RBMS2 (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000015426 T40231_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMS1
M143_0.6 		Homo sapiens KAUAUAS RNAcompete
Ray et al.(2013)
RNCMPT00152 		0.911
RBMS3
M164_0.6 		Homo sapiens HAUAUA RNAcompete
Ray et al.(2013)
RNCMPT00173 		0.881
RBMS3
M055_0.6 		Homo sapiens MUAUAKM RNAcompete
Ray et al.(2013)
RNCMPT00057 		0.881
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000019310 RRM 50 116
ENSORLP00000019310 RRM 129 195
ENSORLP00000019313 RRM 45 112
ENSORLP00000019313 RRM 140 206

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

127 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBMS2 Gasterosteus aculeatus ENSGACG00000000617 I 0.993
RBMS2 Takifugu rubripes ENSTRUG00000008492 I 0.985
RBMS2 Tetraodon nigroviridis ENSTNIG00000014563 I 0.970
RBMS2 Danio rerio ENSDARG00000056150 I 0.963
rbms2 Xenopus tropicalis ENSXETG00000021787 I 0.940
RBMS2 Cavia porcellus ENSCPOG00000008256 I 0.933
RBMS2 Homo sapiens ENSG00000076067 I 0.933
RBMS2 Callithrix jacchus ENSCJAG00000010803 I 0.933
RBMS2 Macaca mulatta ENSMMUG00000019330 I 0.933
ENSPPYG00000004665 Pongo pygmaeus ENSPPYG00000004665 I 0.933
RBMS2 Pan troglodytes ENSPTRG00000005104 I 0.933
RBMS2 Loxodonta africana ENSLAFG00000008251 I 0.933
RBMS1 Anolis carolinensis ENSACAG00000011984 I 0.926
ENSG00000213250 Homo sapiens ENSG00000213250 I 0.926
RBMS1 Loxodonta africana ENSLAFG00000017217 I 0.925
RBMS1_BOVIN Bos taurus ENSBTAG00000005180 I 0.925
RBMS1 Tarsius syrichta ENSTSYG00000005584 I 0.925
RBMS1 Canis familiaris ENSCAFG00000009922 I 0.925
RBMS1 Gorilla gorilla ENSGGOG00000001264 I 0.925
RBMS1 Macaca mulatta ENSMMUG00000016825 I 0.925
RBMS2 Vicugna pacos ENSVPAG00000004022 I 0.925
A6ML07_CALJA Callithrix jacchus ENSCJAG00000014861 I 0.925
RBMS1 Sus scrofa ENSSSCG00000015888 I 0.925
RBMS1 Otolemur garnettii ENSOGAG00000002900 I 0.925
RBMS1 Tursiops truncatus ENSTTRG00000011058 I 0.925
RBMS1 Pteropus vampyrus ENSPVAG00000010429 I 0.925
RBMS2 Pteropus vampyrus ENSPVAG00000007616 I 0.925
Ame_R017740 Ailuropoda melanoleuca Ame_R017740 I 0.925
RBMS1 Pan troglodytes ENSPTRG00000012573 I 0.925
Rbms2 Dipodomys ordii ENSDORG00000009231 I 0.925
RBMS1 Oryctolagus cuniculus ENSOCUG00000017365 I 0.925
RBMS1 Procavia capensis ENSPCAG00000009673 I 0.925
RBMS2 Oryzias latipes ENSORLG00000007807 I 0.925
RBMS2 Sus scrofa ENSSSCG00000000402 I 0.925
Rbms1 Dipodomys ordii ENSDORG00000007103 I 0.925
RBMS2 Oryctolagus cuniculus ENSOCUG00000006073 I 0.925
RBMS1 Homo sapiens ENSG00000153250 D 0.925
RBMS1 Monodelphis domestica ENSMODG00000005250 I 0.919
RBMS2 Anolis carolinensis ENSACAG00000016623 I 0.919
RBMS1 Ornithorhynchus anatinus ENSOANG00000006166 I 0.919
RBMS2 Gasterosteus aculeatus ENSGACG00000009332 I 0.918
RBMS1 Spermophilus tridecemlineatus ENSSTOG00000012501 I 0.918
ENSPPYG00000012879 Pongo pygmaeus ENSPPYG00000012879 I 0.918
Rbms2 Mus musculus ENSMUSG00000040043 I 0.918
RBMS2_BOVIN Bos taurus ENSBTAG00000017830 I 0.918
RBMS1 Cavia porcellus ENSCPOG00000012310 I 0.918
RBMS2 Takifugu rubripes ENSTRUG00000006839 I 0.918
O73664_CHICK Gallus gallus ENSGALG00000011132 I 0.910
RBMS1 Equus caballus ENSECAG00000019894 I 0.910
RBMS2 Canis familiaris ENSCAFG00000000134 I 0.910
ENSGGOG00000028247 Gorilla gorilla ENSGGOG00000028247 I 0.910
RBMS1 Meleagris gallopavo ENSMGAG00000011054 I 0.910
AAH43623 Xenopus laevis AAH43623 I 0.910
Rbms1 Rattus norvegicus ENSRNOG00000008482 I 0.910
Rbms2 Rattus norvegicus ENSRNOG00000003076 I 0.910
RBMS2 Tetraodon nigroviridis ENSTNIG00000015056 I 0.910
RBMS1 Taeniopygia guttata ENSTGUG00000006606 I 0.910
RBMS1 Vicugna pacos ENSVPAG00000002716 I 0.910
Ame_R003849 Ailuropoda melanoleuca Ame_R003849 I 0.910
RBMS1 Tetraodon nigroviridis ENSTNIG00000016496 I 0.904
RBMS2 Equus caballus ENSECAG00000013470 I 0.904
RBMS1 Tupaia belangeri ENSTBEG00000016156 I 0.903
RBMS2 Macropus eugenii ENSMEUG00000015616 I 0.903
rbms3 Danio rerio ENSDARG00000044574 I 0.896
RBMS1 Danio rerio ENSDARG00000057768 I 0.888
Rbms1 Mus musculus ENSMUSG00000026970 I 0.888
RBMS3 Homo sapiens ENSG00000144642 D 0.881
RBMS3 Gallus gallus ENSGALG00000011439 I 0.881
RBMS3 Tetraodon nigroviridis ENSTNIG00000013818 I 0.881
RBMS3 Gasterosteus aculeatus ENSGACG00000003155 I 0.874
RBMS3 Ochotona princeps ENSOPRG00000006808 I 0.873
RBMS3 Oryzias latipes ENSORLG00000005370 I 0.873
RBMS3 Gorilla gorilla ENSGGOG00000007228 I 0.873
RBMS3 Macaca mulatta ENSMMUG00000004404 I 0.873
Rbms3 Mus musculus ENSMUSG00000039607 I 0.873
RBMS3 Ornithorhynchus anatinus ENSOANG00000010529 I 0.873
RBMS3 Oryctolagus cuniculus ENSOCUG00000004840 I 0.873
RBMS3 Loxodonta africana ENSLAFG00000000354 I 0.873
RBMS3 Monodelphis domestica ENSMODG00000015125 I 0.873
RBMS3 Cavia porcellus ENSCPOG00000006457 I 0.873
RBMS3 Takifugu rubripes ENSTRUG00000009128 I 0.873
RBMS3 Callithrix jacchus ENSCJAG00000004312 I 0.873
RBMS3 Tupaia belangeri ENSTBEG00000005362 I 0.873
RBMS3 Tursiops truncatus ENSTTRG00000006202 I 0.873
RBMS3 Bos taurus ENSBTAG00000044062 I 0.873
RBMS3 Sorex araneus ENSSARG00000000695 I 0.873
RBMS3 Pan troglodytes ENSPTRG00000014709 I 0.873
RBMS2 Tupaia belangeri ENSTBEG00000009515 I 0.868
RBMS1 Gasterosteus aculeatus ENSGACG00000005671 I 0.868
RBMS1 Takifugu rubripes ENSTRUG00000005466 I 0.867
RBMS3 Gasterosteus aculeatus ENSGACG00000006377 I 0.867
RBMS3 Tetraodon nigroviridis ENSTNIG00000013819 I 0.860
rbms1a Danio rerio ENSDARG00000074023 I 0.859
RBMS1 Oryzias latipes ENSORLG00000016818 I 0.859
RBMS3 Vicugna pacos ENSVPAG00000003842 I 0.830
RBMS3 Sus scrofa ENSSSCG00000011222 I 0.828
RBMS3 Myotis lucifugus ENSMLUG00000000659 I 0.813
RBMS2 Tursiops truncatus ENSTTRG00000002117 I 0.813
D4A288_RAT Rattus norvegicus ENSRNOG00000023845 I 0.803
RBMS3 Pteropus vampyrus ENSPVAG00000014037 I 0.784
RBMS1 Oryzias latipes ENSORLG00000003917 I 0.778
RBMS1 Takifugu rubripes ENSTRUG00000017155 I 0.778
RBMS2 Danio rerio ENSDARG00000044179 I 0.778
RBMS1 Microcebus murinus ENSMICG00000008325 I 0.776
ENSGGOG00000011570 Gorilla gorilla ENSGGOG00000011570 I 0.772
RBMS1 Gasterosteus aculeatus ENSGACG00000015174 I 0.770
RBMS1 Tetraodon nigroviridis ENSTNIG00000009477 I 0.770
RBMS1 Ochotona princeps ENSOPRG00000012431 I 0.769
RBMS1 Echinops telfairi ENSETEG00000012135 I 0.769
RBMS2 Felis catus ENSFCAG00000012028 I 0.769
RBMS1 Sorex araneus ENSSARG00000011085 I 0.769
rbms1 Xenopus tropicalis ENSXETG00000016204 I 0.763
RBMS2 Myotis lucifugus ENSMLUG00000000530 I 0.761
RBMS2 Dasypus novemcinctus ENSDNOG00000011198 I 0.748
RBMS2 Choloepus hoffmanni ENSCHOG00000007372 I 0.746
RBMS2 Sorex araneus ENSSARG00000012553 I 0.741
RBMS2 Procavia capensis ENSPCAG00000010311 I 0.739
RBMS2 Echinops telfairi ENSETEG00000010200 I 0.731
RBMS3 Choloepus hoffmanni ENSCHOG00000000758 I 0.731
RBMS3 Macropus eugenii ENSMEUG00000004772 I 0.731
RBMS3 Dasypus novemcinctus ENSDNOG00000016645 I 0.731
RBMS3 Erinaceus europaeus ENSEEUG00000014337 I 0.731
RBMS3 Echinops telfairi ENSETEG00000009485 I 0.709
RBMS2 Otolemur garnettii ENSOGAG00000003534 I 0.709
estExt_Genewise1.C_3340003 Capitella teleta estExt_Genewise1.C_3340003 I 0.706
RBMS3 Tarsius syrichta ENSTSYG00000002615 I 0.704