BRADI2G06650 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI2G06650 T33181_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI2G06650.1 RRM 127 194
BRADI2G06650.1 RRM 224 292

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

69 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
29485.m000140 Ricinus communis 29485.m000140 N 0.766
29650.m000268 Ricinus communis 29650.m000268 N 0.745
30068.m002593 Ricinus communis 30068.m002593 N 0.781
ATRBP37 Arabidopsis thaliana AT4G10610-TAIR-G N 0.745
BGIOSIBCE006292 Oryza indica BGIOSIBCE006292 N 0.788
BGIOSIBCE022210 Oryza indica BGIOSIBCE022210 N 0.723
BGIOSIBCE026288 Oryza indica BGIOSIBCE026288 N 0.781
BRADI1G39150 Brachypodium distachyon BRADI1G39150 N 0.752
BRADI3G09250 Brachypodium distachyon BRADI3G09250 N 0.774
BRADI3G13740 Brachypodium distachyon BRADI3G13740 N 0.759
cassava23841.valid.m1 Manihot esculenta cassava23841.valid.m1 N 0.766
cassava37978.valid.m1 Manihot esculenta cassava37978.valid.m1 N 0.759
cassava37979.valid.m1 Manihot esculenta cassava37979.valid.m1 N 0.759
cassava38063.valid.m1 Manihot esculenta cassava38063.valid.m1 N 0.759
cassava38064.valid.m1 Manihot esculenta cassava38064.valid.m1 N 0.759
cassava38065.valid.m1 Manihot esculenta cassava38065.valid.m1 N 0.759
cassava41363.m1 Manihot esculenta cassava41363.m1 N 0.759
cassava41364.m1 Manihot esculenta cassava41364.m1 N 0.759
cassava43127.valid.m1 Manihot esculenta cassava43127.valid.m1 N 0.781
chr3.CM0059.50.nd Lotus japonicus chr3.CM0059.50.nd N 0.752
CID10 Arabidopsis thaliana AT3G49390-TAIR-G N 0.708
CID11 Arabidopsis thaliana AT1G32790-TAIR-G N 0.788
CID8 Arabidopsis thaliana AT1G53650-TAIR-G N 0.723
CID9 Arabidopsis thaliana AT3G14450-TAIR-G N 0.737
Cucsa.273320 Cucumis sativus Cucsa.273320 N 0.766
estExt_Genewise1.C_1960042 Physcomitrella patens estExt_Genewise1.C_1960042 N 0.774
e_gw1.62.48.1 Physcomitrella patens e_gw1.62.48.1 N 0.774
Glyma04g40750.1 Glycine max Glyma04g40750.1 N 0.752
Glyma04g40760.1 Glycine max Glyma04g40760.1 N 0.752
Glyma06g14030.1 Glycine max Glyma06g14030.1 N 0.766
Glyma06g14050.1 Glycine max Glyma06g14050.1 N 0.752
Glyma08g18810.1 Glycine max Glyma08g18810.1 N 0.781
Glyma15g40060.1 Glycine max Glyma15g40060.1 N 0.774
GRMZM2G029058 Zea mays GRMZM2G029058 N 0.759
GRMZM2G051043 Zea mays GRMZM2G051043 N 0.927
GRMZM2G069102 Zea mays GRMZM2G069102 N 0.774
GRMZM2G069816 Zea mays GRMZM2G069816 N 0.927
GRMZM2G118590 Zea mays GRMZM2G118590 N 0.730
GRMZM2G173428 Zea mays GRMZM2G173428 N 0.788
GRMZM2G349794 Zea mays GRMZM2G349794 N 0.701
GSVIVG00001961001 Vitis vinifera GSVIVG00001961001 N 0.781
GSVIVG00019674001 Vitis vinifera GSVIVG00019674001 N 0.759
GSVIVG00038633001 Vitis vinifera GSVIVG00038633001 N 0.788
gw1.10.957.1 Selaginella moellendorfii gw1.10.957.1 N 0.781
gw1.29.636.1 Selaginella moellendorfii gw1.29.636.1 N 0.781
LOC_Os01g11120 Oryza sativa LOC_Os01g11120 N 0.934
LOC_Os02g14760 Oryza sativa LOC_Os02g14760 N 0.788
LOC_Os06g35030 Oryza sativa LOC_Os06g35030 N 0.745
LOC_Os08g02330 Oryza sativa LOC_Os08g02330 N 0.781
MDP0000233630 Malus x domestica MDP0000233630 N 0.759
Medtr3g122880 Medicago truncatula Medtr3g122880 N 0.737
Medtr3g122920 Medicago truncatula Medtr3g122920 N 0.745
mgf012896m Mimulus guttatus mgf012896m N 0.766
mgf013366m Mimulus guttatus mgf013366m N 0.766
PDK_20s1822231g001 Phoenix dactylifera PDK_20s1822231g001 N 0.803
PK04894.1 Cannabis sativa PK04894.1 N 0.774
PK12463.1 Cannabis sativa PK12463.1 N 0.781
PK28889.1 Cannabis sativa PK28889.1 N 0.781
ppa006808m Prunus persica ppa006808m N 0.759
ppa009298m Prunus persica ppa009298m N 0.796
SB03G002180 Sorghum bicolor Sb03g002180 N 0.934
Sb04g008740 Sorghum bicolor Sb04g008740 N 0.774
SB07G001560 Sorghum bicolor Sb07g001560 N 0.788
SB10G021290 Sorghum bicolor Sb10g021290 N 0.737
XM_002872481.1 Arabidopsis lyrata fgenesh2_kg.6__3042__AT4G10610.1 N 0.745
XM_002877626.1 Arabidopsis lyrata fgenesh2_kg.5__1290__AT3G49390.2 N 0.708
XM_002882834.1 Arabidopsis lyrata fgenesh2_kg.3__1570__AT3G14450.1 N 0.745
XM_002893696.1 Arabidopsis lyrata fgenesh2_kg.1__3419__AT1G32790.2 N 0.788
XM_002894411.1 Arabidopsis lyrata Al_scaffold_0001_4812 N 0.730