gw.320.9.1 (Nematostella vectensis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 gw.320.9.1 T21269_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG11360
M122_0.6 		Drosophila melanogaster GAGUDW RNAcompete
Ray et al.(2013)
RNCMPT00129 		0.868
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
gw.320.9.1 KH 7 67
gw.320.9.1 KH 103 162

Links

Other KH family RBPs
Other Nematostella vectensis RBPs

160 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1.C_sca_540218 Lottia gigantea estExt_Genewise1.C_sca_540218 I 0.918
estExt_fgenesh2_pg.C_2010087 Branchiostoma floridae estExt_fgenesh2_pg.C_2010087 I 0.902
ENSCPOG00000008241 Cavia porcellus ENSCPOG00000008241 I 0.902
MEX3B Equus caballus ENSECAG00000013497 I 0.893
MEX3C Procavia capensis ENSPCAG00000009258 I 0.893
MEX3B Macaca mulatta ENSMMUG00000018639 I 0.893
MEX3C Oryzias latipes ENSORLG00000004985 I 0.893
ENSPPYG00000006723 Pongo pygmaeus ENSPPYG00000006723 I 0.893
MEX3B Pan troglodytes ENSPTRG00000007373 I 0.893
MEX3B Bos taurus ENSBTAG00000016630 I 0.893
MEX3B Callithrix jacchus ENSCJAG00000008043 I 0.893
BAH79688 Xenopus laevis BAH79688 I 0.893
MEX3B Pteropus vampyrus ENSPVAG00000000093 I 0.893
MEX3B Monodelphis domestica ENSMODG00000019387 I 0.893
amel4_ncbi_hmm6985 Apis mellifera amel4_ncbi_hmm6985 I 0.893
AAI30070 Xenopus laevis AAI30070 I 0.893
MEX3C Takifugu rubripes ENSTRUG00000011888 I 0.893
Ame_R007174 Ailuropoda melanoleuca Ame_R007174 I 0.893
MEX3B Loxodonta africana ENSLAFG00000006027 I 0.893
MEX3B Homo sapiens ENSG00000183496 I 0.893
MEX3B Gorilla gorilla ENSGGOG00000000597 I 0.893
MEX3B Ochotona princeps ENSOPRG00000009604 I 0.893
A1L3F4 Xenopus laevis A1L3F4 I 0.893
MEX3C Gorilla gorilla ENSGGOG00000014875 I 0.885
MEX3C Loxodonta africana ENSLAFG00000027818 I 0.885
MEX3B Macropus eugenii ENSMEUG00000002402 I 0.885
LOC100410023 Callithrix jacchus ENSCJAG00000001902 I 0.885
ENSOCUG00000012549 Oryctolagus cuniculus ENSOCUG00000012549 I 0.885
MEX3B Danio rerio ENSDARG00000058369 I 0.885
MEX3C Equus caballus ENSECAG00000021727 I 0.885
MEX3C Homo sapiens ENSG00000176624 I 0.885
MEX3C Gasterosteus aculeatus ENSGACG00000007490 I 0.885
Mex3c Mus musculus ENSMUSG00000037253 I 0.885
MEX3C Pan troglodytes ENSPTRG00000010029 I 0.885
MEX3C Dasypus novemcinctus ENSDNOG00000006544 I 0.885
MEX3C Cavia porcellus ENSCPOG00000009646 I 0.885
MEX3C Choloepus hoffmanni ENSCHOG00000004915 I 0.885
MEX3C Monodelphis domestica ENSMODG00000011001 I 0.885
XP_001175528.1 Strongylocentrotus purpuratus XP_001175528.1 I 0.885
MEX3C Tursiops truncatus ENSTTRG00000004570 I 0.885
nasonia_NCBI_hmm456104 Nasonia vitripennis nasonia_NCBI_hmm456104 I 0.885
XP_786425.2 Strongylocentrotus purpuratus XP_786425.2 I 0.885
MEX3C Macaca mulatta ENSMMUG00000023652 I 0.885
Mex3c Rattus norvegicus ENSRNOG00000015777 I 0.885
Ame_R004658 Ailuropoda melanoleuca Ame_R004658 I 0.885
MEX3C Pteropus vampyrus ENSPVAG00000015135 I 0.885
GH23938 Drosophila grimshawi FBgn0131395 I 0.884
GK13594 Drosophila willistoni FBgn0215602 I 0.884
GJ18673 Drosophila virilis FBgn0205827 I 0.884
AAI28670 Xenopus laevis AAI28670 I 0.877
MEX3B Takifugu rubripes ENSTRUG00000000367 I 0.877
mex3c Xenopus tropicalis ENSXETG00000022367 I 0.877
ENSCING00000002603 Ciona intestinalis ENSCING00000002603 I 0.877
MEX3B Tetraodon nigroviridis ENSTNIG00000003398 I 0.877
e_gw1.15.409.1 Daphnia pulex e_gw1.15.409.1 I 0.877
XP_002168292.1 Hydra magnipapillata XP_002168292.1 I 0.876
MEX3D Taeniopygia guttata ENSTGUG00000000201 I 0.869
MEX3D Monodelphis domestica ENSMODG00000004116 I 0.869
MEX3D Macropus eugenii ENSMEUG00000016404 I 0.869
MEX3B Gasterosteus aculeatus ENSGACG00000012530 I 0.869
GE14558 Drosophila yakuba FBgn0232157 I 0.868
GL18139 Drosophila persimilis FBgn0155742 I 0.868
GM26809 Drosophila sechellia FBgn0181661 I 0.868
CG11360 Drosophila melanogaster FBgn0039920 D 0.868
MEX3A Danio rerio ENSDARG00000076638 I 0.868
GG16398 Drosophila erecta FBgn0108630 I 0.868
GD24410 Drosophila simulans FBgn0195748 I 0.868
AAI30196 Xenopus laevis AAI30196 I 0.868
GF20555 Drosophila ananassae FBgn0097561 I 0.868
GA10947-RA Drosophila pseudoobscura FBgn0071003 I 0.868
MEX3D Takifugu rubripes ENSTRUG00000007986 I 0.861
MEX3D Tetraodon nigroviridis ENSTNIG00000015325 I 0.861
MEX3C Canis familiaris ENSCAFG00000000162 I 0.861
MEX3A Oryctolagus cuniculus ENSOCUG00000005640 I 0.860
MEX3A Macaca mulatta ENSMMUG00000022307 I 0.860
MEX3A Cavia porcellus ENSCPOG00000020219 I 0.860
MEX3A Gorilla gorilla ENSGGOG00000004513 I 0.860
LOC100410413 Callithrix jacchus ENSCJAG00000007711 I 0.860
MEX3A Bos taurus ENSBTAG00000019158 I 0.860
Ame_R015561 Ailuropoda melanoleuca Ame_R015561 I 0.860
Mex3a Dipodomys ordii ENSDORG00000002921 I 0.860
MEX3A Monodelphis domestica ENSMODG00000016954 I 0.860
MEX3A Ochotona princeps ENSOPRG00000002937 I 0.860
ENSPPYG00000000729 Pongo pygmaeus ENSPPYG00000000729 I 0.860
ENSPPYG00000009324 Pongo pygmaeus ENSPPYG00000009324 I 0.852
MEX3D Tursiops truncatus ENSTTRG00000008132 I 0.852
Mex3d Rattus norvegicus ENSRNOG00000030830 I 0.852
Mex3d Mus musculus ENSMUSG00000048696 I 0.852
MEX3D Pan troglodytes ENSPTRG00000010208 I 0.852
MEX3D Gorilla gorilla ENSGGOG00000001083 I 0.852
MEX3D Homo sapiens ENSG00000181588 I 0.852
MEX3B Cavia porcellus ENSCPOG00000023663 I 0.852
MEX3B Dasypus novemcinctus ENSDNOG00000012736 I 0.852
MEX3D Gasterosteus aculeatus ENSGACG00000015299 I 0.852
AAI42552 Xenopus laevis AAI42552 I 0.844
MEX3A Tursiops truncatus ENSTTRG00000013346 I 0.843
CRE03823 Caenorhabditis remanei CRE03823 I 0.843
MEX3D Ornithorhynchus anatinus ENSOANG00000011764 I 0.836
AAI30114 Xenopus laevis AAI30114 I 0.836
AAI33220 Xenopus laevis AAI33220 I 0.836
mex-3 Caenorhabditis elegans F53G12.5 I 0.835
CJA18034 Caenorhabditis japonica CJA18034 I 0.818
CBN24563 Caenorhabditis brenneri CBN24563 I 0.818
CBN20397 Caenorhabditis brenneri CBN20397 I 0.818
Aqu1.215178 Amphimedon queenslandica Aqu1.215178 I 0.818
CBG05100 Caenorhabditis briggsae CBG05100 I 0.810
MEX3A Microcebus murinus ENSMICG00000002233 I 0.802
MEX3A Pteropus vampyrus ENSPVAG00000010333 I 0.802
ENSOCUG00000014295 Oryctolagus cuniculus ENSOCUG00000014295 I 0.777
CPIJ010634 Culex quinquefasciatus CPIJ010634 I 0.769
AGAP013259 Anopheles gambiae AGAP013259 I 0.769
CpipJ_CPIJ010634 Culex pipiens CpipJ_CPIJ010634 I 0.769
AAEL012708 Aedes aegypti AAEL012708 I 0.769
e_gw1.3.1475.1 Trichoplax adhaerens e_gw1.3.1475.1 I 0.752
MEX3D Meleagris gallopavo ENSMGAG00000002325 I 0.746
MEX3B Sorex araneus ENSSARG00000006007 I 0.744
MEX3C Echinops telfairi ENSETEG00000003647 I 0.744
MEX3B Procavia capensis ENSPCAG00000014150 I 0.744
D3ZFL6_RAT Rattus norvegicus ENSRNOG00000025142 I 0.738
MEX3B Canis familiaris ENSCAFG00000013759 I 0.738
Mex3b Mus musculus ENSMUSG00000057706 I 0.738
MEX3B Oryctolagus cuniculus ENSOCUG00000011603 I 0.738
MEX3C Erinaceus europaeus ENSEEUG00000010864 I 0.736
MEX3C Macropus eugenii ENSMEUG00000015929 I 0.736
MEX3C Microcebus murinus ENSMICG00000005815 I 0.736
MEX3C Vicugna pacos ENSVPAG00000003137 I 0.736
Mex3c Dipodomys ordii ENSDORG00000007962 I 0.736
MEX3C Sorex araneus ENSSARG00000006940 I 0.736
MEX3C Tupaia belangeri ENSTBEG00000014438 I 0.736
MEX3C Myotis lucifugus ENSMLUG00000012585 I 0.736
MEX3C Ornithorhynchus anatinus ENSOANG00000008116 I 0.730
MEX3B Anolis carolinensis ENSACAG00000011072 I 0.730
PHUM418100 Pediculus humanus PHUM418100 I 0.730
MEX3C Anolis carolinensis ENSACAG00000010265 I 0.730
Q2YDI4_BOVIN Bos taurus ENSBTAG00000014886 I 0.730
MEX3D Gallus gallus ENSGALG00000001106 I 0.730
MEX3D Procavia capensis ENSPCAG00000010972 I 0.727
e_gw1.312.50.1 Capitella teleta e_gw1.312.50.1 I 0.727
SNAPOd2T00016811001 Oikopleura dioica SNAPOd2T00016811001 I 0.727
MEX3A Meleagris gallopavo ENSMGAG00000015563 N 0.719
MEX3A Gallus gallus ENSGALG00000014016 N 0.719
MEX3D Felis catus ENSFCAG00000002615 I 0.719
MEX3C Danio rerio ENSDARG00000068971 I 0.719
MEX3D Ochotona princeps ENSOPRG00000008708 I 0.719
BGIBMGA012436 Bombyx mori BGIBMGA012436 I 0.719
MEX3A Taeniopygia guttata ENSTGUG00000003692 N 0.719
MEX3D Bos taurus ENSBTAG00000044028 I 0.713
Ame_R011921 Ailuropoda melanoleuca Ame_R011921 I 0.713
MEX3D Canis familiaris ENSCAFG00000023712 I 0.713
LOC100063974 Equus caballus ENSECAG00000007279 N 0.711
MEX3A Takifugu rubripes ENSTRUG00000007796 N 0.711
MEX3A Tetraodon nigroviridis ENSTNIG00000004473 N 0.711
MEX3A Loxodonta africana ENSLAFG00000009220 N 0.711
MEX3B Otolemur garnettii ENSOGAG00000016362 I 0.711
MEX3A Anolis carolinensis ENSACAG00000003739 N 0.711
mex3a Xenopus tropicalis ENSXETG00000012704 N 0.711
MEX3A Gasterosteus aculeatus ENSGACG00000013282 N 0.702
MEX3A Sorex araneus ENSSARG00000009868 N 0.702
MEX3A Myotis lucifugus ENSMLUG00000010185 N 0.702
MEX3A Pan troglodytes ENSPTRG00000030373 N 0.702