BRADI2G34687 (Brachypodium distachyon)
CCHC ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00076 (RRM_1) 		IPR001878
IPR000504 		BRADI2G34687 T07181_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI2G34687.1 RRM 41 103
BRADI2G34687.1 CCHC ZF 130 147
BRADI2G34687.1 CCHC ZF 152 169

Links

Other CCHC ZF,RRM family RBPs
Other Brachypodium distachyon RBPs

36 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os03g17710 Oryza sativa LOC_Os03g17710 N 0.838
BRADI2G37640 Brachypodium distachyon BRADI2G37640 N 0.838
GSVIVG00032633001 Vitis vinifera GSVIVG00032633001 N 0.838
SB09G001910 Sorghum bicolor Sb09g001910 N 0.818
At-RS2Z Arabidopsis thaliana AT3G53500-TAIR-G N 0.818
chr1.CM0033.20.nd Lotus japonicus chr1.CM0033.20.nd N 0.818
LjT38D03.70.nd Lotus japonicus LjT38D03.70.nd N 0.818
Glyma03g33270.1 Glycine max Glyma03g33270.1 N 0.808
AC235022_4 Medicago truncatula AC235022_4 N 0.808
cassava28871.valid.m1 Manihot esculenta cassava28871.valid.m1 N 0.808
GRMZM2G474658 Zea mays GRMZM2G474658 N 0.808
GRMZM2G175419 Zea mays GRMZM2G175419 N 0.808
cassava28872.valid.m1 Manihot esculenta cassava28872.valid.m1 N 0.808
BGIOSIBCE017351 Oryza indica BGIOSIBCE017351 N 0.808
BRADI2G00370 Brachypodium distachyon BRADI2G00370 N 0.808
LOC_Os05g02880 Oryza sativa LOC_Os05g02880 N 0.808
XM_002877876.1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001437 N 0.808
RS2Z33 Arabidopsis thaliana AT2G37340-TAIR-G N 0.798
GRMZM2G099186 Zea mays GRMZM2G099186 N 0.798
29805.m001527 Ricinus communis 29805.m001527 N 0.798
Glyma19g35990.1 Glycine max Glyma19g35990.1 N 0.798
Sb09g001920 Sorghum bicolor Sb09g001920 N 0.798
BGIOSIBCE000441 Oryza indica BGIOSIBCE000441 N 0.788
LOC_Os01g06290 Oryza sativa LOC_Os01g06290 N 0.788
B9IIW9_POPTR Populus trichocarpa POPTR_0016s08250 N 0.788
GRMZM2G099317 Zea mays GRMZM2G099317 N 0.788
PK26144.1 Cannabis sativa PK26144.1 N 0.778
ppa009074m Prunus persica ppa009074m N 0.778
Glyma19g35980.1 Glycine max Glyma19g35980.1 N 0.778
A9PGS4_POPTR Populus trichocarpa POPTR_0006s23170 N 0.778
SB03G005500 Sorghum bicolor Sb03g005500 N 0.778
Glyma03g33260.1 Glycine max Glyma03g33260.1 N 0.778
mgf009930m Mimulus guttatus mgf009930m N 0.778
cassava441.valid.m1 Manihot esculenta cassava441.valid.m1 N 0.768
ppa009294m Prunus persica ppa009294m N 0.768
LjT38D03.80.nd Lotus japonicus LjT38D03.80.nd N 0.737