MDP0000119110 (Malus x domestica)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 MDP0000119110 T21801_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000119110 KH 144 215

Links

Other KH family RBPs
Other Malus x domestica RBPs

61 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MDP0000501473 Malus x domestica MDP0000501473 N 1.000
PK23097.1 Cannabis sativa PK23097.1 N 0.986
MDP0000665847 Malus x domestica MDP0000665847 N 0.973
MDP0000186494 Malus x domestica MDP0000186494 N 0.973
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.972
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.972
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.972
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.958
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.947
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.947
ppa009701m Prunus persica ppa009701m N 0.947
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.933
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.933
27955.m000377 Ricinus communis 27955.m000377 N 0.932
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.931
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.920
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.917
mgf005196m Mimulus guttatus mgf005196m N 0.893
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.892
Medtr7g080640 Medicago truncatula Medtr7g080640 N 0.882
PK22673.1 Cannabis sativa PK22673.1 N 0.880
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.878
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.865
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.861
AT2G38610 Arabidopsis thaliana AT2G38610-TAIR-G N 0.859
XM_002881558.1 Arabidopsis lyrata fgenesh2_kg.4__1930__AT2G38610.2 N 0.859
chr3.CM0634.210.nc Lotus japonicus chr3.CM0634.210.nc N 0.855
AT3G08620 Arabidopsis thaliana AT3G08620-TAIR-G N 0.853
XM_002882529.1 Arabidopsis lyrata fgenesh2_kg.3__864__AT3G08620.1 N 0.840
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.836
SB02G006770 Sorghum bicolor Sb02g006770 N 0.836
Medtr3g083820 Medicago truncatula Medtr3g083820 N 0.827
Glyma14g38730.1 Glycine max Glyma14g38730.1 N 0.827
Glyma02g40440.1 Glycine max Glyma02g40440.1 N 0.827
mgf011994m Mimulus guttatus mgf011994m N 0.822
SB01G003680 Sorghum bicolor Sb01g003680 N 0.822
LOC_Os03g60110 Oryza sativa LOC_Os03g60110 N 0.819
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.819
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.808
B9I777_POPTR Populus trichocarpa POPTR_0013s15580 N 0.806
29945.m000086 Ricinus communis 29945.m000086 N 0.806
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.800
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.795
GRMZM2G063643 Zea mays GRMZM2G063643 N 0.795
BGIOSIBCE013438 Oryza indica BGIOSIBCE013438 N 0.792
cassava38069.valid.m1 Manihot esculenta cassava38069.valid.m1 N 0.792
Medtr5g083520 Medicago truncatula Medtr5g083520 N 0.762
GSVIVG00024534001 Vitis vinifera GSVIVG00024534001 N 0.753
LjSGA_139736.1.1 Lotus japonicus LjSGA_139736.1.1 N 0.741
BRADI1G04120 Brachypodium distachyon BRADI1G04120 N 0.738
GRMZM2G122569 Zea mays GRMZM2G122569 N 0.723
GRMZM2G085582 Zea mays GRMZM2G085582 N 0.723
BGIOSIBCE024206 Oryza indica BGIOSIBCE024206 N 0.720
LOC_Os01g60260 Oryza sativa LOC_Os01g60260 N 0.720
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.714
SB09G023640 Sorghum bicolor Sb09g023640 N 0.711
MDP0000077753 Malus x domestica MDP0000077753 N 0.708
MDP0000268130 Malus x domestica MDP0000268130 N 0.708
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.707
LOC_Os07g12490 Oryza sativa LOC_Os07g12490 N 0.707
SB03G038070 Sorghum bicolor Sb03g038070 N 0.706