MDP0000155133 (Malus x domestica)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 MDP0000155133 T61594_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
eIF-2alpha
M231_0.6 		Drosophila melanogaster WGCAUG RNAcompete
Ray et al.(2013)
RNCMPT00273 		0.724
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000155133 S1 18 92

Links

Other S1 family RBPs
Other Malus x domestica RBPs

244 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PABPN1 Homo sapiens ENSG00000100836 D 0.000
Q9DDY9 Xenopus laevis Q9DDY9 I 0.000
GJ22134 Drosophila virilis FBgn0209248 I 0.000
GD10545 Drosophila simulans FBgn0182316 I 0.000
GM21011 Drosophila sechellia FBgn0175892 I 0.000
GI19259 Drosophila mojavensis FBgn0141998 I 0.000
GH21908 Drosophila grimshawi FBgn0129369 I 0.000
GG23338 Drosophila erecta FBgn0115489 I 0.000
GF13666 Drosophila ananassae FBgn0090694 I 0.000
GA15278-RA Drosophila pseudoobscura FBgn0075302 I 0.000
Pabp2 Drosophila yakuba FBgn0068105 I 0.000
Pabp2 Drosophila melanogaster FBgn0005648 I 0.000
pabpn1 Xenopus tropicalis ENSXETG00000014597 I 0.000
PABPN1L Takifugu rubripes ENSTRUG00000017251 I 0.000
PABPN1L Tetraodon nigroviridis ENSTNIG00000009416 I 0.000
GK23192 Drosophila willistoni FBgn0225154 I 0.000
PHUM037550 Pediculus humanus PHUM037550 I 0.000
Q7ZXB8 Xenopus laevis Q7ZXB8 I 0.000
AAR26262 Xenopus laevis AAR26262 I 0.000
AAH73657 Xenopus laevis AAH73657 I 0.000
AAH45063 Xenopus laevis AAH45063 I 0.000
AAG36902 Xenopus laevis AAG36902 I 0.000
Smp_007630 Schistosoma mansoni Smp_007630 I 0.000
Ame_R020627 Ailuropoda melanoleuca Ame_R020627 I 0.000
BGIBMGA001950 Bombyx mori BGIBMGA001950 I 0.000
gw1.9.516.1 Lottia gigantea gw1.9.516.1 I 0.000
fgenesh2_pm.scaffold_317000002 Branchiostoma floridae fgenesh2_pm.scaffold_317000002 I 0.000
estExt_Genewise1.C_30355 Daphnia pulex estExt_Genewise1.C_30355 I 0.000
e_gw.341.11.1 Branchiostoma floridae e_gw.341.11.1 I 0.000
e_gw1.29.77.1 Phycomyces blakesleeanus e_gw1.29.77.1 I 0.000
e_gw1.14.113.1 Trichoplax adhaerens e_gw1.14.113.1 I 0.000
PABPN1 Sus scrofa ENSSSCG00000002023 I 0.000
Pabpn1 Rattus norvegicus ENSRNOG00000042195 I 0.000
LOC100396934 Callithrix jacchus ENSCJAG00000007960 I 0.000
B2CL2_CANFA Canis familiaris ENSCAFG00000011482 I 0.000
PABP2_BOVIN Bos taurus ENSBTAG00000006884 I 0.000
ENSBTAG00000001853 Bos taurus ENSBTAG00000001853 I 0.000
PABPN1 Anolis carolinensis ENSACAG00000006185 I 0.000
CPIJ004581 Culex quinquefasciatus CPIJ004581 I 0.000
AGAP005117 Anopheles gambiae AGAP005117 I 0.000
AAEL015143 Aedes aegypti AAEL015143 I 0.000
DGIL_AUG5s13013g8t1 Acyrtosiphon pisum DGIL_AUG5s13013g8t1 I 0.000
amel4_ncbi_hmm446 Apis mellifera amel4_ncbi_hmm446 I 0.000
WUBG_04965 Wuchereria bancrofti WUBG_04965 I 0.000
LOAG_03634 Loa loa LOAG_03634 I 0.000
CpipJ_CPIJ004581 Culex pipiens CpipJ_CPIJ004581 I 0.000
PABPN1 Cavia porcellus ENSCPOG00000025574 I 0.000
pabpn1 Danio rerio ENSDARG00000045373 I 0.000
Pabpn1 Dipodomys ordii ENSDORG00000002873 I 0.000
PABPN1 Pteropus vampyrus ENSPVAG00000005270 I 0.000
PABPN1 Pan troglodytes ENSPTRG00000006168 I 0.000
ENSPPYG00000005663 Pongo pygmaeus ENSPPYG00000005663 I 0.000
PABPN1L Oryzias latipes ENSORLG00000005534 I 0.000
PABPN1 Otolemur garnettii ENSOGAG00000008710 I 0.000
PABPN1 Oryctolagus cuniculus ENSOCUG00000016174 I 0.000
PABPN1 Ornithorhynchus anatinus ENSOANG00000009218 I 0.000
Pabpn1 Mus musculus ENSMUSG00000022194 I 0.000
PABPN1 Monodelphis domestica ENSMODG00000004535 I 0.000
PABPN1 Macaca mulatta ENSMMUG00000014747 I 0.000
PABPN1 Loxodonta africana ENSLAFG00000031227 I 0.000
PABPN1 Gorilla gorilla ENSGGOG00000022683 I 0.000
LOC100055599 Equus caballus ENSECAG00000011652 I 0.000
Bm1_48895 Brugia malayi Bm1_48895 I 0.000