amel4_ncbi_hmm6985 (Apis mellifera)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 amel4_ncbi_hmm6985 T17993_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG11360
M122_0.6 		Drosophila melanogaster GAGUDW RNAcompete
Ray et al.(2013)
RNCMPT00129 		0.869
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
amel4_ncbi_hmm6985 KH 82 142
amel4_ncbi_hmm6985 KH 179 238

Links

Other KH family RBPs
Other Apis mellifera RBPs

156 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
nasonia_NCBI_hmm456104 Nasonia vitripennis nasonia_NCBI_hmm456104 I 0.983
estExt_Genewise1.C_sca_540218 Lottia gigantea estExt_Genewise1.C_sca_540218 I 0.950
estExt_fgenesh2_pg.C_2010087 Branchiostoma floridae estExt_fgenesh2_pg.C_2010087 I 0.942
MEX3B Pteropus vampyrus ENSPVAG00000000093 I 0.934
Ame_R007174 Ailuropoda melanoleuca Ame_R007174 I 0.934
MEX3B Gorilla gorilla ENSGGOG00000000597 I 0.934
MEX3B Monodelphis domestica ENSMODG00000019387 I 0.934
MEX3B Loxodonta africana ENSLAFG00000006027 I 0.934
MEX3B Homo sapiens ENSG00000183496 I 0.934
MEX3B Macaca mulatta ENSMMUG00000018639 I 0.934
MEX3B Equus caballus ENSECAG00000013497 I 0.934
MEX3B Bos taurus ENSBTAG00000016630 I 0.934
MEX3B Callithrix jacchus ENSCJAG00000008043 I 0.934
MEX3B Pan troglodytes ENSPTRG00000007373 I 0.934
MEX3C Procavia capensis ENSPCAG00000009258 I 0.934
ENSPPYG00000006723 Pongo pygmaeus ENSPPYG00000006723 I 0.934
XP_786425.2 Strongylocentrotus purpuratus XP_786425.2 I 0.934
MEX3B Ochotona princeps ENSOPRG00000009604 I 0.934
XP_001175528.1 Strongylocentrotus purpuratus XP_001175528.1 I 0.934
ENSCPOG00000008241 Cavia porcellus ENSCPOG00000008241 I 0.926
MEX3C Pan troglodytes ENSPTRG00000010029 I 0.926
MEX3C Takifugu rubripes ENSTRUG00000011888 I 0.926
MEX3C Equus caballus ENSECAG00000021727 I 0.926
MEX3C Oryzias latipes ENSORLG00000004985 I 0.926
MEX3C Macaca mulatta ENSMMUG00000023652 I 0.926
MEX3C Homo sapiens ENSG00000176624 I 0.926
MEX3C Tursiops truncatus ENSTTRG00000004570 I 0.926
MEX3C Loxodonta africana ENSLAFG00000027818 I 0.926
MEX3B Macropus eugenii ENSMEUG00000002402 I 0.926
MEX3C Gorilla gorilla ENSGGOG00000014875 I 0.926
MEX3C Choloepus hoffmanni ENSCHOG00000004915 I 0.926
BAH79688 Xenopus laevis BAH79688 I 0.926
MEX3C Monodelphis domestica ENSMODG00000011001 I 0.926
AAI30070 Xenopus laevis AAI30070 I 0.926
MEX3C Cavia porcellus ENSCPOG00000009646 I 0.926
Ame_R004658 Ailuropoda melanoleuca Ame_R004658 I 0.926
LOC100410023 Callithrix jacchus ENSCJAG00000001902 I 0.926
ENSCING00000002603 Ciona intestinalis ENSCING00000002603 I 0.926
A1L3F4 Xenopus laevis A1L3F4 I 0.926
MEX3C Dasypus novemcinctus ENSDNOG00000006544 I 0.926
MEX3C Pteropus vampyrus ENSPVAG00000015135 I 0.926
Mex3c Mus musculus ENSMUSG00000037253 I 0.926
ENSOCUG00000012549 Oryctolagus cuniculus ENSOCUG00000012549 I 0.926
Mex3c Rattus norvegicus ENSRNOG00000015777 I 0.926
MEX3B Danio rerio ENSDARG00000058369 I 0.926
MEX3B Tetraodon nigroviridis ENSTNIG00000003398 I 0.917
MEX3B Takifugu rubripes ENSTRUG00000000367 I 0.917
mex3c Xenopus tropicalis ENSXETG00000022367 I 0.917
MEX3C Gasterosteus aculeatus ENSGACG00000007490 I 0.917
e_gw1.15.409.1 Daphnia pulex e_gw1.15.409.1 I 0.917
AAI28670 Xenopus laevis AAI28670 I 0.917
MEX3B Gasterosteus aculeatus ENSGACG00000012530 I 0.901
MEX3C Canis familiaris ENSCAFG00000000162 I 0.901
gw.320.9.1 Nematostella vectensis gw.320.9.1 I 0.893
MEX3B Dasypus novemcinctus ENSDNOG00000012736 I 0.893
GK13594 Drosophila willistoni FBgn0215602 I 0.885
GH23938 Drosophila grimshawi FBgn0131395 I 0.885
GJ18673 Drosophila virilis FBgn0205827 I 0.885
GF20555 Drosophila ananassae FBgn0097561 I 0.877
MEX3D Taeniopygia guttata ENSTGUG00000000201 I 0.877
MEX3D Monodelphis domestica ENSMODG00000004116 I 0.877
MEX3D Macropus eugenii ENSMEUG00000016404 I 0.877
CG11360 Drosophila melanogaster FBgn0039920 D 0.869
GE14558 Drosophila yakuba FBgn0232157 I 0.869
GL18139 Drosophila persimilis FBgn0155742 I 0.869
GG16398 Drosophila erecta FBgn0108630 I 0.869
GA10947-RA Drosophila pseudoobscura FBgn0071003 I 0.869
XP_002168292.1 Hydra magnipapillata XP_002168292.1 I 0.869
MEX3D Tetraodon nigroviridis ENSTNIG00000015325 I 0.869
GM26809 Drosophila sechellia FBgn0181661 I 0.869
MEX3D Takifugu rubripes ENSTRUG00000007986 I 0.869
GD24410 Drosophila simulans FBgn0195748 I 0.869
MEX3D Pan troglodytes ENSPTRG00000010208 I 0.861
MEX3D Gorilla gorilla ENSGGOG00000001083 I 0.861
ENSPPYG00000009324 Pongo pygmaeus ENSPPYG00000009324 I 0.861
MEX3D Gasterosteus aculeatus ENSGACG00000015299 I 0.861
Mex3d Rattus norvegicus ENSRNOG00000030830 I 0.861
MEX3D Homo sapiens ENSG00000181588 I 0.861
MEX3B Cavia porcellus ENSCPOG00000023663 I 0.861
MEX3D Tursiops truncatus ENSTTRG00000008132 I 0.861
Mex3d Mus musculus ENSMUSG00000048696 I 0.861
MEX3A Danio rerio ENSDARG00000076638 I 0.852
AAI42552 Xenopus laevis AAI42552 I 0.852
AAI30196 Xenopus laevis AAI30196 I 0.852
AAI33220 Xenopus laevis AAI33220 I 0.844
AAI30114 Xenopus laevis AAI30114 I 0.844
Ame_R015561 Ailuropoda melanoleuca Ame_R015561 I 0.844
ENSPPYG00000000729 Pongo pygmaeus ENSPPYG00000000729 I 0.844
MEX3A Oryctolagus cuniculus ENSOCUG00000005640 I 0.844
MEX3D Ornithorhynchus anatinus ENSOANG00000011764 I 0.844
MEX3A Monodelphis domestica ENSMODG00000016954 I 0.844
Mex3a Dipodomys ordii ENSDORG00000002921 I 0.844
MEX3A Macaca mulatta ENSMMUG00000022307 I 0.844
MEX3A Bos taurus ENSBTAG00000019158 I 0.844
MEX3A Gorilla gorilla ENSGGOG00000004513 I 0.844
MEX3A Cavia porcellus ENSCPOG00000020219 I 0.844
LOC100410413 Callithrix jacchus ENSCJAG00000007711 I 0.844
MEX3A Ochotona princeps ENSOPRG00000002937 I 0.844
MEX3A Tursiops truncatus ENSTTRG00000013346 I 0.836
CRE03823 Caenorhabditis remanei CRE03823 I 0.836
mex-3 Caenorhabditis elegans F53G12.5 I 0.828
CBN24563 Caenorhabditis brenneri CBN24563 I 0.820
CBN20397 Caenorhabditis brenneri CBN20397 I 0.820
CJA18034 Caenorhabditis japonica CJA18034 I 0.811
Aqu1.215178 Amphimedon queenslandica Aqu1.215178 I 0.803
CBG05100 Caenorhabditis briggsae CBG05100 I 0.803
BGIBMGA012436 Bombyx mori BGIBMGA012436 I 0.787
MEX3A Microcebus murinus ENSMICG00000002233 I 0.787
MEX3A Pteropus vampyrus ENSPVAG00000010333 I 0.787
PHUM418100 Pediculus humanus PHUM418100 I 0.779
MEX3B Canis familiaris ENSCAFG00000013759 I 0.777
Mex3b Mus musculus ENSMUSG00000057706 I 0.777
MEX3B Oryctolagus cuniculus ENSOCUG00000011603 I 0.777
D3ZFL6_RAT Rattus norvegicus ENSRNOG00000025142 I 0.777
MEX3D Meleagris gallopavo ENSMGAG00000002325 I 0.770
CPIJ010634 Culex quinquefasciatus CPIJ010634 I 0.770
AAEL012708 Aedes aegypti AAEL012708 I 0.770
CpipJ_CPIJ010634 Culex pipiens CpipJ_CPIJ010634 I 0.770
AGAP013259 Anopheles gambiae AGAP013259 I 0.770
ENSOCUG00000014295 Oryctolagus cuniculus ENSOCUG00000014295 I 0.770
MEX3C Echinops telfairi ENSETEG00000003647 I 0.769
MEX3B Anolis carolinensis ENSACAG00000011072 I 0.769
MEX3C Anolis carolinensis ENSACAG00000010265 I 0.769
MEX3B Sorex araneus ENSSARG00000006007 I 0.769
Q2YDI4_BOVIN Bos taurus ENSBTAG00000014886 I 0.769
MEX3B Procavia capensis ENSPCAG00000014150 I 0.769
MEX3C Ornithorhynchus anatinus ENSOANG00000008116 I 0.769
MEX3D Gallus gallus ENSGALG00000001106 I 0.760
MEX3C Myotis lucifugus ENSMLUG00000012585 I 0.760
MEX3C Microcebus murinus ENSMICG00000005815 I 0.760
Mex3c Dipodomys ordii ENSDORG00000007962 I 0.760
MEX3C Vicugna pacos ENSVPAG00000003137 I 0.760
MEX3C Tupaia belangeri ENSTBEG00000014438 I 0.760
MEX3C Sorex araneus ENSSARG00000006940 I 0.760
MEX3C Macropus eugenii ENSMEUG00000015929 I 0.760
MEX3C Erinaceus europaeus ENSEEUG00000010864 I 0.760
SNAPOd2T00016811001 Oikopleura dioica SNAPOd2T00016811001 I 0.746
MEX3B Otolemur garnettii ENSOGAG00000016362 I 0.744
MEX3D Bos taurus ENSBTAG00000044028 I 0.744
MEX3D Canis familiaris ENSCAFG00000023712 I 0.744
Ame_R011921 Ailuropoda melanoleuca Ame_R011921 I 0.738
MEX3D Procavia capensis ENSPCAG00000010972 I 0.736
MEX3D Felis catus ENSFCAG00000002615 I 0.736
MEX3C Danio rerio ENSDARG00000068971 I 0.736
e_gw1.312.50.1 Capitella teleta e_gw1.312.50.1 I 0.736
MEX3D Ochotona princeps ENSOPRG00000008708 I 0.736
MEX3D Myotis lucifugus ENSMLUG00000017018 N 0.721
e_gw1.3.1475.1 Trichoplax adhaerens e_gw1.3.1475.1 I 0.721
MEX3A Taeniopygia guttata ENSTGUG00000003692 N 0.705
MEX3A Gallus gallus ENSGALG00000014016 N 0.705
MKNK2 Callithrix jacchus ENSCJAG00000000539 I 0.705
MEX3A Meleagris gallopavo ENSMGAG00000015563 N 0.705
MEX3A Myotis lucifugus ENSMLUG00000010185 N 0.702
MEX3A Gasterosteus aculeatus ENSGACG00000013282 N 0.702
MEX3A Sorex araneus ENSSARG00000009868 N 0.702
MEX3A Pan troglodytes ENSPTRG00000030373 N 0.702