BRADI3G09250 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI3G09250 T33221_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G09250.1 RRM 167 234
BRADI3G09250.1 RRM 264 332

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

69 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002882834.1 Arabidopsis lyrata fgenesh2_kg.3__1570__AT3G14450.1 N 0.752
XM_002872481.1 Arabidopsis lyrata fgenesh2_kg.6__3042__AT4G10610.1 N 0.730
XM_002877626.1 Arabidopsis lyrata fgenesh2_kg.5__1290__AT3G49390.2 N 0.715
XM_002894411.1 Arabidopsis lyrata Al_scaffold_0001_4812 N 0.759
XM_002893696.1 Arabidopsis lyrata fgenesh2_kg.1__3419__AT1G32790.2 N 0.774
ATRBP37 Arabidopsis thaliana AT4G10610-TAIR-G N 0.730
CID10 Arabidopsis thaliana AT3G49390-TAIR-G N 0.715
CID9 Arabidopsis thaliana AT3G14450-TAIR-G N 0.737
CID8 Arabidopsis thaliana AT1G53650-TAIR-G N 0.752
CID11 Arabidopsis thaliana AT1G32790-TAIR-G N 0.774
BRADI3G13740 Brachypodium distachyon BRADI3G13740 N 0.730
BRADI1G39150 Brachypodium distachyon BRADI1G39150 N 0.832
BRADI2G06650 Brachypodium distachyon BRADI2G06650 N 0.774
PK04894.1 Cannabis sativa PK04894.1 N 0.781
PK28889.1 Cannabis sativa PK28889.1 N 0.766
PK12463.1 Cannabis sativa PK12463.1 N 0.774
Cucsa.273320 Cucumis sativus Cucsa.273320 N 0.766
Glyma15g40060.1 Glycine max Glyma15g40060.1 N 0.745
Glyma04g40750.1 Glycine max Glyma04g40750.1 N 0.737
Glyma04g40760.1 Glycine max Glyma04g40760.1 N 0.752
Glyma06g14030.1 Glycine max Glyma06g14030.1 N 0.759
Glyma06g14050.1 Glycine max Glyma06g14050.1 N 0.752
Glyma08g18810.1 Glycine max Glyma08g18810.1 N 0.737
chr3.CM0059.50.nd Lotus japonicus chr3.CM0059.50.nd N 0.723
MDP0000233630 Malus x domestica MDP0000233630 N 0.781
cassava37979.valid.m1 Manihot esculenta cassava37979.valid.m1 N 0.781
cassava38063.valid.m1 Manihot esculenta cassava38063.valid.m1 N 0.781
cassava38064.valid.m1 Manihot esculenta cassava38064.valid.m1 N 0.781
cassava38065.valid.m1 Manihot esculenta cassava38065.valid.m1 N 0.781
cassava41363.m1 Manihot esculenta cassava41363.m1 N 0.781
cassava41364.m1 Manihot esculenta cassava41364.m1 N 0.781
cassava43127.valid.m1 Manihot esculenta cassava43127.valid.m1 N 0.788
cassava37978.valid.m1 Manihot esculenta cassava37978.valid.m1 N 0.781
cassava23841.valid.m1 Manihot esculenta cassava23841.valid.m1 N 0.774
Medtr3g122880 Medicago truncatula Medtr3g122880 N 0.752
Medtr3g122920 Medicago truncatula Medtr3g122920 N 0.723
mgf012896m Mimulus guttatus mgf012896m N 0.745
mgf013366m Mimulus guttatus mgf013366m N 0.752
BGIOSIBCE026288 Oryza indica BGIOSIBCE026288 N 0.752
BGIOSIBCE006292 Oryza indica BGIOSIBCE006292 N 0.942
BGIOSIBCE022210 Oryza indica BGIOSIBCE022210 N 0.818
LOC_Os01g11120 Oryza sativa LOC_Os01g11120 N 0.781
LOC_Os06g35030 Oryza sativa LOC_Os06g35030 N 0.832
LOC_Os08g02330 Oryza sativa LOC_Os08g02330 N 0.752
LOC_Os02g14760 Oryza sativa LOC_Os02g14760 N 0.942
PDK_20s1822231g001 Phoenix dactylifera PDK_20s1822231g001 N 0.781
estExt_Genewise1.C_1960042 Physcomitrella patens estExt_Genewise1.C_1960042 N 0.766
e_gw1.62.48.1 Physcomitrella patens e_gw1.62.48.1 N 0.766
ppa006808m Prunus persica ppa006808m N 0.774
ppa009298m Prunus persica ppa009298m N 0.796
29485.m000140 Ricinus communis 29485.m000140 N 0.788
29650.m000268 Ricinus communis 29650.m000268 N 0.737
30068.m002593 Ricinus communis 30068.m002593 N 0.788
gw1.29.636.1 Selaginella moellendorfii gw1.29.636.1 N 0.766
gw1.10.957.1 Selaginella moellendorfii gw1.10.957.1 N 0.766
SB10G021290 Sorghum bicolor Sb10g021290 N 0.818
SB07G001560 Sorghum bicolor Sb07g001560 N 0.759
Sb04g008740 Sorghum bicolor Sb04g008740 N 0.905
SB03G002180 Sorghum bicolor Sb03g002180 N 0.737
GSVIVG00038633001 Vitis vinifera GSVIVG00038633001 N 0.781
GSVIVG00001961001 Vitis vinifera GSVIVG00001961001 N 0.796
GSVIVG00019674001 Vitis vinifera GSVIVG00019674001 N 0.781
GRMZM2G349794 Zea mays GRMZM2G349794 N 0.701
GRMZM2G118590 Zea mays GRMZM2G118590 N 0.818
GRMZM2G069816 Zea mays GRMZM2G069816 N 0.730
GRMZM2G069102 Zea mays GRMZM2G069102 N 0.759
GRMZM2G051043 Zea mays GRMZM2G051043 N 0.737
GRMZM2G029058 Zea mays GRMZM2G029058 N 0.869
GRMZM2G173428 Zea mays GRMZM2G173428 N 0.759