amel4_ncbi_hmm7761 (Apis mellifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 amel4_ncbi_hmm7761 T31939_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.893
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
amel4_ncbi_hmm7761 RRM 20 88
amel4_ncbi_hmm7761 RRM 304 374

Links

Other RRM family RBPs
Other Apis mellifera RBPs

57 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRUNOL6 Homo sapiens ENSG00000140488 D 0.786
bru-3 Drosophila melanogaster FBgn0262350 D 0.893
GM24582 Drosophila sechellia FBgn0179445 I 0.893
GL21647 Drosophila persimilis FBgn0159240 I 0.857
GI13095 Drosophila mojavensis FBgn0135852 I 0.886
GH14684 Drosophila grimshawi FBgn0122160 I 0.886
GG13757 Drosophila erecta FBgn0106020 I 0.893
GF10965 Drosophila ananassae FBgn0088005 I 0.893
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.836
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.857
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.793
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.836
BRUNOL4 Taeniopygia guttata ENSTGUG00000001649 I 0.893
CELF3 Tupaia belangeri ENSTBEG00000010130 I 0.707
Brunol4 Rattus norvegicus ENSRNOG00000014503 I 0.893
GD12651 Drosophila simulans FBgn0184378 I 0.893
GJ13842 Drosophila virilis FBgn0201061 I 0.886
Smp_131780 Schistosoma mansoni Smp_131780 I 0.750
Smp_041280 Schistosoma mansoni Smp_041280 I 0.821
BGIBMGA010431 Bombyx mori BGIBMGA010431 I 0.000
Sjc_0024790 Schistosoma japonicum Sjc_0024790 I 0.743
estExt_fgenesh2_pm.C_730008 Branchiostoma floridae estExt_fgenesh2_pm.C_730008 I 0.721
estExt_fgenesh2_pg.C_sca_1310025 Lottia gigantea estExt_fgenesh2_pg.C_sca_1310025 I 0.764
90208 Helobdella robusta 90208 I 0.801
62054 Helobdella robusta 62054 I 0.771
PHUM315130 Pediculus humanus PHUM315130 I 0.900
FBgn0262475 Drosophila melanogaster FBgn0262475 I 0.000
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.879
GE20053 Drosophila yakuba FBgn0237378 I 0.893
GK17101 Drosophila willistoni FBgn0219100 I 0.893
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.786
CELF6 Oryzias latipes ENSORLG00000013392 I 0.857
CELF6 Ochotona princeps ENSOPRG00000019169 I 0.793
CpipJ_CPIJ016329 Culex pipiens CpipJ_CPIJ016329 I 0.000
CELF5 Cavia porcellus ENSCPOG00000005740 I 0.850
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.714
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.786
CELF5 Callithrix jacchus ENSCJAG00000014799 I 0.850
Q2KI16_BOVIN Bos taurus ENSBTAG00000008937 I 0.714
CELF5 Anolis carolinensis ENSACAG00000016959 I 0.836
CPIJ016329 Culex quinquefasciatus CPIJ016329 I 0.000
CJA07020 Caenorhabditis japonica CJA07020 I 0.736
AGAP004950 Anopheles gambiae AGAP004950 I 0.914
nasonia_NCBI_hmm496514 Nasonia vitripennis nasonia_NCBI_hmm496514 I 0.914
CELF5 Gasterosteus aculeatus ENSGACG00000012870 I 0.829
CELF6 Gasterosteus aculeatus ENSGACG00000016626 I 0.857
A5A2G4_CHICK Gallus gallus ENSGALG00000001966 I 0.857
CELF5 Ochotona princeps ENSOPRG00000007881 I 0.807
CELF2 Ornithorhynchus anatinus ENSOANG00000015432 I 0.714
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.864
Celf6 Mus musculus ENSMUSG00000032297 I 0.793
CELF5 Monodelphis domestica ENSMODG00000019151 I 0.843
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.843
HEXA Macaca mulatta ENSMMUG00000010687 I 0.786
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.900
ENSGGOG00000023049 Gorilla gorilla ENSGGOG00000023049 I 0.793
CELF2 Gorilla gorilla ENSGGOG00000009330 I 0.714
CELF5 Gorilla gorilla ENSGGOG00000002078 I 0.837
A5A2G2_CHICK Gallus gallus ENSGALG00000002413 I 0.893
LOAG_05508 Loa loa LOAG_05508 I 0.800
ENSFCAG00000007908 Felis catus ENSFCAG00000007908 N 0.000