CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MEX3A
(
Oryctolagus cuniculus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSOCUG00000005640
T19184_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
CG11360
M122_0.6
Drosophila melanogaster
GAGUDW
RNAcompete
Ray et al.(2013)
RNCMPT00129
0.818
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000015993
KH
133
193
TECVPVPTSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFMVTGRREDVATARREI
ENSOCUP00000015993
KH
225
284
TIRVRVPYRVVGLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEI
Links
Other
KH
family RBPs
Other
Oryctolagus cuniculus
RBPs
149 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MEX3A
Bos taurus
ENSBTAG00000019158
I
1.000
ENSPPYG00000000729
Pongo pygmaeus
ENSPPYG00000000729
I
1.000
MEX3A
Gorilla gorilla
ENSGGOG00000004513
I
1.000
Mex3a
Dipodomys ordii
ENSDORG00000002921
I
1.000
MEX3A
Macaca mulatta
ENSMMUG00000022307
I
1.000
MEX3A
Cavia porcellus
ENSCPOG00000020219
I
1.000
MEX3A
Monodelphis domestica
ENSMODG00000016954
I
1.000
MEX3A
Ochotona princeps
ENSOPRG00000002937
I
1.000
LOC100410413
Callithrix jacchus
ENSCJAG00000007711
I
1.000
Ame_R015561
Ailuropoda melanoleuca
Ame_R015561
I
1.000
AAI30196
Xenopus laevis
AAI30196
I
0.983
MEX3A
Tursiops truncatus
ENSTTRG00000013346
I
0.983
MEX3A
Pteropus vampyrus
ENSPVAG00000010333
I
0.942
MEX3A
Microcebus murinus
ENSMICG00000002233
I
0.909
MEX3A
Danio rerio
ENSDARG00000076638
I
0.909
ENSCPOG00000008241
Cavia porcellus
ENSCPOG00000008241
I
0.885
MEX3B
Danio rerio
ENSDARG00000058369
I
0.885
MEX3B
Loxodonta africana
ENSLAFG00000006027
I
0.877
MEX3B
Bos taurus
ENSBTAG00000016630
I
0.877
MEX3B
Gorilla gorilla
ENSGGOG00000000597
I
0.877
MEX3B
Tetraodon nigroviridis
ENSTNIG00000003398
I
0.877
MEX3B
Takifugu rubripes
ENSTRUG00000000367
I
0.877
MEX3B
Pteropus vampyrus
ENSPVAG00000000093
I
0.877
ENSPPYG00000006723
Pongo pygmaeus
ENSPPYG00000006723
I
0.877
MEX3B
Monodelphis domestica
ENSMODG00000019387
I
0.877
MEX3B
Ochotona princeps
ENSOPRG00000009604
I
0.877
MEX3B
Pan troglodytes
ENSPTRG00000007373
I
0.877
Ame_R007174
Ailuropoda melanoleuca
Ame_R007174
I
0.877
MEX3B
Macaca mulatta
ENSMMUG00000018639
I
0.877
MEX3B
Equus caballus
ENSECAG00000013497
I
0.877
MEX3B
Homo sapiens
ENSG00000183496
I
0.877
MEX3B
Callithrix jacchus
ENSCJAG00000008043
I
0.877
MEX3B
Macropus eugenii
ENSMEUG00000002402
I
0.869
AAI30070
Xenopus laevis
AAI30070
I
0.869
estExt_fgenesh2_pg.C_2010087
Branchiostoma floridae
estExt_fgenesh2_pg.C_2010087
I
0.869
A1L3F4
Xenopus laevis
A1L3F4
I
0.869
BAH79688
Xenopus laevis
BAH79688
I
0.869
MEX3C
Procavia capensis
ENSPCAG00000009258
I
0.861
gw.320.9.1
Nematostella vectensis
gw.320.9.1
I
0.860
XP_001175528.1
Strongylocentrotus purpuratus
XP_001175528.1
I
0.852
XP_786425.2
Strongylocentrotus purpuratus
XP_786425.2
I
0.852
Ame_R004658
Ailuropoda melanoleuca
Ame_R004658
I
0.852
estExt_Genewise1.C_sca_540218
Lottia gigantea
estExt_Genewise1.C_sca_540218
I
0.852
MEX3C
Choloepus hoffmanni
ENSCHOG00000004915
I
0.852
ENSCING00000002603
Ciona intestinalis
ENSCING00000002603
I
0.852
LOC100410023
Callithrix jacchus
ENSCJAG00000001902
I
0.852
MEX3C
Gasterosteus aculeatus
ENSGACG00000007490
I
0.852
MEX3C
Monodelphis domestica
ENSMODG00000011001
I
0.852
MEX3C
Macaca mulatta
ENSMMUG00000023652
I
0.852
MEX3C
Pteropus vampyrus
ENSPVAG00000015135
I
0.852
MEX3C
Pan troglodytes
ENSPTRG00000010029
I
0.852
MEX3C
Oryzias latipes
ENSORLG00000004985
I
0.852
ENSOCUG00000012549
Oryctolagus cuniculus
ENSOCUG00000012549
I
0.852
Mex3c
Mus musculus
ENSMUSG00000037253
I
0.852
Mex3c
Rattus norvegicus
ENSRNOG00000015777
I
0.852
MEX3C
Loxodonta africana
ENSLAFG00000027818
I
0.852
MEX3C
Homo sapiens
ENSG00000176624
I
0.852
MEX3C
Equus caballus
ENSECAG00000021727
I
0.852
MEX3C
Dasypus novemcinctus
ENSDNOG00000006544
I
0.852
MEX3C
Cavia porcellus
ENSCPOG00000009646
I
0.852
MEX3C
Tursiops truncatus
ENSTTRG00000004570
I
0.852
MEX3C
Gorilla gorilla
ENSGGOG00000014875
I
0.852
MEX3D
Gasterosteus aculeatus
ENSGACG00000015299
I
0.852
MEX3B
Gasterosteus aculeatus
ENSGACG00000012530
I
0.852
AAI28670
Xenopus laevis
AAI28670
I
0.844
amel4_ncbi_hmm6985
Apis mellifera
amel4_ncbi_hmm6985
I
0.844
mex3c
Xenopus tropicalis
ENSXETG00000022367
I
0.844
MEX3D
Takifugu rubripes
ENSTRUG00000007986
I
0.844
MEX3C
Takifugu rubripes
ENSTRUG00000011888
I
0.844
MEX3D
Tetraodon nigroviridis
ENSTNIG00000015325
I
0.844
MEX3A
Taeniopygia guttata
ENSTGUG00000003692
N
0.843
MEX3A
Meleagris gallopavo
ENSMGAG00000015563
N
0.843
MEX3A
Loxodonta africana
ENSLAFG00000009220
N
0.843
MEX3A
Gallus gallus
ENSGALG00000014016
N
0.843
LOC100063974
Equus caballus
ENSECAG00000007279
N
0.843
MEX3C
Canis familiaris
ENSCAFG00000000162
I
0.836
MEX3D
Macropus eugenii
ENSMEUG00000016404
I
0.836
MEX3B
Dasypus novemcinctus
ENSDNOG00000012736
I
0.836
e_gw1.15.409.1
Daphnia pulex
e_gw1.15.409.1
I
0.836
nasonia_NCBI_hmm456104
Nasonia vitripennis
nasonia_NCBI_hmm456104
I
0.836
MEX3D
Monodelphis domestica
ENSMODG00000004116
I
0.836
MEX3D
Taeniopygia guttata
ENSTGUG00000000201
I
0.836
MEX3A
Pan troglodytes
ENSPTRG00000030373
N
0.835
mex3a
Xenopus tropicalis
ENSXETG00000012704
N
0.835
MEX3A
Sorex araneus
ENSSARG00000009868
N
0.835
MEX3A
Myotis lucifugus
ENSMLUG00000010185
N
0.835
MEX3A
Anolis carolinensis
ENSACAG00000003739
N
0.835
GK13594
Drosophila willistoni
FBgn0215602
I
0.826
GJ18673
Drosophila virilis
FBgn0205827
I
0.826
mex-3
Caenorhabditis elegans
F53G12.5
I
0.826
XP_002168292.1
Hydra magnipapillata
XP_002168292.1
I
0.826
GH23938
Drosophila grimshawi
FBgn0131395
I
0.826
Mex3d
Rattus norvegicus
ENSRNOG00000030830
I
0.820
MEX3B
Cavia porcellus
ENSCPOG00000023663
I
0.820
MEX3D
Pan troglodytes
ENSPTRG00000010208
I
0.820
MEX3D
Gorilla gorilla
ENSGGOG00000001083
I
0.820
ENSPPYG00000009324
Pongo pygmaeus
ENSPPYG00000009324
I
0.820
MEX3D
Homo sapiens
ENSG00000181588
I
0.820
Mex3d
Mus musculus
ENSMUSG00000048696
I
0.820
MEX3D
Tursiops truncatus
ENSTTRG00000008132
I
0.820
CG11360
Drosophila melanogaster
FBgn0039920
D
0.818
GA10947-RA
Drosophila pseudoobscura
FBgn0071003
I
0.818
GF20555
Drosophila ananassae
FBgn0097561
I
0.818
CBN20397
Caenorhabditis brenneri
CBN20397
I
0.818
CBN24563
Caenorhabditis brenneri
CBN24563
I
0.818
CRE03823
Caenorhabditis remanei
CRE03823
I
0.818
GE14558
Drosophila yakuba
FBgn0232157
I
0.818
GL18139
Drosophila persimilis
FBgn0155742
I
0.818
GD24410
Drosophila simulans
FBgn0195748
I
0.818
GM26809
Drosophila sechellia
FBgn0181661
I
0.818
GG16398
Drosophila erecta
FBgn0108630
I
0.818
AAI42552
Xenopus laevis
AAI42552
I
0.811
CJA18034
Caenorhabditis japonica
CJA18034
I
0.810
AAI30114
Xenopus laevis
AAI30114
I
0.803
AAI33220
Xenopus laevis
AAI33220
I
0.803
MEX3D
Ornithorhynchus anatinus
ENSOANG00000011764
I
0.803
CBG05100
Caenorhabditis briggsae
CBG05100
I
0.802
Aqu1.215178
Amphimedon queenslandica
Aqu1.215178
I
0.777
ENSOCUG00000014295
Oryctolagus cuniculus
ENSOCUG00000014295
I
0.752
AGAP013259
Anopheles gambiae
AGAP013259
I
0.752
AAEL012708
Aedes aegypti
AAEL012708
I
0.752
CpipJ_CPIJ010634
Culex pipiens
CpipJ_CPIJ010634
I
0.752
MEX3A
Tetraodon nigroviridis
ENSTNIG00000004473
N
0.752
CPIJ010634
Culex quinquefasciatus
CPIJ010634
I
0.752
MEX3A
Takifugu rubripes
ENSTRUG00000007796
N
0.752
MEX3A
Gasterosteus aculeatus
ENSGACG00000013282
N
0.744
MEX3B
Procavia capensis
ENSPCAG00000014150
I
0.736
MEX3B
Sorex araneus
ENSSARG00000006007
I
0.736
D3ZFL6_RAT
Rattus norvegicus
ENSRNOG00000025142
I
0.730
MEX3B
Oryctolagus cuniculus
ENSOCUG00000011603
I
0.730
MEX3B
Canis familiaris
ENSCAFG00000013759
I
0.730
Mex3b
Mus musculus
ENSMUSG00000057706
I
0.730
SNAPOd2T00016811001
Oikopleura dioica
SNAPOd2T00016811001
I
0.727
e_gw1.3.1475.1
Trichoplax adhaerens
e_gw1.3.1475.1
I
0.727
MEX3B
Anolis carolinensis
ENSACAG00000011072
I
0.721
MEX3D
Meleagris gallopavo
ENSMGAG00000002325
I
0.721
MEX3C
Echinops telfairi
ENSETEG00000003647
I
0.719
MEX3C
Erinaceus europaeus
ENSEEUG00000010864
I
0.711
MEX3C
Vicugna pacos
ENSVPAG00000003137
I
0.711
Mex3c
Dipodomys ordii
ENSDORG00000007962
I
0.711
MEX3C
Myotis lucifugus
ENSMLUG00000012585
I
0.711
MEX3C
Tupaia belangeri
ENSTBEG00000014438
I
0.711
MEX3C
Microcebus murinus
ENSMICG00000005815
I
0.711
MEX3C
Macropus eugenii
ENSMEUG00000015929
I
0.711
MEX3C
Sorex araneus
ENSSARG00000006940
I
0.711
MEX3C
Anolis carolinensis
ENSACAG00000010265
I
0.705
MEX3C
Ornithorhynchus anatinus
ENSOANG00000008116
I
0.705
MEX3D
Gallus gallus
ENSGALG00000001106
I
0.705
Q2YDI4_BOVIN
Bos taurus
ENSBTAG00000014886
I
0.705