HDLBP (Gasterosteus aculeatus)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSGACG00000004648 T18827_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000006151 KH 101 146
ENSGACP00000006151 KH 155 215
ENSGACP00000006151 KH 227 287
ENSGACP00000006151 KH 300 360
ENSGACP00000006151 KH 369 427
ENSGACP00000006151 KH 440 500
ENSGACP00000006151 KH 512 573
ENSGACP00000006151 KH 586 646
ENSGACP00000006151 KH 658 719
ENSGACP00000006151 KH 732 793
ENSGACP00000006151 KH 805 866
ENSGACP00000006151 KH 878 967
ENSGACP00000006151 KH 974 1034
ENSGACP00000006151 KH 1054 1115
ENSGACP00000006151 KH 1127 1184

Links

Other KH family RBPs
Other Gasterosteus aculeatus RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH44314 Xenopus laevis AAH44314 N 0.770
Ame_R011476 Ailuropoda melanoleuca Ame_R011476 N 0.798
ENSACAG00000003606 Anolis carolinensis ENSACAG00000003606 N 0.745
ENSGACG00000019361 Gasterosteus aculeatus ENSGACG00000019361 N 0.710
ENSOANG00000011759 Ornithorhynchus anatinus ENSOANG00000011759 N 0.804
ENSORLG00000006581 Oryzias latipes ENSORLG00000006581 N 0.726
ENSPPYG00000013351 Pongo pygmaeus ENSPPYG00000013351 N 0.783
ENSTNIG00000002555 Tetraodon nigroviridis ENSTNIG00000002555 N 0.716
ENSTRUG00000012888 Takifugu rubripes ENSTRUG00000012888 N 0.723
HDLBP Takifugu rubripes ENSTRUG00000012148 N 0.896
HDLBP Oryzias latipes ENSORLG00000002226 N 0.905
HDLBP Canis familiaris ENSCAFG00000012913 N 0.797
hdlbp Xenopus tropicalis ENSXETG00000012164 N 0.777
HDLBP Pan troglodytes ENSPTRG00000013121 N 0.790
HDLBP Pteropus vampyrus ENSPVAG00000000555 N 0.783
Hdlbp Rattus norvegicus ENSRNOG00000031479 N 0.797
HDLBP Tetraodon nigroviridis ENSTNIG00000004185 N 0.891
HDLBP Ochotona princeps ENSOPRG00000011965 N 0.792
HDLBP Oryctolagus cuniculus ENSOCUG00000012667 N 0.793
hdlbp Danio rerio ENSDARG00000009830 N 0.895
HDLBP Felis catus ENSFCAG00000010455 N 0.733
HDLBP Homo sapiens ENSG00000115677 N 0.791
HDLBP Gorilla gorilla ENSGGOG00000004392 N 0.791
HDLBP Loxodonta africana ENSLAFG00000014826 N 0.789
HDLBP Meleagris gallopavo ENSMGAG00000003686 N 0.814
HDLBP Myotis lucifugus ENSMLUG00000005628 N 0.766
HDLBP Monodelphis domestica ENSMODG00000016033 N 0.806
Hdlbp Mus musculus ENSMUSG00000034088 N 0.797
HDLBP Callithrix jacchus ENSCJAG00000006152 N 0.785
HDLBP Cavia porcellus ENSCPOG00000006297 N 0.793
LOC100057882 Equus caballus ENSECAG00000012829 N 0.790
VIGLN_CHICK Gallus gallus ENSGALG00000005823 N 0.815