CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MEX3C
(
Equus caballus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSECAG00000021727
T18715_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
CG11360
M122_0.6
Drosophila melanogaster
GAGUDW
RNAcompete
Ray et al.(2013)
RNCMPT00129
0.869
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSECAP00000019140
KH
46
106
TECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPIFVVTGRKEDVAMAKREI
ENSECAP00000019140
KH
141
200
TVQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEI
Links
Other
KH
family RBPs
Other
Equus caballus
RBPs
162 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MEX3C
Tursiops truncatus
ENSTTRG00000004570
I
1.000
MEX3C
Cavia porcellus
ENSCPOG00000009646
I
1.000
MEX3C
Choloepus hoffmanni
ENSCHOG00000004915
I
1.000
Mex3c
Mus musculus
ENSMUSG00000037253
I
1.000
ENSOCUG00000012549
Oryctolagus cuniculus
ENSOCUG00000012549
I
1.000
MEX3C
Gorilla gorilla
ENSGGOG00000014875
I
1.000
LOC100410023
Callithrix jacchus
ENSCJAG00000001902
I
1.000
MEX3C
Loxodonta africana
ENSLAFG00000027818
I
1.000
MEX3C
Monodelphis domestica
ENSMODG00000011001
I
1.000
MEX3C
Pteropus vampyrus
ENSPVAG00000015135
I
1.000
Mex3c
Rattus norvegicus
ENSRNOG00000015777
I
1.000
MEX3C
Homo sapiens
ENSG00000176624
I
1.000
MEX3C
Dasypus novemcinctus
ENSDNOG00000006544
I
1.000
MEX3C
Macaca mulatta
ENSMMUG00000023652
I
1.000
MEX3C
Pan troglodytes
ENSPTRG00000010029
I
1.000
Ame_R004658
Ailuropoda melanoleuca
Ame_R004658
I
1.000
MEX3C
Procavia capensis
ENSPCAG00000009258
I
0.992
estExt_fgenesh2_pg.C_2010087
Branchiostoma floridae
estExt_fgenesh2_pg.C_2010087
I
0.983
MEX3B
Monodelphis domestica
ENSMODG00000019387
I
0.975
mex3c
Xenopus tropicalis
ENSXETG00000022367
I
0.975
MEX3B
Pan troglodytes
ENSPTRG00000007373
I
0.975
MEX3B
Pteropus vampyrus
ENSPVAG00000000093
I
0.975
ENSPPYG00000006723
Pongo pygmaeus
ENSPPYG00000006723
I
0.975
MEX3B
Ochotona princeps
ENSOPRG00000009604
I
0.975
MEX3B
Macaca mulatta
ENSMMUG00000018639
I
0.975
Ame_R007174
Ailuropoda melanoleuca
Ame_R007174
I
0.975
AAI28670
Xenopus laevis
AAI28670
I
0.975
MEX3B
Callithrix jacchus
ENSCJAG00000008043
I
0.975
MEX3C
Canis familiaris
ENSCAFG00000000162
I
0.975
MEX3B
Gorilla gorilla
ENSGGOG00000000597
I
0.975
MEX3B
Equus caballus
ENSECAG00000013497
I
0.975
MEX3B
Homo sapiens
ENSG00000183496
I
0.975
MEX3B
Bos taurus
ENSBTAG00000016630
I
0.975
MEX3B
Loxodonta africana
ENSLAFG00000006027
I
0.975
ENSCPOG00000008241
Cavia porcellus
ENSCPOG00000008241
I
0.967
MEX3C
Oryzias latipes
ENSORLG00000004985
I
0.967
MEX3B
Macropus eugenii
ENSMEUG00000002402
I
0.967
MEX3B
Danio rerio
ENSDARG00000058369
I
0.967
BAH79688
Xenopus laevis
BAH79688
I
0.959
MEX3B
Takifugu rubripes
ENSTRUG00000000367
I
0.959
AAI30070
Xenopus laevis
AAI30070
I
0.959
MEX3B
Tetraodon nigroviridis
ENSTNIG00000003398
I
0.959
MEX3C
Takifugu rubripes
ENSTRUG00000011888
I
0.959
A1L3F4
Xenopus laevis
A1L3F4
I
0.959
MEX3C
Gasterosteus aculeatus
ENSGACG00000007490
I
0.950
MEX3D
Monodelphis domestica
ENSMODG00000004116
I
0.934
MEX3D
Macropus eugenii
ENSMEUG00000016404
I
0.934
ENSCING00000002603
Ciona intestinalis
ENSCING00000002603
I
0.934
estExt_Genewise1.C_sca_540218
Lottia gigantea
estExt_Genewise1.C_sca_540218
I
0.934
MEX3B
Dasypus novemcinctus
ENSDNOG00000012736
I
0.934
MEX3B
Gasterosteus aculeatus
ENSGACG00000012530
I
0.926
nasonia_NCBI_hmm456104
Nasonia vitripennis
nasonia_NCBI_hmm456104
I
0.926
amel4_ncbi_hmm6985
Apis mellifera
amel4_ncbi_hmm6985
I
0.926
MEX3D
Taeniopygia guttata
ENSTGUG00000000201
I
0.918
XP_786425.2
Strongylocentrotus purpuratus
XP_786425.2
I
0.917
XP_001175528.1
Strongylocentrotus purpuratus
XP_001175528.1
I
0.917
MEX3D
Takifugu rubripes
ENSTRUG00000007986
I
0.910
AAI42552
Xenopus laevis
AAI42552
I
0.910
MEX3D
Tetraodon nigroviridis
ENSTNIG00000015325
I
0.910
e_gw1.15.409.1
Daphnia pulex
e_gw1.15.409.1
I
0.909
MEX3B
Cavia porcellus
ENSCPOG00000023663
I
0.902
Mex3d
Rattus norvegicus
ENSRNOG00000030830
I
0.902
MEX3D
Tursiops truncatus
ENSTTRG00000008132
I
0.902
MEX3D
Ornithorhynchus anatinus
ENSOANG00000011764
I
0.902
Mex3d
Mus musculus
ENSMUSG00000048696
I
0.902
ENSPPYG00000009324
Pongo pygmaeus
ENSPPYG00000009324
I
0.902
MEX3D
Gorilla gorilla
ENSGGOG00000001083
I
0.902
MEX3D
Homo sapiens
ENSG00000181588
I
0.902
MEX3D
Gasterosteus aculeatus
ENSGACG00000015299
I
0.902
MEX3D
Pan troglodytes
ENSPTRG00000010208
I
0.902
AAI33220
Xenopus laevis
AAI33220
I
0.893
AAI30114
Xenopus laevis
AAI30114
I
0.893
gw.320.9.1
Nematostella vectensis
gw.320.9.1
I
0.885
XP_002168292.1
Hydra magnipapillata
XP_002168292.1
I
0.877
GM26809
Drosophila sechellia
FBgn0181661
I
0.869
GH23938
Drosophila grimshawi
FBgn0131395
I
0.869
GG16398
Drosophila erecta
FBgn0108630
I
0.869
GA10947-RA
Drosophila pseudoobscura
FBgn0071003
I
0.869
GD24410
Drosophila simulans
FBgn0195748
I
0.869
GJ18673
Drosophila virilis
FBgn0205827
I
0.869
AAI30196
Xenopus laevis
AAI30196
I
0.869
GE14558
Drosophila yakuba
FBgn0232157
I
0.869
GK13594
Drosophila willistoni
FBgn0215602
I
0.869
CG11360
Drosophila melanogaster
FBgn0039920
D
0.869
GL18139
Drosophila persimilis
FBgn0155742
I
0.869
GF20555
Drosophila ananassae
FBgn0097561
I
0.861
MEX3A
Danio rerio
ENSDARG00000076638
I
0.861
ENSPPYG00000000729
Pongo pygmaeus
ENSPPYG00000000729
I
0.852
LOC100410413
Callithrix jacchus
ENSCJAG00000007711
I
0.852
MEX3A
Oryctolagus cuniculus
ENSOCUG00000005640
I
0.852
Mex3a
Dipodomys ordii
ENSDORG00000002921
I
0.852
MEX3A
Monodelphis domestica
ENSMODG00000016954
I
0.852
MEX3A
Macaca mulatta
ENSMMUG00000022307
I
0.852
MEX3A
Gorilla gorilla
ENSGGOG00000004513
I
0.852
MEX3A
Cavia porcellus
ENSCPOG00000020219
I
0.852
Ame_R015561
Ailuropoda melanoleuca
Ame_R015561
I
0.852
MEX3A
Ochotona princeps
ENSOPRG00000002937
I
0.852
MEX3A
Bos taurus
ENSBTAG00000019158
I
0.852
MEX3A
Tursiops truncatus
ENSTTRG00000013346
I
0.844
CBN24563
Caenorhabditis brenneri
CBN24563
I
0.844
CBN20397
Caenorhabditis brenneri
CBN20397
I
0.844
Q2YDI4_BOVIN
Bos taurus
ENSBTAG00000014886
I
0.843
MEX3C
Anolis carolinensis
ENSACAG00000010265
I
0.843
MEX3C
Ornithorhynchus anatinus
ENSOANG00000008116
I
0.843
ENSOCUG00000014295
Oryctolagus cuniculus
ENSOCUG00000014295
I
0.836
MEX3C
Sorex araneus
ENSSARG00000006940
I
0.835
MEX3C
Microcebus murinus
ENSMICG00000005815
I
0.835
MEX3C
Myotis lucifugus
ENSMLUG00000012585
I
0.835
MEX3C
Macropus eugenii
ENSMEUG00000015929
I
0.835
MEX3C
Tupaia belangeri
ENSTBEG00000014438
I
0.835
Mex3c
Dipodomys ordii
ENSDORG00000007962
I
0.835
MEX3C
Vicugna pacos
ENSVPAG00000003137
I
0.835
MEX3C
Erinaceus europaeus
ENSEEUG00000010864
I
0.835
mex-3
Caenorhabditis elegans
F53G12.5
I
0.828
CRE03823
Caenorhabditis remanei
CRE03823
I
0.828
CBG05100
Caenorhabditis briggsae
CBG05100
I
0.828
MEX3D
Meleagris gallopavo
ENSMGAG00000002325
I
0.828
MEX3C
Echinops telfairi
ENSETEG00000003647
I
0.826
Mex3b
Mus musculus
ENSMUSG00000057706
I
0.818
D3ZFL6_RAT
Rattus norvegicus
ENSRNOG00000025142
I
0.818
MEX3B
Anolis carolinensis
ENSACAG00000011072
I
0.818
MEX3B
Oryctolagus cuniculus
ENSOCUG00000011603
I
0.818
MEX3B
Canis familiaris
ENSCAFG00000013759
I
0.818
MEX3D
Gallus gallus
ENSGALG00000001106
I
0.818
Aqu1.215178
Amphimedon queenslandica
Aqu1.215178
I
0.811
CJA18034
Caenorhabditis japonica
CJA18034
I
0.811
MEX3B
Procavia capensis
ENSPCAG00000014150
I
0.810
MEX3B
Sorex araneus
ENSSARG00000006007
I
0.810
MEX3A
Pteropus vampyrus
ENSPVAG00000010333
I
0.795
MEX3D
Canis familiaris
ENSCAFG00000023712
I
0.785
MEX3D
Bos taurus
ENSBTAG00000044028
I
0.785
MEX3A
Microcebus murinus
ENSMICG00000002233
I
0.779
Ame_R011921
Ailuropoda melanoleuca
Ame_R011921
I
0.779
MEX3D
Ochotona princeps
ENSOPRG00000008708
I
0.777
MEX3C
Danio rerio
ENSDARG00000068971
I
0.777
MEX3D
Felis catus
ENSFCAG00000002615
I
0.777
MEX3D
Procavia capensis
ENSPCAG00000010972
I
0.769
MEX3B
Otolemur garnettii
ENSOGAG00000016362
I
0.769
CPIJ010634
Culex quinquefasciatus
CPIJ010634
I
0.762
AGAP013259
Anopheles gambiae
AGAP013259
I
0.762
AAEL012708
Aedes aegypti
AAEL012708
I
0.762
PHUM418100
Pediculus humanus
PHUM418100
I
0.762
CpipJ_CPIJ010634
Culex pipiens
CpipJ_CPIJ010634
I
0.762
MEX3D
Myotis lucifugus
ENSMLUG00000017018
N
0.754
SNAPOd2T00016811001
Oikopleura dioica
SNAPOd2T00016811001
I
0.746
MKNK2
Callithrix jacchus
ENSCJAG00000000539
I
0.746
BGIBMGA012436
Bombyx mori
BGIBMGA012436
I
0.730
MEX3A
Taeniopygia guttata
ENSTGUG00000003692
N
0.721
MEX3A
Meleagris gallopavo
ENSMGAG00000015563
N
0.721
MEX3A
Gallus gallus
ENSGALG00000014016
N
0.721
e_gw1.3.1475.1
Trichoplax adhaerens
e_gw1.3.1475.1
I
0.721
MEX3A
Anolis carolinensis
ENSACAG00000003739
N
0.713
mex3a
Xenopus tropicalis
ENSXETG00000012704
N
0.713
MEX3A
Sorex araneus
ENSSARG00000009868
N
0.711
e_gw1.312.50.1
Capitella teleta
e_gw1.312.50.1
I
0.711
MEX3A
Gasterosteus aculeatus
ENSGACG00000013282
N
0.711
MEX3A
Myotis lucifugus
ENSMLUG00000010185
N
0.711
MEX3A
Pan troglodytes
ENSPTRG00000030373
N
0.711
MEX3A
Takifugu rubripes
ENSTRUG00000007796
N
0.705
LOC100063974
Equus caballus
ENSECAG00000007279
N
0.705
MEX3A
Loxodonta africana
ENSLAFG00000009220
N
0.705
MEX3A
Tetraodon nigroviridis
ENSTNIG00000004473
N
0.705