LOC_Os03g60110 (Oryza sativa)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 LOC_Os03g60110 T20140_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os03g60110.1 KH 146 216

Links

Other KH family RBPs
Other Oryza sativa RBPs

54 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SB01G003680 Sorghum bicolor Sb01g003680 N 0.973
BGIOSIBCE013438 Oryza indica BGIOSIBCE013438 N 0.972
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.959
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.849
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.847
29945.m000086 Ricinus communis 29945.m000086 N 0.845
SB02G006770 Sorghum bicolor Sb02g006770 N 0.836
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.836
GRMZM2G063643 Zea mays GRMZM2G063643 N 0.836
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.819
MDP0000119110 Malus x domestica MDP0000119110 N 0.819
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.819
MDP0000501473 Malus x domestica MDP0000501473 N 0.819
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.819
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.819
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.817
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.812
27955.m000377 Ricinus communis 27955.m000377 N 0.811
PK23097.1 Cannabis sativa PK23097.1 N 0.806
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.806
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.800
MDP0000665847 Malus x domestica MDP0000665847 N 0.795
mgf011994m Mimulus guttatus mgf011994m N 0.795
MDP0000186494 Malus x domestica MDP0000186494 N 0.795
chr3.CM0634.210.nc Lotus japonicus chr3.CM0634.210.nc N 0.789
cassava38069.valid.m1 Manihot esculenta cassava38069.valid.m1 N 0.789
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.787
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.784
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.784
PK22673.1 Cannabis sativa PK22673.1 N 0.784
Medtr3g083820 Medicago truncatula Medtr3g083820 N 0.784
AT2G38610 Arabidopsis thaliana AT2G38610-TAIR-G N 0.782
XM_002881558.1 Arabidopsis lyrata fgenesh2_kg.4__1930__AT2G38610.2 N 0.782
B9I777_POPTR Populus trichocarpa POPTR_0013s15580 N 0.775
ppa009701m Prunus persica ppa009701m N 0.773
mgf005196m Mimulus guttatus mgf005196m N 0.773
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.773
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.773
AT3G08620 Arabidopsis thaliana AT3G08620-TAIR-G N 0.770
Medtr7g080640 Medicago truncatula Medtr7g080640 N 0.763
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.760
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.744
XM_002882529.1 Arabidopsis lyrata fgenesh2_kg.3__864__AT3G08620.1 N 0.743
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.732
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.732
Glyma14g38730.1 Glycine max Glyma14g38730.1 N 0.730
Glyma02g40440.1 Glycine max Glyma02g40440.1 N 0.730
MDP0000268130 Malus x domestica MDP0000268130 N 0.718
MDP0000077753 Malus x domestica MDP0000077753 N 0.718
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.714
GRMZM2G085582 Zea mays GRMZM2G085582 N 0.711
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.711
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.711
LOC_Os01g60260 Oryza sativa LOC_Os01g60260 N 0.707