CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MEX3A
(
Taeniopygia guttata
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSTGUG00000003692
T19570_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000003799
KH
7
50
IQGCKIKALRAKTNTYIKTPVRGEEPVFMVTGRREDVAMARREI
ENSTGUP00000003799
KH
82
141
TIRVRVPYRVVGLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEI
Links
Other
KH
family RBPs
Other
Taeniopygia guttata
RBPs
126 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
156918
Helobdella robusta
156918
I
0.000
AAEL015143
Aedes aegypti
AAEL015143
I
0.000
AAG36902
Xenopus laevis
AAG36902
I
0.000
AAH45063
Xenopus laevis
AAH45063
I
0.000
AAH73657
Xenopus laevis
AAH73657
I
0.000
AAR26262
Xenopus laevis
AAR26262
I
0.000
AGAP005117
Anopheles gambiae
AGAP005117
I
0.000
amel4_ncbi_hmm446
Apis mellifera
amel4_ncbi_hmm446
I
0.000
Ame_R020627
Ailuropoda melanoleuca
Ame_R020627
I
0.000
B2CL2_CANFA
Canis familiaris
ENSCAFG00000011482
I
0.000
BGIBMGA001950
Bombyx mori
BGIBMGA001950
I
0.000
Bm1_48895
Brugia malayi
Bm1_48895
I
0.000
CBG03741
Caenorhabditis briggsae
CBG03741
I
0.000
CBN00953
Caenorhabditis brenneri
CBN00953
I
0.000
CBN10290
Caenorhabditis brenneri
CBN10290
I
0.000
CPIJ004581
Culex quinquefasciatus
CPIJ004581
I
0.000
CpipJ_CPIJ004581
Culex pipiens
CpipJ_CPIJ004581
I
0.000
CRE07990
Caenorhabditis remanei
CRE07990
I
0.000
DGIL_AUG5s13013g8t1
Acyrtosiphon pisum
DGIL_AUG5s13013g8t1
I
0.000
EDP44971.1
Malassezia globosa
EDP44971.1
N
0.000
ENSBTAG00000001853
Bos taurus
ENSBTAG00000001853
I
0.000
ENSEEUG00000012973
Erinaceus europaeus
ENSEEUG00000012973
I
0.000
ENSOCUG00000008701
Oryctolagus cuniculus
ENSOCUG00000008701
I
0.000
ENSPPYG00000005663
Pongo pygmaeus
ENSPPYG00000005663
I
0.000
estExt_Genewise1.C_30355
Daphnia pulex
estExt_Genewise1.C_30355
I
0.000
estExt_Genewise1Plus.C_2670068
Capitella teleta
estExt_Genewise1Plus.C_2670068
I
0.000
e_gw.341.11.1
Branchiostoma floridae
e_gw.341.11.1
I
0.000
e_gw1.14.113.1
Trichoplax adhaerens
e_gw1.14.113.1
I
0.000
e_gw1.29.77.1
Phycomyces blakesleeanus
e_gw1.29.77.1
I
0.000
fgenesh2_pm.scaffold_317000002
Branchiostoma floridae
fgenesh2_pm.scaffold_317000002
I
0.000
GA15278-RA
Drosophila pseudoobscura
FBgn0075302
I
0.000
GD10545
Drosophila simulans
FBgn0182316
I
0.000
GF13666
Drosophila ananassae
FBgn0090694
I
0.000
GG23338
Drosophila erecta
FBgn0115489
I
0.000
GH21908
Drosophila grimshawi
FBgn0129369
I
0.000
GI19259
Drosophila mojavensis
FBgn0141998
I
0.000
GJ22134
Drosophila virilis
FBgn0209248
I
0.000
GK23192
Drosophila willistoni
FBgn0225154
I
0.000
GL17107
Drosophila persimilis
FBgn0154711
I
0.000
GM21011
Drosophila sechellia
FBgn0175892
I
0.000
gw1.9.516.1
Lottia gigantea
gw1.9.516.1
I
0.000
LOAG_03634
Loa loa
LOAG_03634
I
0.000
LOC100055599
Equus caballus
ENSECAG00000011652
I
0.000
LOC100396934
Callithrix jacchus
ENSCJAG00000007960
I
0.000
Pabp2
Drosophila melanogaster
FBgn0005648
I
0.000
Pabp2
Drosophila yakuba
FBgn0068105
I
0.000
PABP2_BOVIN
Bos taurus
ENSBTAG00000006884
I
0.000
PABPN1
Pteropus vampyrus
ENSPVAG00000005270
I
0.000
PABPN1
Cavia porcellus
ENSCPOG00000025574
I
0.000
pabpn1
Danio rerio
ENSDARG00000045373
I
0.000
Pabpn1
Dipodomys ordii
ENSDORG00000002873
I
0.000
PABPN1
Anolis carolinensis
ENSACAG00000006185
I
0.000
PABPN1
Homo sapiens
ENSG00000100836
D
0.000
PABPN1
Gasterosteus aculeatus
ENSGACG00000002167
I
0.000
PABPN1
Otolemur garnettii
ENSOGAG00000008710
I
0.000
PABPN1
Ornithorhynchus anatinus
ENSOANG00000009218
I
0.000
PABPN1
Macaca mulatta
ENSMMUG00000014747
I
0.000
PABPN1
Myotis lucifugus
ENSMLUG00000012452
I
0.000
PABPN1
Oryctolagus cuniculus
ENSOCUG00000016174
I
0.000
PABPN1
Oryzias latipes
ENSORLG00000006136
I
0.000
PABPN1
Loxodonta africana
ENSLAFG00000031227
I
0.000
PABPN1
Pan troglodytes
ENSPTRG00000006168
I
0.000
PABPN1
Gorilla gorilla
ENSGGOG00000022683
I
0.000
Pabpn1
Rattus norvegicus
ENSRNOG00000042195
I
0.000
PABPN1
Monodelphis domestica
ENSMODG00000004535
I
0.000
pabpn1
Xenopus tropicalis
ENSXETG00000014597
I
0.000
PABPN1
Takifugu rubripes
ENSTRUG00000006554
I
0.000
PABPN1
Tetraodon nigroviridis
ENSTNIG00000005369
I
0.000
PABPN1
Sus scrofa
ENSSSCG00000002023
I
0.000
Pabpn1
Mus musculus
ENSMUSG00000022194
I
0.000
PHUM037550
Pediculus humanus
PHUM037550
I
0.000
Q7ZXB8
Xenopus laevis
Q7ZXB8
I
0.000
Q9DDY9
Xenopus laevis
Q9DDY9
I
0.000
Sjc_0053490
Schistosoma japonicum
Sjc_0053490
I
0.000
Smp_007630
Schistosoma mansoni
Smp_007630
I
0.000
WUBG_04965
Wuchereria bancrofti
WUBG_04965
I
0.000
XP_002163300.1
Hydra magnipapillata
XP_002163300.1
I
0.000