CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MEX3A
(
Pteropus vampyrus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSPVAG00000010333
T19408_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
CG11360
M122_0.6
Drosophila melanogaster
GAGUDW
RNAcompete
Ray et al.(2013)
RNCMPT00129
0.760
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000009740
KH
11
67
VSFTSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFMVTGRREDVATARREI
ENSPVAP00000009740
KH
99
158
TIRVRVPYRVVGLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEI
Links
Other
KH
family RBPs
Other
Pteropus vampyrus
RBPs
156 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC100410413
Callithrix jacchus
ENSCJAG00000007711
I
0.942
MEX3A
Gorilla gorilla
ENSGGOG00000004513
I
0.942
MEX3A
Macaca mulatta
ENSMMUG00000022307
I
0.942
MEX3A
Monodelphis domestica
ENSMODG00000016954
I
0.942
MEX3A
Ochotona princeps
ENSOPRG00000002937
I
0.942
MEX3A
Oryctolagus cuniculus
ENSOCUG00000005640
I
0.942
ENSPPYG00000000729
Pongo pygmaeus
ENSPPYG00000000729
I
0.942
MEX3A
Bos taurus
ENSBTAG00000019158
I
0.942
MEX3A
Cavia porcellus
ENSCPOG00000020219
I
0.942
Ame_R015561
Ailuropoda melanoleuca
Ame_R015561
I
0.942
Mex3a
Dipodomys ordii
ENSDORG00000002921
I
0.942
MEX3A
Tursiops truncatus
ENSTTRG00000013346
I
0.926
AAI30196
Xenopus laevis
AAI30196
I
0.926
LOC100063974
Equus caballus
ENSECAG00000007279
N
0.872
MEX3A
Gallus gallus
ENSGALG00000014016
N
0.872
MEX3A
Loxodonta africana
ENSLAFG00000009220
N
0.872
MEX3A
Meleagris gallopavo
ENSMGAG00000015563
N
0.872
MEX3A
Taeniopygia guttata
ENSTGUG00000003692
N
0.872
MEX3A
Myotis lucifugus
ENSMLUG00000010185
N
0.863
mex3a
Xenopus tropicalis
ENSXETG00000012704
N
0.863
MEX3A
Anolis carolinensis
ENSACAG00000003739
N
0.863
MEX3A
Sorex araneus
ENSSARG00000009868
N
0.863
MEX3A
Pan troglodytes
ENSPTRG00000030373
N
0.863
MEX3A
Microcebus murinus
ENSMICG00000002233
I
0.851
MEX3A
Danio rerio
ENSDARG00000076638
I
0.851
MEX3B
Danio rerio
ENSDARG00000058369
I
0.828
ENSCPOG00000008241
Cavia porcellus
ENSCPOG00000008241
I
0.828
MEX3B
Callithrix jacchus
ENSCJAG00000008043
I
0.820
AAI30070
Xenopus laevis
AAI30070
I
0.820
MEX3B
Gorilla gorilla
ENSGGOG00000000597
I
0.820
Ame_R007174
Ailuropoda melanoleuca
Ame_R007174
I
0.820
ENSPPYG00000006723
Pongo pygmaeus
ENSPPYG00000006723
I
0.820
MEX3B
Equus caballus
ENSECAG00000013497
I
0.820
A1L3F4
Xenopus laevis
A1L3F4
I
0.820
MEX3B
Homo sapiens
ENSG00000183496
I
0.820
MEX3B
Loxodonta africana
ENSLAFG00000006027
I
0.820
MEX3B
Macaca mulatta
ENSMMUG00000018639
I
0.820
MEX3B
Ochotona princeps
ENSOPRG00000009604
I
0.820
MEX3B
Monodelphis domestica
ENSMODG00000019387
I
0.820
MEX3B
Takifugu rubripes
ENSTRUG00000000367
I
0.820
MEX3B
Bos taurus
ENSBTAG00000016630
I
0.820
MEX3B
Pteropus vampyrus
ENSPVAG00000000093
I
0.820
BAH79688
Xenopus laevis
BAH79688
I
0.820
MEX3B
Pan troglodytes
ENSPTRG00000007373
I
0.820
MEX3B
Tetraodon nigroviridis
ENSTNIG00000003398
I
0.820
MEX3B
Dasypus novemcinctus
ENSDNOG00000012736
I
0.817
estExt_fgenesh2_pg.C_2010087
Branchiostoma floridae
estExt_fgenesh2_pg.C_2010087
I
0.811
MEX3B
Macropus eugenii
ENSMEUG00000002402
I
0.811
AAI28670
Xenopus laevis
AAI28670
I
0.810
mex3c
Xenopus tropicalis
ENSXETG00000022367
I
0.810
MEX3C
Procavia capensis
ENSPCAG00000009258
I
0.803
MEX3C
Oryzias latipes
ENSORLG00000004985
I
0.803
MEX3C
Gasterosteus aculeatus
ENSGACG00000007490
I
0.803
MEX3B
Gasterosteus aculeatus
ENSGACG00000012530
I
0.803
gw.320.9.1
Nematostella vectensis
gw.320.9.1
I
0.802
MEX3C
Choloepus hoffmanni
ENSCHOG00000004915
I
0.795
LOC100410023
Callithrix jacchus
ENSCJAG00000001902
I
0.795
MEX3C
Cavia porcellus
ENSCPOG00000009646
I
0.795
MEX3C
Pteropus vampyrus
ENSPVAG00000015135
I
0.795
MEX3C
Gorilla gorilla
ENSGGOG00000014875
I
0.795
MEX3C
Monodelphis domestica
ENSMODG00000011001
I
0.795
Mex3c
Mus musculus
ENSMUSG00000037253
I
0.795
ENSOCUG00000012549
Oryctolagus cuniculus
ENSOCUG00000012549
I
0.795
MEX3C
Pan troglodytes
ENSPTRG00000010029
I
0.795
MEX3C
Macaca mulatta
ENSMMUG00000023652
I
0.795
MEX3C
Loxodonta africana
ENSLAFG00000027818
I
0.795
MEX3C
Equus caballus
ENSECAG00000021727
I
0.795
MEX3C
Homo sapiens
ENSG00000176624
I
0.795
MEX3D
Gasterosteus aculeatus
ENSGACG00000015299
I
0.795
MEX3C
Dasypus novemcinctus
ENSDNOG00000006544
I
0.795
ENSCING00000002603
Ciona intestinalis
ENSCING00000002603
I
0.795
Ame_R004658
Ailuropoda melanoleuca
Ame_R004658
I
0.795
XP_786425.2
Strongylocentrotus purpuratus
XP_786425.2
I
0.795
estExt_Genewise1.C_sca_540218
Lottia gigantea
estExt_Genewise1.C_sca_540218
I
0.795
MEX3C
Takifugu rubripes
ENSTRUG00000011888
I
0.795
MEX3C
Tursiops truncatus
ENSTTRG00000004570
I
0.795
XP_001175528.1
Strongylocentrotus purpuratus
XP_001175528.1
I
0.795
Mex3c
Rattus norvegicus
ENSRNOG00000015777
I
0.795
amel4_ncbi_hmm6985
Apis mellifera
amel4_ncbi_hmm6985
I
0.787
MEX3D
Tetraodon nigroviridis
ENSTNIG00000015325
I
0.787
MEX3D
Takifugu rubripes
ENSTRUG00000007986
I
0.787
mex-3
Caenorhabditis elegans
F53G12.5
I
0.785
MEX3D
Macropus eugenii
ENSMEUG00000016404
I
0.779
MEX3D
Taeniopygia guttata
ENSTGUG00000000201
I
0.779
e_gw1.15.409.1
Daphnia pulex
e_gw1.15.409.1
I
0.779
nasonia_NCBI_hmm456104
Nasonia vitripennis
nasonia_NCBI_hmm456104
I
0.779
MEX3D
Monodelphis domestica
ENSMODG00000004116
I
0.779
MEX3C
Canis familiaris
ENSCAFG00000000162
I
0.779
MEX3A
Tetraodon nigroviridis
ENSTNIG00000004473
N
0.778
MEX3A
Takifugu rubripes
ENSTRUG00000007796
N
0.778
CJA18034
Caenorhabditis japonica
CJA18034
I
0.777
CBN20397
Caenorhabditis brenneri
CBN20397
I
0.777
CBN24563
Caenorhabditis brenneri
CBN24563
I
0.777
CRE03823
Caenorhabditis remanei
CRE03823
I
0.777
MEX3A
Gasterosteus aculeatus
ENSGACG00000013282
N
0.769
GH23938
Drosophila grimshawi
FBgn0131395
I
0.769
GJ18673
Drosophila virilis
FBgn0205827
I
0.769
GK13594
Drosophila willistoni
FBgn0215602
I
0.769
XP_002168292.1
Hydra magnipapillata
XP_002168292.1
I
0.769
ENSPPYG00000009324
Pongo pygmaeus
ENSPPYG00000009324
I
0.762
MEX3D
Homo sapiens
ENSG00000181588
I
0.762
MEX3D
Pan troglodytes
ENSPTRG00000010208
I
0.762
Mex3d
Rattus norvegicus
ENSRNOG00000030830
I
0.762
MEX3B
Cavia porcellus
ENSCPOG00000023663
I
0.762
MEX3D
Tursiops truncatus
ENSTTRG00000008132
I
0.762
Mex3d
Mus musculus
ENSMUSG00000048696
I
0.762
AAI42552
Xenopus laevis
AAI42552
I
0.762
MEX3D
Gorilla gorilla
ENSGGOG00000001083
I
0.762
MEX3B
Procavia capensis
ENSPCAG00000014150
I
0.761
MEX3B
Sorex araneus
ENSSARG00000006007
I
0.761
GL18139
Drosophila persimilis
FBgn0155742
I
0.760
CG11360
Drosophila melanogaster
FBgn0039920
D
0.760
GA10947-RA
Drosophila pseudoobscura
FBgn0071003
I
0.760
GF20555
Drosophila ananassae
FBgn0097561
I
0.760
GG16398
Drosophila erecta
FBgn0108630
I
0.760
GD24410
Drosophila simulans
FBgn0195748
I
0.760
CBG05100
Caenorhabditis briggsae
CBG05100
I
0.760
GM26809
Drosophila sechellia
FBgn0181661
I
0.760
GE14558
Drosophila yakuba
FBgn0232157
I
0.760
MEX3B
Canis familiaris
ENSCAFG00000013759
I
0.754
Mex3b
Mus musculus
ENSMUSG00000057706
I
0.754
D3ZFL6_RAT
Rattus norvegicus
ENSRNOG00000025142
I
0.754
MEX3B
Oryctolagus cuniculus
ENSOCUG00000011603
I
0.754
AAI33220
Xenopus laevis
AAI33220
I
0.754
AAI30114
Xenopus laevis
AAI30114
I
0.754
e_gw1.3.1475.1
Trichoplax adhaerens
e_gw1.3.1475.1
I
0.752
ENSOCUG00000014295
Oryctolagus cuniculus
ENSOCUG00000014295
I
0.752
MEX3D
Ornithorhynchus anatinus
ENSOANG00000011764
I
0.746
MEX3D
Meleagris gallopavo
ENSMGAG00000002325
I
0.746
MEX3B
Anolis carolinensis
ENSACAG00000011072
I
0.746
MEX3C
Echinops telfairi
ENSETEG00000003647
I
0.744
Aqu1.215178
Amphimedon queenslandica
Aqu1.215178
I
0.736
MEX3C
Microcebus murinus
ENSMICG00000005815
I
0.735
MEX3C
Tupaia belangeri
ENSTBEG00000014438
I
0.735
MEX3C
Sorex araneus
ENSSARG00000006940
I
0.735
MEX3C
Myotis lucifugus
ENSMLUG00000012585
I
0.735
Mex3c
Dipodomys ordii
ENSDORG00000007962
I
0.735
MEX3C
Macropus eugenii
ENSMEUG00000015929
I
0.735
MEX3C
Vicugna pacos
ENSVPAG00000003137
I
0.735
MEX3C
Erinaceus europaeus
ENSEEUG00000010864
I
0.735
MEX3C
Ornithorhynchus anatinus
ENSOANG00000008116
I
0.729
MEX3C
Anolis carolinensis
ENSACAG00000010265
I
0.729
MEX3D
Gallus gallus
ENSGALG00000001106
I
0.729
Q2YDI4_BOVIN
Bos taurus
ENSBTAG00000014886
I
0.729
BGIBMGA012436
Bombyx mori
BGIBMGA012436
I
0.718
MEX3D
Felis catus
ENSFCAG00000002615
I
0.718
MEX3D
Procavia capensis
ENSPCAG00000010972
I
0.718
MEX3D
Ochotona princeps
ENSOPRG00000008708
I
0.718
MEX3B
Otolemur garnettii
ENSOGAG00000016362
I
0.718
Ame_R011921
Ailuropoda melanoleuca
Ame_R011921
I
0.712
MEX3D
Bos taurus
ENSBTAG00000044028
I
0.712
PHUM418100
Pediculus humanus
PHUM418100
I
0.712
MEX3D
Canis familiaris
ENSCAFG00000023712
I
0.712
MEX3C
Danio rerio
ENSDARG00000068971
I
0.709
MEX3D
Myotis lucifugus
ENSMLUG00000017018
N
0.703
SNAPOd2T00016811001
Oikopleura dioica
SNAPOd2T00016811001
I
0.702