RBMS1 (Sorex araneus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSARG00000011085 T41355_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMS1
M143_0.6 		Homo sapiens KAUAUAS RNAcompete
Ray et al.(2013)
RNCMPT00152 		0.821
RBMS3
M164_0.6 		Homo sapiens HAUAUA RNAcompete
Ray et al.(2013)
RNCMPT00173 		0.726
RBMS3
M055_0.6 		Homo sapiens MUAUAKM RNAcompete
Ray et al.(2013)
RNCMPT00057 		0.726
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000010018 RRM 64 130
ENSSARP00000010018 RRM 143 187

Links

Other RRM family RBPs
Other Sorex araneus RBPs

107 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBMS1 Ochotona princeps ENSOPRG00000012431 I 1.000
RBMS1 Echinops telfairi ENSETEG00000012135 I 1.000
RBMS1 Microcebus murinus ENSMICG00000008325 I 0.991
ENSGGOG00000011570 Gorilla gorilla ENSGGOG00000011570 I 0.929
RBMS2 Dasypus novemcinctus ENSDNOG00000011198 I 0.903
RBMS2 Sorex araneus ENSSARG00000012553 I 0.894
RBMS3 Dasypus novemcinctus ENSDNOG00000016645 I 0.884
RBMS3 Macropus eugenii ENSMEUG00000004772 I 0.884
RBMS2 Otolemur garnettii ENSOGAG00000003534 I 0.875
RBMS1 Spermophilus tridecemlineatus ENSSTOG00000012501 I 0.835
RBMS1 Tursiops truncatus ENSTTRG00000011058 I 0.828
RBMS1_BOVIN Bos taurus ENSBTAG00000005180 I 0.828
Ame_R017740 Ailuropoda melanoleuca Ame_R017740 I 0.828
RBMS1 Pteropus vampyrus ENSPVAG00000010429 I 0.828
RBMS1 Sus scrofa ENSSSCG00000015888 I 0.828
Rbms1 Dipodomys ordii ENSDORG00000007103 I 0.828
RBMS1 Tarsius syrichta ENSTSYG00000005584 I 0.828
RBMS1 Oryctolagus cuniculus ENSOCUG00000017365 I 0.828
RBMS1 Macaca mulatta ENSMMUG00000016825 I 0.828
RBMS1 Canis familiaris ENSCAFG00000009922 I 0.828
RBMS1 Loxodonta africana ENSLAFG00000017217 I 0.828
RBMS1 Procavia capensis ENSPCAG00000009673 I 0.828
O73664_CHICK Gallus gallus ENSGALG00000011132 I 0.827
RBMS1 Taeniopygia guttata ENSTGUG00000006606 I 0.827
RBMS1 Meleagris gallopavo ENSMGAG00000011054 I 0.827
RBMS1 Cavia porcellus ENSCPOG00000012310 I 0.821
A6ML07_CALJA Callithrix jacchus ENSCJAG00000014861 I 0.821
RBMS1 Gorilla gorilla ENSGGOG00000001264 I 0.821
RBMS1 Monodelphis domestica ENSMODG00000005250 I 0.821
RBMS1 Pan troglodytes ENSPTRG00000012573 I 0.821
RBMS1 Homo sapiens ENSG00000153250 D 0.821
RBMS1 Ornithorhynchus anatinus ENSOANG00000006166 I 0.815
RBMS1 Otolemur garnettii ENSOGAG00000002900 I 0.813
RBMS1 Equus caballus ENSECAG00000019894 I 0.813
ENSPPYG00000012879 Pongo pygmaeus ENSPPYG00000012879 I 0.813
RBMS1 Vicugna pacos ENSVPAG00000002716 I 0.813
Rbms1 Rattus norvegicus ENSRNOG00000008482 I 0.813
RBMS1 Felis catus ENSFCAG00000012524 N 0.812
AAH43623 Xenopus laevis AAH43623 I 0.812
RBMS1 Anolis carolinensis ENSACAG00000011984 I 0.807
RBMS1 Tupaia belangeri ENSTBEG00000016156 I 0.806
RBMS1 Macropus eugenii ENSMEUG00000000746 N 0.796
Rbms1 Mus musculus ENSMUSG00000026970 I 0.791
RBMS2 Loxodonta africana ENSLAFG00000008251 I 0.784
ENSPPYG00000004665 Pongo pygmaeus ENSPPYG00000004665 I 0.784
RBMS2 Macaca mulatta ENSMMUG00000019330 I 0.784
RBMS2 Homo sapiens ENSG00000076067 I 0.784
RBMS2 Callithrix jacchus ENSCJAG00000010803 I 0.784
RBMS2 Pan troglodytes ENSPTRG00000005104 I 0.784
RBMS2 Oryctolagus cuniculus ENSOCUG00000006073 I 0.776
RBMS2 Cavia porcellus ENSCPOG00000008256 I 0.776
RBMS2 Sus scrofa ENSSSCG00000000402 I 0.776
RBMS2_BOVIN Bos taurus ENSBTAG00000017830 I 0.776
Rbms2 Dipodomys ordii ENSDORG00000009231 I 0.776
RBMS2 Pteropus vampyrus ENSPVAG00000007616 I 0.776
RBMS2 Vicugna pacos ENSVPAG00000004022 I 0.776
RBMS2 Canis familiaris ENSCAFG00000000134 I 0.774
ENSG00000213250 Homo sapiens ENSG00000213250 I 0.770
RBMS1 Tetraodon nigroviridis ENSTNIG00000016496 I 0.769
rbms2 Xenopus tropicalis ENSXETG00000021787 I 0.769
Rbms2 Mus musculus ENSMUSG00000040043 I 0.769
RBMS2 Oryzias latipes ENSORLG00000015426 I 0.769
RBMS2 Danio rerio ENSDARG00000056150 I 0.769
Ame_R003849 Ailuropoda melanoleuca Ame_R003849 I 0.767
Rbms2 Rattus norvegicus ENSRNOG00000003076 I 0.761
ENSGGOG00000028247 Gorilla gorilla ENSGGOG00000028247 I 0.761
RBMS2 Gasterosteus aculeatus ENSGACG00000000617 I 0.761
RBMS1 Danio rerio ENSDARG00000057768 I 0.759
RBMS2 Tupaia belangeri ENSTBEG00000009515 I 0.757
RBMS2 Oryzias latipes ENSORLG00000007807 I 0.754
RBMS2 Tetraodon nigroviridis ENSTNIG00000015056 I 0.752
RBMS2 Tetraodon nigroviridis ENSTNIG00000014563 I 0.748
RBMS2 Takifugu rubripes ENSTRUG00000008492 I 0.748
RBMS3 Gasterosteus aculeatus ENSGACG00000006377 I 0.748
RBMS2 Anolis carolinensis ENSACAG00000016623 I 0.748
RBMS2 Equus caballus ENSECAG00000013470 I 0.748
rbms3 Danio rerio ENSDARG00000044574 I 0.746
RBMS3 Takifugu rubripes ENSTRUG00000009128 I 0.746
RBMS2 Takifugu rubripes ENSTRUG00000006839 I 0.744
RBMS2 Ochotona princeps ENSOPRG00000001667 N 0.743
RBMS3 Tetraodon nigroviridis ENSTNIG00000013819 I 0.743
RBMS3 Tetraodon nigroviridis ENSTNIG00000013818 I 0.739
RBMS3 Homo sapiens ENSG00000144642 D 0.739
RBMS1 Oryzias latipes ENSORLG00000016818 I 0.739
RBMS2 Macropus eugenii ENSMEUG00000015616 I 0.739
RBMS3 Gasterosteus aculeatus ENSGACG00000003155 I 0.733
RBMS3 Macaca mulatta ENSMMUG00000004404 I 0.731
RBMS3 Cavia porcellus ENSCPOG00000006457 I 0.731
RBMS3 Loxodonta africana ENSLAFG00000000354 I 0.731
RBMS3 Sorex araneus ENSSARG00000000695 I 0.731
RBMS3 Tupaia belangeri ENSTBEG00000005362 I 0.731
RBMS3 Pan troglodytes ENSPTRG00000014709 I 0.731
RBMS3 Callithrix jacchus ENSCJAG00000004312 I 0.731
RBMS3 Oryzias latipes ENSORLG00000005370 I 0.731
RBMS3 Gallus gallus ENSGALG00000011439 I 0.731
RBMS3 Oryctolagus cuniculus ENSOCUG00000004840 I 0.731
RBMS3 Ornithorhynchus anatinus ENSOANG00000010529 I 0.731
RBMS3 Gorilla gorilla ENSGGOG00000007228 I 0.731
Rbms3 Mus musculus ENSMUSG00000039607 I 0.731
RBMS2 Gasterosteus aculeatus ENSGACG00000009332 I 0.731
RBMS3 Bos taurus ENSBTAG00000044062 I 0.731
RBMS1 Takifugu rubripes ENSTRUG00000005466 I 0.731
RBMS3 Monodelphis domestica ENSMODG00000015125 I 0.731
RBMS3 Ochotona princeps ENSOPRG00000006808 I 0.731
RBMS3 Tursiops truncatus ENSTTRG00000006202 I 0.724
RBMS1 Gasterosteus aculeatus ENSGACG00000005671 I 0.721
rbms1a Danio rerio ENSDARG00000074023 I 0.719