N 0.732
ENSOANG00000011759 Ornithorhynchus anatinus ENSOANG00000011759 N 0.734
Hdlbp Mus musculus ENSMUSG00000034088 N 0.734
HDLBP Monodelphis domestica ENSMODG00000016033 N 0.738
HDLBP Canis familiaris ENSCAFG00000012913 N 0.733
HDLBP Callithrix jacchus ENSCJAG00000006152 N 0.731
HDLBP Cavia porcellus ENSCPOG00000006297 N 0.739
hdlbp Danio rerio ENSDARG00000009830 N 0.720
LOC100057882 Equus caballus ENSECAG00000012829 N 0.740
HDLBP Homo sapiens ENSG00000115677 N 0.736
HDLBP Gasterosteus aculeatus ENSGACG00000004648 N 0.716
ENSGACG00000019361 Gasterosteus aculeatus ENSGACG00000019361 N 0.920
VIGLN_CHICK Gallus gallus ENSGALG00000005823 N 0.735
HDLBP Gorilla gorilla ENSGGOG00000004392 N 0.736
HDLBP Loxodonta africana ENSLAFG00000014826 N 0.734
HDLBP Meleagris gallopavo ENSMGAG00000003686 N 0.734
HDLBP Myotis lucifugus ENSMLUG00000005628 N 0.721
AAH44314 Xenopus laevis AAH44314 N 0.733