CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
MEX3A
(
Microcebus murinus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSMICG00000002233
T19002_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
CG11360
M122_0.6
Drosophila melanogaster
GAGUDW
RNAcompete
Ray et al.(2013)
RNCMPT00129
0.769
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000002042
KH
14
74
TECVPVPTSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFMVTGRREDVATARREI
ENSMICP00000002042
KH
106
158
TIRVRVPYRVVGLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEITGARXXX
Links
Other
KH
family RBPs
Other
Microcebus murinus
RBPs
123 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC100410413
Callithrix jacchus
ENSCJAG00000007711
I
0.909
Mex3a
Dipodomys ordii
ENSDORG00000002921
I
0.909
MEX3A
Cavia porcellus
ENSCPOG00000020219
I
0.909
ENSPPYG00000000729
Pongo pygmaeus
ENSPPYG00000000729
I
0.909
MEX3A
Monodelphis domestica
ENSMODG00000016954
I
0.909
Ame_R015561
Ailuropoda melanoleuca
Ame_R015561
I
0.909
MEX3A
Ochotona princeps
ENSOPRG00000002937
I
0.909
MEX3A
Macaca mulatta
ENSMMUG00000022307
I
0.909
MEX3A
Gorilla gorilla
ENSGGOG00000004513
I
0.909
MEX3A
Bos taurus
ENSBTAG00000019158
I
0.909
MEX3A
Oryctolagus cuniculus
ENSOCUG00000005640
I
0.909
AAI30196
Xenopus laevis
AAI30196
I
0.893
MEX3A
Tursiops truncatus
ENSTTRG00000013346
I
0.893
MEX3A
Pteropus vampyrus
ENSPVAG00000010333
I
0.851
MEX3A
Danio rerio
ENSDARG00000076638
I
0.826
ENSCPOG00000008241
Cavia porcellus
ENSCPOG00000008241
I
0.811
MEX3B
Danio rerio
ENSDARG00000058369
I
0.811
MEX3B
Homo sapiens
ENSG00000183496
I
0.803
MEX3B
Gorilla gorilla
ENSGGOG00000000597
I
0.803
MEX3B
Takifugu rubripes
ENSTRUG00000000367
I
0.803
XP_001175528.1
Strongylocentrotus purpuratus
XP_001175528.1
I
0.803
MEX3B
Loxodonta africana
ENSLAFG00000006027
I
0.803
XP_786425.2
Strongylocentrotus purpuratus
XP_786425.2
I
0.803
MEX3B
Tetraodon nigroviridis
ENSTNIG00000003398
I
0.803
MEX3B
Bos taurus
ENSBTAG00000016630
I
0.803
MEX3B
Equus caballus
ENSECAG00000013497
I
0.803
MEX3B
Callithrix jacchus
ENSCJAG00000008043
I
0.803
Ame_R007174
Ailuropoda melanoleuca
Ame_R007174
I
0.803
MEX3B
Pteropus vampyrus
ENSPVAG00000000093
I
0.803
MEX3B
Pan troglodytes
ENSPTRG00000007373
I
0.803
ENSPPYG00000006723
Pongo pygmaeus
ENSPPYG00000006723
I
0.803
MEX3B
Monodelphis domestica
ENSMODG00000019387
I
0.803
MEX3B
Ochotona princeps
ENSOPRG00000009604
I
0.803
MEX3B
Macaca mulatta
ENSMMUG00000018639
I
0.803
gw.320.9.1
Nematostella vectensis
gw.320.9.1
I
0.802
A1L3F4
Xenopus laevis
A1L3F4
I
0.795
BAH79688
Xenopus laevis
BAH79688
I
0.795
MEX3B
Macropus eugenii
ENSMEUG00000002402
I
0.795
estExt_fgenesh2_pg.C_2010087
Branchiostoma floridae
estExt_fgenesh2_pg.C_2010087
I
0.795
AAI30070
Xenopus laevis
AAI30070
I
0.795
estExt_Genewise1.C_sca_540218
Lottia gigantea
estExt_Genewise1.C_sca_540218
I
0.787
ENSCING00000002603
Ciona intestinalis
ENSCING00000002603
I
0.787
MEX3B
Gasterosteus aculeatus
ENSGACG00000012530
I
0.787
MEX3C
Gasterosteus aculeatus
ENSGACG00000007490
I
0.787
MEX3C
Procavia capensis
ENSPCAG00000009258
I
0.787
nasonia_NCBI_hmm456104
Nasonia vitripennis
nasonia_NCBI_hmm456104
I
0.787
amel4_ncbi_hmm6985
Apis mellifera
amel4_ncbi_hmm6985
I
0.787
MEX3C
Pan troglodytes
ENSPTRG00000010029
I
0.779
MEX3C
Loxodonta africana
ENSLAFG00000027818
I
0.779
MEX3D
Gasterosteus aculeatus
ENSGACG00000015299
I
0.779
Ame_R004658
Ailuropoda melanoleuca
Ame_R004658
I
0.779
Mex3c
Mus musculus
ENSMUSG00000037253
I
0.779
LOC100410023
Callithrix jacchus
ENSCJAG00000001902
I
0.779
MEX3C
Gorilla gorilla
ENSGGOG00000014875
I
0.779
MEX3C
Oryzias latipes
ENSORLG00000004985
I
0.779
MEX3C
Dasypus novemcinctus
ENSDNOG00000006544
I
0.779
MEX3C
Macaca mulatta
ENSMMUG00000023652
I
0.779
Mex3c
Rattus norvegicus
ENSRNOG00000015777
I
0.779
MEX3C
Equus caballus
ENSECAG00000021727
I
0.779
MEX3C
Takifugu rubripes
ENSTRUG00000011888
I
0.779
MEX3C
Pteropus vampyrus
ENSPVAG00000015135
I
0.779
MEX3C
Tursiops truncatus
ENSTTRG00000004570
I
0.779
MEX3C
Homo sapiens
ENSG00000176624
I
0.779
MEX3C
Monodelphis domestica
ENSMODG00000011001
I
0.779
e_gw1.15.409.1
Daphnia pulex
e_gw1.15.409.1
I
0.779
ENSOCUG00000012549
Oryctolagus cuniculus
ENSOCUG00000012549
I
0.779
MEX3C
Choloepus hoffmanni
ENSCHOG00000004915
I
0.779
MEX3C
Cavia porcellus
ENSCPOG00000009646
I
0.779
XP_002168292.1
Hydra magnipapillata
XP_002168292.1
I
0.777
MEX3D
Takifugu rubripes
ENSTRUG00000007986
I
0.770
MEX3D
Tetraodon nigroviridis
ENSTNIG00000015325
I
0.770
AAI28670
Xenopus laevis
AAI28670
I
0.770
mex3c
Xenopus tropicalis
ENSXETG00000022367
I
0.770
GM26809
Drosophila sechellia
FBgn0181661
I
0.769
GL18139
Drosophila persimilis
FBgn0155742
I
0.769
GH23938
Drosophila grimshawi
FBgn0131395
I
0.769
GG16398
Drosophila erecta
FBgn0108630
I
0.769
GD24410
Drosophila simulans
FBgn0195748
I
0.769
GK13594
Drosophila willistoni
FBgn0215602
I
0.769
CG11360
Drosophila melanogaster
FBgn0039920
D
0.769
GA10947-RA
Drosophila pseudoobscura
FBgn0071003
I
0.769
GE14558
Drosophila yakuba
FBgn0232157
I
0.769
GJ18673
Drosophila virilis
FBgn0205827
I
0.769
MEX3B
Dasypus novemcinctus
ENSDNOG00000012736
I
0.762
MEX3C
Canis familiaris
ENSCAFG00000000162
I
0.762
MEX3D
Monodelphis domestica
ENSMODG00000004116
I
0.762
MEX3D
Taeniopygia guttata
ENSTGUG00000000201
I
0.762
MEX3D
Macropus eugenii
ENSMEUG00000016404
I
0.762
GF20555
Drosophila ananassae
FBgn0097561
I
0.760
CBN20397
Caenorhabditis brenneri
CBN20397
I
0.760
CBN24563
Caenorhabditis brenneri
CBN24563
I
0.760
mex-3
Caenorhabditis elegans
F53G12.5
I
0.760
MEX3A
Meleagris gallopavo
ENSMGAG00000015563
N
0.752
MEX3A
Gallus gallus
ENSGALG00000014016
N
0.752
MEX3A
Taeniopygia guttata
ENSTGUG00000003692
N
0.752
LOC100063974
Equus caballus
ENSECAG00000007279
N
0.752
MEX3A
Loxodonta africana
ENSLAFG00000009220
N
0.752
CRE03823
Caenorhabditis remanei
CRE03823
I
0.752
MEX3D
Pan troglodytes
ENSPTRG00000010208
I
0.746
MEX3D
Tursiops truncatus
ENSTTRG00000008132
I
0.746
MEX3D
Gorilla gorilla
ENSGGOG00000001083
I
0.746
ENSPPYG00000009324
Pongo pygmaeus
ENSPPYG00000009324
I
0.746
MEX3D
Homo sapiens
ENSG00000181588
I
0.746
Mex3d
Rattus norvegicus
ENSRNOG00000030830
I
0.746
MEX3B
Cavia porcellus
ENSCPOG00000023663
I
0.746
Mex3d
Mus musculus
ENSMUSG00000048696
I
0.746
MEX3A
Sorex araneus
ENSSARG00000009868
N
0.744
mex3a
Xenopus tropicalis
ENSXETG00000012704
N
0.744
CJA18034
Caenorhabditis japonica
CJA18034
I
0.744
MEX3A
Pan troglodytes
ENSPTRG00000030373
N
0.744
CBG05100
Caenorhabditis briggsae
CBG05100
I
0.744
MEX3A
Myotis lucifugus
ENSMLUG00000010185
N
0.744
MEX3A
Anolis carolinensis
ENSACAG00000003739
N
0.744
AAI42552
Xenopus laevis
AAI42552
I
0.738
AAI30114
Xenopus laevis
AAI30114
I
0.730
AAI33220
Xenopus laevis
AAI33220
I
0.730
MEX3D
Ornithorhynchus anatinus
ENSOANG00000011764
I
0.730
ENSOCUG00000014295
Oryctolagus cuniculus
ENSOCUG00000014295
I
0.725
Aqu1.215178
Amphimedon queenslandica
Aqu1.215178
I
0.719
CpipJ_CPIJ010634
Culex pipiens
CpipJ_CPIJ010634
I
0.702
CPIJ010634
Culex quinquefasciatus
CPIJ010634
I
0.702
AGAP013259
Anopheles gambiae
AGAP013259
I
0.702
AAEL012708
Aedes aegypti
AAEL012708
I
0.702