CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MEX3C
(
Canis familiaris
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSCAFG00000000162
T18453_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
CG11360
M122_0.6
Drosophila melanogaster
GAGUDW
RNAcompete
Ray et al.(2013)
RNCMPT00129
0.844
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000000237
KH
13
72
TECVPVPRYHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPIFVVTGRKEDVAMAKREI
ENSCAFP00000000237
KH
107
166
TVQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEI
Links
Other
KH
family RBPs
Other
Canis familiaris
RBPs
162 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MEX3C
Loxodonta africana
ENSLAFG00000027818
I
0.975
Mex3c
Rattus norvegicus
ENSRNOG00000015777
I
0.975
MEX3C
Pteropus vampyrus
ENSPVAG00000015135
I
0.975
MEX3C
Dasypus novemcinctus
ENSDNOG00000006544
I
0.975
MEX3C
Gorilla gorilla
ENSGGOG00000014875
I
0.975
MEX3C
Equus caballus
ENSECAG00000021727
I
0.975
MEX3C
Homo sapiens
ENSG00000176624
I
0.975
MEX3C
Tursiops truncatus
ENSTTRG00000004570
I
0.975
Ame_R004658
Ailuropoda melanoleuca
Ame_R004658
I
0.975
ENSOCUG00000012549
Oryctolagus cuniculus
ENSOCUG00000012549
I
0.975
MEX3C
Pan troglodytes
ENSPTRG00000010029
I
0.975
MEX3C
Monodelphis domestica
ENSMODG00000011001
I
0.975
LOC100410023
Callithrix jacchus
ENSCJAG00000001902
I
0.975
MEX3C
Choloepus hoffmanni
ENSCHOG00000004915
I
0.975
MEX3C
Cavia porcellus
ENSCPOG00000009646
I
0.975
Mex3c
Mus musculus
ENSMUSG00000037253
I
0.975
MEX3C
Macaca mulatta
ENSMMUG00000023652
I
0.975
MEX3C
Procavia capensis
ENSPCAG00000009258
I
0.967
estExt_fgenesh2_pg.C_2010087
Branchiostoma floridae
estExt_fgenesh2_pg.C_2010087
I
0.959
MEX3B
Ochotona princeps
ENSOPRG00000009604
I
0.950
MEX3B
Gorilla gorilla
ENSGGOG00000000597
I
0.950
MEX3B
Macaca mulatta
ENSMMUG00000018639
I
0.950
ENSPPYG00000006723
Pongo pygmaeus
ENSPPYG00000006723
I
0.950
MEX3B
Monodelphis domestica
ENSMODG00000019387
I
0.950
MEX3B
Pan troglodytes
ENSPTRG00000007373
I
0.950
MEX3B
Loxodonta africana
ENSLAFG00000006027
I
0.950
MEX3B
Pteropus vampyrus
ENSPVAG00000000093
I
0.950
mex3c
Xenopus tropicalis
ENSXETG00000022367
I
0.950
MEX3B
Callithrix jacchus
ENSCJAG00000008043
I
0.950
Ame_R007174
Ailuropoda melanoleuca
Ame_R007174
I
0.950
MEX3B
Equus caballus
ENSECAG00000013497
I
0.950
MEX3B
Homo sapiens
ENSG00000183496
I
0.950
AAI28670
Xenopus laevis
AAI28670
I
0.950
MEX3B
Bos taurus
ENSBTAG00000016630
I
0.950
ENSCPOG00000008241
Cavia porcellus
ENSCPOG00000008241
I
0.943
MEX3B
Macropus eugenii
ENSMEUG00000002402
I
0.942
MEX3B
Danio rerio
ENSDARG00000058369
I
0.942
MEX3C
Oryzias latipes
ENSORLG00000004985
I
0.942
A1L3F4
Xenopus laevis
A1L3F4
I
0.934
MEX3B
Tetraodon nigroviridis
ENSTNIG00000003398
I
0.934
MEX3C
Takifugu rubripes
ENSTRUG00000011888
I
0.934
AAI30070
Xenopus laevis
AAI30070
I
0.934
BAH79688
Xenopus laevis
BAH79688
I
0.934
MEX3B
Takifugu rubripes
ENSTRUG00000000367
I
0.934
MEX3C
Gasterosteus aculeatus
ENSGACG00000007490
I
0.926
MEX3D
Monodelphis domestica
ENSMODG00000004116
I
0.910
MEX3D
Macropus eugenii
ENSMEUG00000016404
I
0.910
estExt_Genewise1.C_sca_540218
Lottia gigantea
estExt_Genewise1.C_sca_540218
I
0.909
MEX3B
Dasypus novemcinctus
ENSDNOG00000012736
I
0.909
ENSCING00000002603
Ciona intestinalis
ENSCING00000002603
I
0.909
amel4_ncbi_hmm6985
Apis mellifera
amel4_ncbi_hmm6985
I
0.901
MEX3B
Gasterosteus aculeatus
ENSGACG00000012530
I
0.901
nasonia_NCBI_hmm456104
Nasonia vitripennis
nasonia_NCBI_hmm456104
I
0.901
MEX3D
Taeniopygia guttata
ENSTGUG00000000201
I
0.893
XP_001175528.1
Strongylocentrotus purpuratus
XP_001175528.1
I
0.893
XP_786425.2
Strongylocentrotus purpuratus
XP_786425.2
I
0.893
MEX3D
Takifugu rubripes
ENSTRUG00000007986
I
0.885
AAI42552
Xenopus laevis
AAI42552
I
0.885
MEX3D
Tetraodon nigroviridis
ENSTNIG00000015325
I
0.885
e_gw1.15.409.1
Daphnia pulex
e_gw1.15.409.1
I
0.884
MEX3D
Tursiops truncatus
ENSTTRG00000008132
I
0.877
Mex3d
Rattus norvegicus
ENSRNOG00000030830
I
0.877
ENSPPYG00000009324
Pongo pygmaeus
ENSPPYG00000009324
I
0.877
MEX3D
Pan troglodytes
ENSPTRG00000010208
I
0.877
MEX3D
Gorilla gorilla
ENSGGOG00000001083
I
0.877
Mex3d
Mus musculus
ENSMUSG00000048696
I
0.877
MEX3D
Gasterosteus aculeatus
ENSGACG00000015299
I
0.877
MEX3D
Ornithorhynchus anatinus
ENSOANG00000011764
I
0.877
MEX3D
Homo sapiens
ENSG00000181588
I
0.877
MEX3B
Cavia porcellus
ENSCPOG00000023663
I
0.877
AAI33220
Xenopus laevis
AAI33220
I
0.869
AAI30114
Xenopus laevis
AAI30114
I
0.869
gw.320.9.1
Nematostella vectensis
gw.320.9.1
I
0.861
XP_002168292.1
Hydra magnipapillata
XP_002168292.1
I
0.852
Q2YDI4_BOVIN
Bos taurus
ENSBTAG00000014886
I
0.850
MEX3C
Anolis carolinensis
ENSACAG00000010265
I
0.850
MEX3C
Ornithorhynchus anatinus
ENSOANG00000008116
I
0.850
GG16398
Drosophila erecta
FBgn0108630
I
0.844
GA10947-RA
Drosophila pseudoobscura
FBgn0071003
I
0.844
CG11360
Drosophila melanogaster
FBgn0039920
D
0.844
GL18139
Drosophila persimilis
FBgn0155742
I
0.844
GE14558
Drosophila yakuba
FBgn0232157
I
0.844
AAI30196
Xenopus laevis
AAI30196
I
0.844
GK13594
Drosophila willistoni
FBgn0215602
I
0.844
GJ18673
Drosophila virilis
FBgn0205827
I
0.844
GD24410
Drosophila simulans
FBgn0195748
I
0.844
GM26809
Drosophila sechellia
FBgn0181661
I
0.844
GH23938
Drosophila grimshawi
FBgn0131395
I
0.844
Mex3c
Dipodomys ordii
ENSDORG00000007962
I
0.842
MEX3C
Erinaceus europaeus
ENSEEUG00000010864
I
0.842
MEX3C
Myotis lucifugus
ENSMLUG00000012585
I
0.842
MEX3C
Vicugna pacos
ENSVPAG00000003137
I
0.842
MEX3C
Microcebus murinus
ENSMICG00000005815
I
0.842
MEX3C
Macropus eugenii
ENSMEUG00000015929
I
0.842
MEX3C
Sorex araneus
ENSSARG00000006940
I
0.842
MEX3C
Tupaia belangeri
ENSTBEG00000014438
I
0.842
LOC100410413
Callithrix jacchus
ENSCJAG00000007711
I
0.836
GF20555
Drosophila ananassae
FBgn0097561
I
0.836
Mex3a
Dipodomys ordii
ENSDORG00000002921
I
0.836
MEX3A
Monodelphis domestica
ENSMODG00000016954
I
0.836
ENSPPYG00000000729
Pongo pygmaeus
ENSPPYG00000000729
I
0.836
MEX3A
Cavia porcellus
ENSCPOG00000020219
I
0.836
Ame_R015561
Ailuropoda melanoleuca
Ame_R015561
I
0.836
MEX3A
Danio rerio
ENSDARG00000076638
I
0.836
MEX3A
Ochotona princeps
ENSOPRG00000002937
I
0.836
MEX3A
Macaca mulatta
ENSMMUG00000022307
I
0.836
MEX3A
Bos taurus
ENSBTAG00000019158
I
0.836
MEX3A
Oryctolagus cuniculus
ENSOCUG00000005640
I
0.836
MEX3A
Gorilla gorilla
ENSGGOG00000004513
I
0.836
MEX3D
Meleagris gallopavo
ENSMGAG00000002325
I
0.835
MEX3C
Echinops telfairi
ENSETEG00000003647
I
0.833
CBN24563
Caenorhabditis brenneri
CBN24563
I
0.828
CBN20397
Caenorhabditis brenneri
CBN20397
I
0.828
MEX3A
Tursiops truncatus
ENSTTRG00000013346
I
0.828
MEX3B
Anolis carolinensis
ENSACAG00000011072
I
0.825
D3ZFL6_RAT
Rattus norvegicus
ENSRNOG00000025142
I
0.825
Mex3b
Mus musculus
ENSMUSG00000057706
I
0.825
MEX3B
Oryctolagus cuniculus
ENSOCUG00000011603
I
0.825
MEX3B
Canis familiaris
ENSCAFG00000013759
I
0.825
MEX3D
Gallus gallus
ENSGALG00000001106
I
0.825
MEX3B
Procavia capensis
ENSPCAG00000014150
I
0.817
MEX3B
Sorex araneus
ENSSARG00000006007
I
0.817
ENSOCUG00000014295
Oryctolagus cuniculus
ENSOCUG00000014295
I
0.811
mex-3
Caenorhabditis elegans
F53G12.5
I
0.811
CRE03823
Caenorhabditis remanei
CRE03823
I
0.811
CBG05100
Caenorhabditis briggsae
CBG05100
I
0.811
CJA18034
Caenorhabditis japonica
CJA18034
I
0.795
MEX3D
Canis familiaris
ENSCAFG00000023712
I
0.792
MEX3D
Bos taurus
ENSBTAG00000044028
I
0.792
Aqu1.215178
Amphimedon queenslandica
Aqu1.215178
I
0.787
Ame_R011921
Ailuropoda melanoleuca
Ame_R011921
I
0.785
MEX3C
Danio rerio
ENSDARG00000068971
I
0.783
MEX3D
Ochotona princeps
ENSOPRG00000008708
I
0.783
MEX3D
Felis catus
ENSFCAG00000002615
I
0.783
MEX3A
Pteropus vampyrus
ENSPVAG00000010333
I
0.779
MEX3B
Otolemur garnettii
ENSOGAG00000016362
I
0.775
MEX3D
Procavia capensis
ENSPCAG00000010972
I
0.775
PHUM418100
Pediculus humanus
PHUM418100
I
0.769
MEX3A
Microcebus murinus
ENSMICG00000002233
I
0.762
MEX3D
Myotis lucifugus
ENSMLUG00000017018
N
0.760
MKNK2
Callithrix jacchus
ENSCJAG00000000539
I
0.752
CpipJ_CPIJ010634
Culex pipiens
CpipJ_CPIJ010634
I
0.738
CPIJ010634
Culex quinquefasciatus
CPIJ010634
I
0.738
AAEL012708
Aedes aegypti
AAEL012708
I
0.738
AGAP013259
Anopheles gambiae
AGAP013259
I
0.738
BGIBMGA012436
Bombyx mori
BGIBMGA012436
I
0.736
SNAPOd2T00016811001
Oikopleura dioica
SNAPOd2T00016811001
I
0.730
e_gw1.3.1475.1
Trichoplax adhaerens
e_gw1.3.1475.1
I
0.727
MEX3A
Meleagris gallopavo
ENSMGAG00000015563
N
0.727
MEX3A
Taeniopygia guttata
ENSTGUG00000003692
N
0.727
MEX3A
Gallus gallus
ENSGALG00000014016
N
0.727
mex3a
Xenopus tropicalis
ENSXETG00000012704
N
0.719
MEX3A
Anolis carolinensis
ENSACAG00000003739
N
0.719
MEX3A
Pan troglodytes
ENSPTRG00000030373
N
0.717
e_gw1.312.50.1
Capitella teleta
e_gw1.312.50.1
I
0.717
MEX3A
Sorex araneus
ENSSARG00000009868
N
0.717
MEX3A
Myotis lucifugus
ENSMLUG00000010185
N
0.717
MEX3A
Gasterosteus aculeatus
ENSGACG00000013282
N
0.717
MEX3A
Takifugu rubripes
ENSTRUG00000007796
N
0.711
LOC100063974
Equus caballus
ENSECAG00000007279
N
0.711
MEX3A
Loxodonta africana
ENSLAFG00000009220
N
0.711
MEX3A
Tetraodon nigroviridis
ENSTNIG00000004473
N
0.711