HNRNPF (Sorex araneus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSARG00000010059 T41347_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPH2
M151_0.6 		Homo sapiens GGGAGGG RNAcompete
Ray et al.(2013)
RNCMPT00160 		0.843
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000009098 RRM 13 84
ENSSARP00000009098 RRM 113 182
ENSSARP00000009098 RRM 291 358

Links

Other RRM family RBPs
Other Sorex araneus RBPs

92 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R005224 Ailuropoda melanoleuca Ame_R005224 I 0.990
Ame_R018226 Ailuropoda melanoleuca Ame_R018226 I 0.848
Ame_R009346 Ailuropoda melanoleuca Ame_R009346 I 0.871
ENSACAG00000016323 Anolis carolinensis ENSACAG00000016323 I 0.833
HNRNPH1 Bos taurus ENSBTAG00000009389 I 0.871
HNRPF_BOVIN Bos taurus ENSBTAG00000008853 I 0.986
HNRH2_BOVIN Bos taurus ENSBTAG00000007499 I 0.848
HNRNPH1 Callithrix jacchus ENSCJAG00000009931 I 0.871
HNRNPH2 Callithrix jacchus ENSCJAG00000004908 I 0.843
HNRNPF Callithrix jacchus ENSCJAG00000016238 I 0.990
HNRNPH2 Canis familiaris ENSCAFG00000017693 I 0.848
HNRNPF Canis familiaris ENSCAFG00000007044 I 0.990
HNRNPH1 Canis familiaris ENSCAFG00000000336 I 0.871
HNRNPH2 Cavia porcellus ENSCPOG00000012405 I 0.848
HNRNPF Cavia porcellus ENSCPOG00000003678 I 0.986
HNRNPH1 Cavia porcellus ENSCPOG00000001485 I 0.871
ENSCHOG00000003841 Choloepus hoffmanni ENSCHOG00000003841 I 0.790
hnrnph1l Danio rerio ENSDARG00000005551 I 0.833
HNRNPH3 Danio rerio ENSDARG00000039466 I 0.724
Hnrnph1 Dipodomys ordii ENSDORG00000005453 I 0.871
ENSDORG00000005431 Dipodomys ordii ENSDORG00000005431 I 0.990
HNRNPH2 Echinops telfairi ENSETEG00000008416 I 0.848
HNRNPH1 Echinops telfairi ENSETEG00000011303 I 0.857
LOC100067495 Equus caballus ENSECAG00000014429 I 0.790
LOC100050002 Equus caballus ENSECAG00000003229 I 0.990
LOC100057665 Equus caballus ENSECAG00000023575 I 0.848
HNRNPH2 Felis catus ENSFCAG00000015400 I 0.800
HNRNPH1 Felis catus ENSFCAG00000001204 I 0.767
HNRNPF Felis catus ENSFCAG00000006794 N 0.771
Q5F3I8_CHICK Gallus gallus ENSGALG00000005955 I 0.871
HNRNPH1 Gasterosteus aculeatus ENSGACG00000018352 I 0.814
HNRNPH3 Gasterosteus aculeatus ENSGACG00000016118 I 0.724
HNRNPH2 Gorilla gorilla ENSGGOG00000008096 I 0.843
HNRNPF Gorilla gorilla ENSGGOG00000010867 I 0.986
HNRNPH1 Gorilla gorilla ENSGGOG00000025844 I 0.871
HNRNPH2 Homo sapiens ENSG00000126945 D 0.843
HNRNPH1 Homo sapiens ENSG00000169045 I 0.871
HNRNPF Homo sapiens ENSG00000169813 I 0.986
HNRNPF Loxodonta africana ENSLAFG00000000424 I 0.971
HNRNPH1 Loxodonta africana ENSLAFG00000015766 I 0.881
HNRNPH2 Macaca mulatta ENSMMUG00000019580 I 0.843
HNRNPF Macaca mulatta ENSMMUG00000020982 I 0.986
ENSMMUG00000017392 Macaca mulatta ENSMMUG00000017392 I 0.724
ENSMGAG00000007328 Meleagris gallopavo ENSMGAG00000007328 I 0.871
ENSMICG00000014218 Microcebus murinus ENSMICG00000014218 I 0.943
HNRNPF Microcebus murinus ENSMICG00000001490 I 0.986
ENSMODG00000009436 Monodelphis domestica ENSMODG00000009436 I 0.867
Hnrnph2 Mus musculus ENSMUSG00000045427 I 0.857
Hnrnpf Mus musculus ENSMUSG00000042079 I 0.995
Hnrnph1 Mus musculus ENSMUSG00000007850 I 0.871
HNRNPF Myotis lucifugus ENSMLUG00000007261 I 0.848
HNRNPH2 Ochotona princeps ENSOPRG00000007985 I 0.848
ENSOANG00000010222 Ornithorhynchus anatinus ENSOANG00000010222 I 0.867
ENSOCUG00000024719 Oryctolagus cuniculus ENSOCUG00000024719 I 0.995
ENSOCUG00000010629 Oryctolagus cuniculus ENSOCUG00000010629 I 0.848
HNRNPH1 Oryctolagus cuniculus ENSOCUG00000017150 I 0.871
ENSOCUG00000006387 Oryctolagus cuniculus ENSOCUG00000006387 I 0.848
ENSOCUG00000024604 Oryctolagus cuniculus ENSOCUG00000024604 I 0.919
HNRNPH1 Oryzias latipes ENSORLG00000006932 I 0.795
HNRNPH3 Oryzias latipes ENSORLG00000010499 I 0.719
HNRNPF Otolemur garnettii ENSOGAG00000013734 I 0.986
HNRNPH1 Otolemur garnettii ENSOGAG00000012631 I 0.767
HNRNPH2 Pan troglodytes ENSPTRG00000022107 I 0.843
HNRNPH1 Pan troglodytes ENSPTRG00000017617 I 0.871
HNRNPF Pan troglodytes ENSPTRG00000002446 I 0.986
ENSPPYG00000020553 Pongo pygmaeus ENSPPYG00000020553 I 0.843
ENSPPYG00000016121 Pongo pygmaeus ENSPPYG00000016121 I 0.871
ENSPPYG00000002212 Pongo pygmaeus ENSPPYG00000002212 I 0.986
HNRNPH2 Procavia capensis ENSPCAG00000003333 I 0.848
HNRNPF Procavia capensis ENSPCAG00000013169 I 0.962
HNRNPH2 Pteropus vampyrus ENSPVAG00000001571 I 0.848
HNRNPF Pteropus vampyrus ENSPVAG00000011646 I 0.971
ENSRNOG00000015533 Rattus norvegicus ENSRNOG00000015533 I 0.862
Hnrph1 Rattus norvegicus ENSRNOG00000003399 I 0.871
Hnrnph2 Rattus norvegicus ENSRNOG00000011661 I 0.857
Hnrnpf Rattus norvegicus ENSRNOG00000014562 I 0.995
HNRNPH1 Sorex araneus ENSSARG00000003024 I 0.781
HNRNPH2 Sorex araneus ENSSARG00000014182 I 0.848
HNRNPH1 Sus scrofa ENSSSCG00000014022 I 0.871
HNRNPF Sus scrofa ENSSSCG00000010203 I 0.981
HNRNPH1 Taeniopygia guttata ENSTGUG00000001085 I 0.786
HNRNPH1 Takifugu rubripes ENSTRUG00000001031 I 0.810
HNRNPH3 Takifugu rubripes ENSTRUG00000005350 I 0.729
HNRNPH1 Tarsius syrichta ENSTSYG00000006417 I 0.790
HNRNPH2 Tarsius syrichta ENSTSYG00000007811 I 0.848
HNRNPH3 Tetraodon nigroviridis ENSTNIG00000013788 I 0.738
HNRNPH2 Tursiops truncatus ENSTTRG00000012786 I 0.848
HNRNPH1 Tursiops truncatus ENSTTRG00000000470 I 0.771
AAH70969 Xenopus laevis AAH70969 I 0.814
AAH77770 Xenopus laevis AAH77770 I 0.824
AAI10708 Xenopus laevis AAI10708 I 0.824
hnrnph2 Xenopus tropicalis ENSXETG00000018321 I 0.829