SB01G003680 (Sorghum bicolor)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 Sb01g003680 T20262_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb01g003680.1 KH 142 214

Links

Other KH family RBPs
Other Sorghum bicolor RBPs

57 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.986
LOC_Os03g60110 Oryza sativa LOC_Os03g60110 N 0.973
BGIOSIBCE013438 Oryza indica BGIOSIBCE013438 N 0.945
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.877
GRMZM2G063643 Zea mays GRMZM2G063643 N 0.863
SB02G006770 Sorghum bicolor Sb02g006770 N 0.863
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.849
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.838
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.822
29945.m000086 Ricinus communis 29945.m000086 N 0.822
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.822
MDP0000501473 Malus x domestica MDP0000501473 N 0.822
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.822
MDP0000119110 Malus x domestica MDP0000119110 N 0.822
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.822
27955.m000377 Ricinus communis 27955.m000377 N 0.813
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.813
mgf011994m Mimulus guttatus mgf011994m N 0.808
PK23097.1 Cannabis sativa PK23097.1 N 0.808
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.808
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.803
MDP0000665847 Malus x domestica MDP0000665847 N 0.797
MDP0000186494 Malus x domestica MDP0000186494 N 0.797
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.795
chr3.CM0634.210.nc Lotus japonicus chr3.CM0634.210.nc N 0.789
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.789
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.787
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.787
AT2G38610 Arabidopsis thaliana AT2G38610-TAIR-G N 0.785
XM_002881558.1 Arabidopsis lyrata fgenesh2_kg.4__1930__AT2G38610.2 N 0.785
ppa009701m Prunus persica ppa009701m N 0.776
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.776
mgf005196m Mimulus guttatus mgf005196m N 0.776
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.776
cassava38069.valid.m1 Manihot esculenta cassava38069.valid.m1 N 0.767
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.763
Medtr7g080640 Medicago truncatula Medtr7g080640 N 0.763
PK22673.1 Cannabis sativa PK22673.1 N 0.763
Medtr3g083820 Medicago truncatula Medtr3g083820 N 0.763
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.756
B9I777_POPTR Populus trichocarpa POPTR_0013s15580 N 0.753
AT3G08620 Arabidopsis thaliana AT3G08620-TAIR-G N 0.750
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.744
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.744
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.735
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.726
XM_002882529.1 Arabidopsis lyrata fgenesh2_kg.3__864__AT3G08620.1 N 0.724
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.723
GRMZM2G085582 Zea mays GRMZM2G085582 N 0.723
LOC_Os01g60260 Oryza sativa LOC_Os01g60260 N 0.720
GSVIVG00024534001 Vitis vinifera GSVIVG00024534001 N 0.712
GRMZM2G122569 Zea mays GRMZM2G122569 N 0.711
SB09G023640 Sorghum bicolor Sb09g023640 N 0.711
Glyma14g38730.1 Glycine max Glyma14g38730.1 N 0.711
Glyma02g40440.1 Glycine max Glyma02g40440.1 N 0.711
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.706
LjSGA_139736.1.1 Lotus japonicus LjSGA_139736.1.1 N 0.704