AT2G38610 (Arabidopsis thaliana)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 AT2G38610-TAIR-G T18094_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
AT2G38610.1-P KH 147 224
AT2G38610.2-P KH 147 224

Links

Other KH family RBPs
Other Arabidopsis thaliana RBPs

48 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002881558.1 Arabidopsis lyrata fgenesh2_kg.4__1930__AT2G38610.2 N 1.000
Medtr7g080640 Medicago truncatula Medtr7g080640 N 0.873
ppa009701m Prunus persica ppa009701m N 0.872
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.872
mgf005196m Mimulus guttatus mgf005196m N 0.872
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.872
MDP0000501473 Malus x domestica MDP0000501473 N 0.859
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.859
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.859
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.859
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.859
27955.m000377 Ricinus communis 27955.m000377 N 0.859
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.859
MDP0000119110 Malus x domestica MDP0000119110 N 0.859
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.859
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.848
AT3G08620 Arabidopsis thaliana AT3G08620-TAIR-G N 0.846
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.846
MDP0000186494 Malus x domestica MDP0000186494 N 0.846
PK23097.1 Cannabis sativa PK23097.1 N 0.846
MDP0000665847 Malus x domestica MDP0000665847 N 0.846
chr3.CM0634.210.nc Lotus japonicus chr3.CM0634.210.nc N 0.835
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.833
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.821
PK22673.1 Cannabis sativa PK22673.1 N 0.808
XM_002882529.1 Arabidopsis lyrata fgenesh2_kg.3__864__AT3G08620.1 N 0.808
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.802
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.802
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.785
SB01G003680 Sorghum bicolor Sb01g003680 N 0.785
Medtr3g083820 Medicago truncatula Medtr3g083820 N 0.782
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.782
Glyma02g40440.1 Glycine max Glyma02g40440.1 N 0.782
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.782
Glyma14g38730.1 Glycine max Glyma14g38730.1 N 0.782
LOC_Os03g60110 Oryza sativa LOC_Os03g60110 N 0.782
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.782
SB02G006770 Sorghum bicolor Sb02g006770 N 0.772
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.772
GRMZM2G063643 Zea mays GRMZM2G063643 N 0.772
BGIOSIBCE013438 Oryza indica BGIOSIBCE013438 N 0.756
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.744
29945.m000086 Ricinus communis 29945.m000086 N 0.744
B9I777_POPTR Populus trichocarpa POPTR_0013s15580 N 0.744
mgf011994m Mimulus guttatus mgf011994m N 0.734
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.733
cassava38069.valid.m1 Manihot esculenta cassava38069.valid.m1 N 0.718