27316 (Aureococcus anophagefferens)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 27316 T20575_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
27316 KH 119 168

Links

Other KH family RBPs
Other Aureococcus anophagefferens RBPs

85 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_10658 Mucor circinelloides estExt_Genewise1Plus.C_10658 N 0.700
mgf006621m Mimulus guttatus mgf006621m N 0.720
s_468317 Phytophthora sojae s_468317 N 0.780
GRMZM2G085005 Zea mays GRMZM2G085005 N 0.700
GRMZM2G139198 Zea mays GRMZM2G139198 N 0.700
EFA79428.1 Polysphondylium pallidum EFA79428.1 N 0.700
Scas_Contig632.19 Saccharomyces castellii Scas_Contig632.19 N 0.700
0700010277 Ostreococcus tauri 0700010277 N 0.700
3712.m00082 Tetrahymena thermophila 3712.m00082 N 0.700
GP3.070330 Batrachochytrium dendrobatidis GP3.070330 N 0.720
Glyma18g08100.1 Glycine max Glyma18g08100.1 N 0.700
Glyma18g08080.1 Glycine max Glyma18g08080.1 N 0.700
estExt_Genewise1Plus.C_600117 Volvox carteri estExt_Genewise1Plus.C_600117 N 0.740
estExt_Genewise1Plus.C_chr_70397 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_70397 N 0.700
fgenesh1_pg.scaffold_18000119 Nematostella vectensis fgenesh1_pg.scaffold_18000119 N 0.720
fgenesh1_pm.C_scaffold_5000030 Phytophthora ramorum fgenesh1_pm.C_scaffold_5000030 N 0.780
fgenesh2_pm.11_#_145 Fragilariopsis cylindrus fgenesh2_pm.11_#_145 N 0.780
fgenesh3_pm.54__15 Postia placenta fgenesh3_pm.54__15 N 0.760
fgenesh_newKGs_pm.139__21 Emiliania huxleyi fgenesh_newKGs_pm.139__21 N 0.720
GID1.0042265 Dictyostelium purpureum GID1.0042265 N 0.700
EDP42908.1 Malassezia globosa EDP42908.1 N 0.700
e_gw1.12.287.1 Serpula lacrymans e_gw1.12.287.1 N 0.740
PDK_20s1552091g001 Phoenix dactylifera PDK_20s1552091g001 N 0.720
PDK_20s1554761g001 Phoenix dactylifera PDK_20s1554761g001 N 0.700
ppa009897m Prunus persica ppa009897m N 0.740
ppa011086m Prunus persica ppa011086m N 0.740
XP_001202155.1 Strongylocentrotus purpuratus XP_001202155.1 N 0.700
XP_001202160.1 Strongylocentrotus purpuratus XP_001202160.1 N 0.700
XP_002162789.1 Hydra magnipapillata XP_002162789.1 N 0.700
XP_791733.2 Strongylocentrotus purpuratus XP_791733.2 N 0.700
MDP0000754021 Malus x domestica MDP0000754021 N 0.740
MDP0000265633 Malus x domestica MDP0000265633 N 0.740
MDP0000136407 Malus x domestica MDP0000136407 N 0.740
e_gw1.15.315.1 Tremella mesenterica e_gw1.15.315.1 N 0.700
e_gw1.2.756.1 Heterobasidion annosum e_gw1.2.756.1 N 0.740
estExt_fgenesh1_pg.C_190237 Phytophthora capsici estExt_fgenesh1_pg.C_190237 N 0.800
estExt_fgenesh2_kg.C_20130 Agaricus bisporus estExt_fgenesh2_kg.C_20130 N 0.740
GSPATP00020703001 Paramecium tetraurelia GSPATP00020703001 N 0.720
GSPATP00021981001 Paramecium tetraurelia GSPATP00021981001 N 0.720
gw1.1.2472.1 Pleurotus ostreatus gw1.1.2472.1 N 0.740
MDP0000120063 Malus x domestica MDP0000120063 N 0.740
XP_798188.2 Strongylocentrotus purpuratus XP_798188.2 N 0.700
estExt_Genewise1.C_5820041 Capitella teleta estExt_Genewise1.C_5820041 N 0.740
AMAG_12889 Allomyces macrogynus AMAG_12889 N 0.720
pno1 Dictyostelium discoideum DDB_G0287557 N 0.700
ENSCING00000009577 Ciona intestinalis ENSCING00000009577 N 0.700
ENSCSAVG00000001303 Ciona savignyi ENSCSAVG00000001303 N 0.700
pno1 Danio rerio ENSDARG00000008502 N 0.700
PNO1_CHICK Gallus gallus ENSGALG00000009093 N 0.700
PNO1 Meleagris gallopavo ENSMGAG00000004514 N 0.700
Pno1 Mus musculus ENSMUSG00000020116 N 0.700
Q6VBQ6_ORYLA Oryzias latipes ENSORLG00000002371 N 0.700
BRADI2G52180 Brachypodium distachyon BRADI2G52180 N 0.700
BGIOSIBCE009391 Oryza indica BGIOSIBCE009391 N 0.700
PK08146.1 Cannabis sativa PK08146.1 N 0.740
AMAG_14219 Allomyces macrogynus AMAG_14219 N 0.720
PITG_01680 Phytophthora infestans PITG_01680 N 0.780
PTTG_01898 Puccinia triticina PTTG_01898 N 0.720
RO3G_00885 Rhizopus oryzae RO3G_00885 N 0.720
RO3G_05288 Rhizopus oryzae RO3G_05288 N 0.720
SPPG_04498 Spizellomyces punctatus SPPG_04498 N 0.740
SPRG_02415 Saprolegnia parasitica SPRG_02415 N 0.780
UM03495 Ustilago maydis UM03495 N 0.720
PNO1 Taeniopygia guttata ENSTGUG00000002369 N 0.720
pno1 Xenopus tropicalis ENSXETG00000017349 N 0.700
Cucsa.201760 Cucumis sativus Cucsa.201760 N 0.720
e_gw1.2.2126.1 Schizophyllum commune e_gw1.2.2126.1 N 0.780
e_gw1.226.39.1 Physcomitrella patens e_gw1.226.39.1 N 0.720
e_gw1.7.528.1 Ostreococcus RCC809 e_gw1.7.528.1 N 0.720
e_gw1.8.261.1 Sporobolomyces roseus e_gw1.8.261.1 N 0.740
e_gwEuk.7.409.1 Ostreococcus lucimarinus e_gwEuk.7.409.1 N 0.720
e_gwh1.2.512.1 Laccaria bicolor e_gwh1.2.512.1 N 0.740
e_gww2.1.865.1 Phanerochaete chrysosporium e_gww2.1.865.1 N 0.760
Cucsa.041830 Cucumis sativus Cucsa.041830 N 0.720
Chlre2_kg.scaffold_20000177 Chlamydomonas reinhardtii Chlre2_kg.scaffold_20000177 N 0.740
cassava30594.valid.m1 Manihot esculenta cassava30594.valid.m1 N 0.700
LOC_Os01g57910 Oryza sativa LOC_Os01g57910 N 0.700
LOC_Os03g02420 Oryza sativa LOC_Os03g02420 N 0.700
PHATRDRAFT_9929 Phaeodactylum tricornutum Phatr9929 N 0.760
B9GHH7_POPTR Populus trichocarpa POPTR_0001s47320 N 0.720
B9N5M8_POPTR Populus trichocarpa POPTR_0011s16880 N 0.720
SB03G036840 Sorghum bicolor Sb03g036840 N 0.700
THAPSDRAFT_35041 Thalassiosira pseudonana Thaps35041 N 0.760
28525.m000262 Ricinus communis 28525.m000262 N 0.720
estExt_Genewise1.C_260084 Melampsora laricis populina estExt_Genewise1.C_260084 N 0.720