XM_002877876.1 (Arabidopsis lyrata)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		fgenesh1_pm.C_scaffold_5001437 T07373_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_5001437 RRM 13 75
fgenesh1_pm.C_scaffold_5001437 CCHC ZF 99 116
fgenesh1_pm.C_scaffold_5001437 CCHC ZF 121 138

Links

Other CCHC ZF,RRM family RBPs
Other Arabidopsis lyrata RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSPCAG00000007096 Procavia capensis ENSPCAG00000007096 N 0.000