Medtr7g080640 (Medicago truncatula)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 Medtr7g080640 T21433_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr7g080640.1 KH 143 218

Links

Other KH family RBPs
Other Medicago truncatula RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa009701m Prunus persica ppa009701m N 0.934
GRMZM2G085582 Zea mays GRMZM2G085582 N 0.706
GRMZM2G063643 Zea mays GRMZM2G063643 N 0.776
mgf011994m Mimulus guttatus mgf011994m N 0.737
mgf005196m Mimulus guttatus mgf005196m N 0.908
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.921
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.759
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.882
Glyma14g38730.1 Glycine max Glyma14g38730.1 N 0.829
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.789
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.934
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.750
GRMZM2G122569 Zea mays GRMZM2G122569 N 0.714
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.789
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.855
MDP0000665847 Malus x domestica MDP0000665847 N 0.908
MDP0000501473 Malus x domestica MDP0000501473 N 0.882
MDP0000186494 Malus x domestica MDP0000186494 N 0.908
MDP0000119110 Malus x domestica MDP0000119110 N 0.882
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.921
chr3.CM0634.210.nc Lotus japonicus chr3.CM0634.210.nc N 0.895
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.882
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.882
Medtr3g083820 Medicago truncatula Medtr3g083820 N 0.829
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.831
Glyma02g40440.1 Glycine max Glyma02g40440.1 N 0.829
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.921
LOC_Os03g60110 Oryza sativa LOC_Os03g60110 N 0.763
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.882
XM_002881558.1 Arabidopsis lyrata fgenesh2_kg.4__1930__AT2G38610.2 N 0.873
XM_002882529.1 Arabidopsis lyrata fgenesh2_kg.3__864__AT3G08620.1 N 0.829
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.726
BGIOSIBCE013438 Oryza indica BGIOSIBCE013438 N 0.737
AT3G08620 Arabidopsis thaliana AT3G08620-TAIR-G N 0.868
AT2G38610 Arabidopsis thaliana AT2G38610-TAIR-G N 0.873
PK23097.1 Cannabis sativa PK23097.1 N 0.895
B9I777_POPTR Populus trichocarpa POPTR_0013s15580 N 0.763
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.812
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.829
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.908
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.934
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.882
cassava38069.valid.m1 Manihot esculenta cassava38069.valid.m1 N 0.750
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.842
29945.m000086 Ricinus communis 29945.m000086 N 0.776
27955.m000377 Ricinus communis 27955.m000377 N 0.868
SB09G023640 Sorghum bicolor Sb09g023640 N 0.702
SB02G006770 Sorghum bicolor Sb02g006770 N 0.789
SB01G003680 Sorghum bicolor Sb01g003680 N 0.763
PK22673.1 Cannabis sativa PK22673.1 N 0.855