PK22673.1 (Cannabis sativa)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 PK22673.1 T17964_0.6 Cannabis sativa genome (2012-Feb-20)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PK22673.1 KH 199 272

Links

Other KH family RBPs
Other Cannabis sativa RBPs

58 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma18g44980.1 Glycine max Glyma18g44980.1 N 0.920
ppa009701m Prunus persica ppa009701m N 0.907
Glyma09g40820.1 Glycine max Glyma09g40820.1 N 0.907
LjT28H07.110.nc Lotus japonicus LjT28H07.110.nc N 0.907
Glyma16g34750.1 Glycine max Glyma16g34750.1 N 0.893
MDP0000186494 Malus x domestica MDP0000186494 N 0.893
Cucsa.130740 Cucumis sativus Cucsa.130740 N 0.893
PK23097.1 Cannabis sativa PK23097.1 N 0.893
MDP0000665847 Malus x domestica MDP0000665847 N 0.893
PDK_20s1595621g003 Phoenix dactylifera PDK_20s1595621g003 N 0.892
cassava39581.m1 Manihot esculenta cassava39581.m1 N 0.880
27955.m000377 Ricinus communis 27955.m000377 N 0.880
Medtr8g005390 Medicago truncatula Medtr8g005390 N 0.880
Medtr8g005290 Medicago truncatula Medtr8g005290 N 0.880
B9IGX2_POPTR Populus trichocarpa POPTR_0006s11210 N 0.880
MDP0000119110 Malus x domestica MDP0000119110 N 0.880
MDP0000501473 Malus x domestica MDP0000501473 N 0.880
Glyma02g40440.1 Glycine max Glyma02g40440.1 N 0.878
Glyma14g38730.1 Glycine max Glyma14g38730.1 N 0.878
B9INJ7_POPTR Populus trichocarpa POPTR_0019s15270 N 0.878
Cucsa.177080 Cucumis sativus Cucsa.177080 N 0.855
Medtr7g080640 Medicago truncatula Medtr7g080640 N 0.855
mgf005196m Mimulus guttatus mgf005196m N 0.853
Medtr3g083820 Medicago truncatula Medtr3g083820 N 0.851
cassava25198.valid.m1 Manihot esculenta cassava25198.valid.m1 N 0.840
chr3.CM0634.210.nc Lotus japonicus chr3.CM0634.210.nc N 0.829
GSVIVG00029865001 Vitis vinifera GSVIVG00029865001 N 0.827
Glyma11g31530.1 Glycine max Glyma11g31530.1 N 0.813
AT3G08620 Arabidopsis thaliana AT3G08620-TAIR-G N 0.811
29945.m000086 Ricinus communis 29945.m000086 N 0.811
XM_002881558.1 Arabidopsis lyrata fgenesh2_kg.4__1930__AT2G38610.2 N 0.808
AT2G38610 Arabidopsis thaliana AT2G38610-TAIR-G N 0.808
Glyma03g00370.1 Glycine max Glyma03g00370.1 N 0.807
SB02G006770 Sorghum bicolor Sb02g006770 N 0.803
GRMZM2G472052 Zea mays GRMZM2G472052 N 0.803
mgf011994m Mimulus guttatus mgf011994m N 0.803
cassava38069.valid.m1 Manihot esculenta cassava38069.valid.m1 N 0.797
XM_002882529.1 Arabidopsis lyrata fgenesh2_kg.3__864__AT3G08620.1 N 0.797
B9I777_POPTR Populus trichocarpa POPTR_0013s15580 N 0.797
LOC_Os03g60110 Oryza sativa LOC_Os03g60110 N 0.784
Glyma18g05680.1 Glycine max Glyma18g05680.1 N 0.771
POPTR_0016s14760 Populus trichocarpa POPTR_0016s14760 N 0.765
SB01G003680 Sorghum bicolor Sb01g003680 N 0.763
GRMZM2G063643 Zea mays GRMZM2G063643 N 0.763
BGIOSIBCE013438 Oryza indica BGIOSIBCE013438 N 0.757
GRMZM2G108677 Zea mays GRMZM2G108677 N 0.750
BRADI2G22090 Brachypodium distachyon BRADI2G22090 N 0.738
GRMZM2G085582 Zea mays GRMZM2G085582 N 0.729
GSVIVG00024534001 Vitis vinifera GSVIVG00024534001 N 0.724
Medtr5g083520 Medicago truncatula Medtr5g083520 N 0.723
LOC_Os05g40290 Oryza sativa LOC_Os05g40290 N 0.718
BGIOSIBCE019437 Oryza indica BGIOSIBCE019437 N 0.718
GRMZM2G122569 Zea mays GRMZM2G122569 N 0.714
SB09G023640 Sorghum bicolor Sb09g023640 N 0.714
BRADI1G53760 Brachypodium distachyon BRADI1G53760 N 0.706
MDP0000077753 Malus x domestica MDP0000077753 N 0.703
MDP0000268130 Malus x domestica MDP0000268130 N 0.703
LjSGA_139736.1.1 Lotus japonicus LjSGA_139736.1.1 N 0.702