PK23097.1 (Cannabis sativa)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 PK23097.1 T17965_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK23097.1 KH 166 237

Links

Other KH family RBPs
Other Cannabis sativa RBPs

63 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000186494 Malus x domestica MDP0000186494 N 0.986
MDP0000665847 Malus x domestica MDP0000665847 N 0.986
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.986
MDP0000119110 Malus x domestica MDP0000119110 N 0.986
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.986
MDP0000501473 Malus x domestica MDP0000501473 N 0.986
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.986
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.972
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.960
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.960
ppa009701m Prunus persica ppa009701m N 0.960
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.947
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.947
27955.m000377 Ricinus communis 27955.m000377 N 0.946
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.944
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.933
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.931
mgf005196m Mimulus guttatus mgf005196m N 0.907
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.905
Medtr7g080640 Medicago truncatula Medtr7g080640 N 0.895
PK22673.1 Cannabis sativa PK22673.1 N 0.893
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.892
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.875
chr3.CM0634.210.nc Lotus japonicus chr3.CM0634.210.nc N 0.868
AT3G08620 Arabidopsis thaliana AT3G08620-TAIR-G N 0.853
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.851
SB02G006770 Sorghum bicolor Sb02g006770 N 0.849
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.849
XM_002881558.1 Arabidopsis lyrata fgenesh2_kg.4__1930__AT2G38610.2 N 0.846
AT2G38610 Arabidopsis thaliana AT2G38610-TAIR-G N 0.846
Glyma14g38730.1 Glycine max Glyma14g38730.1 N 0.840
Medtr3g083820 Medicago truncatula Medtr3g083820 N 0.840
Glyma02g40440.1 Glycine max Glyma02g40440.1 N 0.840
XM_002882529.1 Arabidopsis lyrata fgenesh2_kg.3__864__AT3G08620.1 N 0.840
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.831
mgf011994m Mimulus guttatus mgf011994m N 0.822
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.812
GRMZM2G063643 Zea mays GRMZM2G063643 N 0.808
SB01G003680 Sorghum bicolor Sb01g003680 N 0.808
29945.m000086 Ricinus communis 29945.m000086 N 0.806
B9I777_POPTR Populus trichocarpa POPTR_0013s15580 N 0.806
LOC_Os03g60110 Oryza sativa LOC_Os03g60110 N 0.806
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.795
cassava38069.valid.m1 Manihot esculenta cassava38069.valid.m1 N 0.792
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.783
BGIOSIBCE013438 Oryza indica BGIOSIBCE013438 N 0.778
Medtr5g083520 Medicago truncatula Medtr5g083520 N 0.762
GSVIVG00024534001 Vitis vinifera GSVIVG00024534001 N 0.753
LjSGA_139736.1.1 Lotus japonicus LjSGA_139736.1.1 N 0.741
GRMZM2G122569 Zea mays GRMZM2G122569 N 0.735
GRMZM2G085582 Zea mays GRMZM2G085582 N 0.735
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.726
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.725
SB09G023640 Sorghum bicolor Sb09g023640 N 0.723
LOC_Os01g60260 Oryza sativa LOC_Os01g60260 N 0.720
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.720
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.720
MDP0000077753 Malus x domestica MDP0000077753 N 0.708
MDP0000268130 Malus x domestica MDP0000268130 N 0.708
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.707
BGIOSIBCE019437 Oryza indica BGIOSIBCE019437 N 0.706
LOC_Os05g40290 Oryza sativa LOC_Os05g40290 N 0.706
SB03G038070 Sorghum bicolor Sb03g038070 N 0.706