CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AMAG_15989
(
Allomyces macrogynus
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
AMAG_15989
T01191_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AMAG_15989T0
CCCH ZF
341
367
YKTELCRSYEETGACRYGPKCQFAHSP
AMAG_15989T0
CCCH ZF
379
405
YKTEICRTFHEQGWCPYGRRCCFIHND
Links
Other
CCCH ZF
family RBPs
Other
Allomyces macrogynus
RBPs
145 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Gm7964
Dipodomys ordii
ENSDORG00000016024
N
0.000
ENSGGOG00000027874
Gorilla gorilla
ENSGGOG00000027874
N
0.000