nasonia_NCBI_hmm368623 (Nasonia vitripennis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 nasonia_NCBI_hmm368623 T32226_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
B52
M334_0.6 		Drosophila melanogaster GRUCAACCNGGCGACMG SELEX
Cook et al.(2011)
802_9111335 		0.822
B52
M126_0.6 		Drosophila melanogaster GGASGRV RNAcompete
Ray et al.(2013)
RNCMPT00134 		0.822
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
nasonia_NCBI_hmm368623 RRM 5 67
nasonia_NCBI_hmm368623 RRM 108 173

Links

Other RRM family RBPs
Other Nasonia vitripennis RBPs

87 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002871058.1 Arabidopsis lyrata scaffold_600404.1 N 0.000
Cucsa.364800 Cucumis sativus Cucsa.364800 N 0.000
MDP0000340057 Malus x domestica MDP0000340057 N 0.000
Medtr8g129780 Medicago truncatula Medtr8g129780 N 0.000
Medtr1g137330 Medicago truncatula Medtr1g137330 N 0.000
LOC_Os08g31810 Oryza sativa LOC_Os08g31810 N 0.000
B9HW06_POPTR Populus trichocarpa POPTR_0010s24120 N 0.000
ppa025985m Prunus persica ppa025985m N 0.000
29428.m000321 Ricinus communis 29428.m000321 N 0.000
GSVIVG00021851001 Vitis vinifera GSVIVG00021851001 N 0.000