RBMS2 (Tetraodon nigroviridis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTNIG00000014563 T42124_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMS1
M143_0.6 		Homo sapiens KAUAUAS RNAcompete
Ray et al.(2013)
RNCMPT00152 		0.882
RBMS3
M164_0.6 		Homo sapiens HAUAUA RNAcompete
Ray et al.(2013)
RNCMPT00173 		0.852
RBMS3
M055_0.6 		Homo sapiens MUAUAKM RNAcompete
Ray et al.(2013)
RNCMPT00057 		0.852
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000002465 RRM 49 115
ENSTNIP00000002465 RRM 128 195
ENSTNIP00000017589 RRM 54 120
ENSTNIP00000017589 RRM 133 200

Links

Other RRM family RBPs
Other Tetraodon nigroviridis RBPs

123 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBMS2 Gasterosteus aculeatus ENSGACG00000000617 I 0.978
RBMS2 Oryzias latipes ENSORLG00000015426 I 0.970
RBMS2 Takifugu rubripes ENSTRUG00000008492 I 0.963
RBMS2 Danio rerio ENSDARG00000056150 I 0.933
rbms2 Xenopus tropicalis ENSXETG00000021787 I 0.911
RBMS2 Pan troglodytes ENSPTRG00000005104 I 0.904
RBMS2 Loxodonta africana ENSLAFG00000008251 I 0.904
RBMS2 Cavia porcellus ENSCPOG00000008256 I 0.904
RBMS2 Callithrix jacchus ENSCJAG00000010803 I 0.904
RBMS2 Homo sapiens ENSG00000076067 I 0.904
RBMS2 Macaca mulatta ENSMMUG00000019330 I 0.904
RBMS2 Gasterosteus aculeatus ENSGACG00000009332 I 0.904
ENSPPYG00000004665 Pongo pygmaeus ENSPPYG00000004665 I 0.904
RBMS2 Oryzias latipes ENSORLG00000007807 I 0.896
RBMS1 Otolemur garnettii ENSOGAG00000002900 I 0.896
RBMS2 Pteropus vampyrus ENSPVAG00000007616 I 0.896
A6ML07_CALJA Callithrix jacchus ENSCJAG00000014861 I 0.896
RBMS1 Pan troglodytes ENSPTRG00000012573 I 0.896
RBMS1 Homo sapiens ENSG00000153250 D 0.896
RBMS1 Procavia capensis ENSPCAG00000009673 I 0.896
Rbms1 Dipodomys ordii ENSDORG00000007103 I 0.896
RBMS1 Oryctolagus cuniculus ENSOCUG00000017365 I 0.896
RBMS1 Pteropus vampyrus ENSPVAG00000010429 I 0.896
RBMS2 Oryctolagus cuniculus ENSOCUG00000006073 I 0.896
Rbms2 Dipodomys ordii ENSDORG00000009231 I 0.896
RBMS1_BOVIN Bos taurus ENSBTAG00000005180 I 0.896
RBMS1 Spermophilus tridecemlineatus ENSSTOG00000012501 I 0.896
RBMS1 Tursiops truncatus ENSTTRG00000011058 I 0.896
RBMS1 Gorilla gorilla ENSGGOG00000001264 I 0.896
RBMS1 Tarsius syrichta ENSTSYG00000005584 I 0.896
RBMS1 Macaca mulatta ENSMMUG00000016825 I 0.896
RBMS1 Loxodonta africana ENSLAFG00000017217 I 0.896
RBMS2 Takifugu rubripes ENSTRUG00000006839 I 0.896
RBMS2 Vicugna pacos ENSVPAG00000004022 I 0.896
RBMS1 Sus scrofa ENSSSCG00000015888 I 0.896
RBMS1 Canis familiaris ENSCAFG00000009922 I 0.896
Ame_R017740 Ailuropoda melanoleuca Ame_R017740 I 0.896
RBMS2 Sus scrofa ENSSSCG00000000402 I 0.896
RBMS1 Anolis carolinensis ENSACAG00000011984 I 0.890
ENSG00000213250 Homo sapiens ENSG00000213250 I 0.890
RBMS2 Anolis carolinensis ENSACAG00000016623 I 0.890
RBMS1 Meleagris gallopavo ENSMGAG00000011054 I 0.889
RBMS1 Monodelphis domestica ENSMODG00000005250 I 0.889
O73664_CHICK Gallus gallus ENSGALG00000011132 I 0.889
Rbms2 Mus musculus ENSMUSG00000040043 I 0.889
RBMS1 Cavia porcellus ENSCPOG00000012310 I 0.889
AAH43623 Xenopus laevis AAH43623 I 0.889
Ame_R003849 Ailuropoda melanoleuca Ame_R003849 I 0.889
RBMS1 Taeniopygia guttata ENSTGUG00000006606 I 0.889
RBMS2 Tetraodon nigroviridis ENSTNIG00000015056 I 0.889
RBMS2 Canis familiaris ENSCAFG00000000134 I 0.889
RBMS2_BOVIN Bos taurus ENSBTAG00000017830 I 0.889
ENSPPYG00000012879 Pongo pygmaeus ENSPPYG00000012879 I 0.889
RBMS1 Tetraodon nigroviridis ENSTNIG00000016496 I 0.882
RBMS1 Ornithorhynchus anatinus ENSOANG00000006166 I 0.882
ENSGGOG00000028247 Gorilla gorilla ENSGGOG00000028247 I 0.881
Rbms2 Rattus norvegicus ENSRNOG00000003076 I 0.881
RBMS1 Vicugna pacos ENSVPAG00000002716 I 0.881
RBMS1 Equus caballus ENSECAG00000019894 I 0.881
Rbms1 Rattus norvegicus ENSRNOG00000008482 I 0.881
RBMS1 Tupaia belangeri ENSTBEG00000016156 I 0.874
RBMS2 Macropus eugenii ENSMEUG00000015616 I 0.874
RBMS2 Equus caballus ENSECAG00000013470 I 0.868
RBMS1 Danio rerio ENSDARG00000057768 I 0.867
rbms3 Danio rerio ENSDARG00000044574 I 0.867
Rbms1 Mus musculus ENSMUSG00000026970 I 0.859
RBMS2 Tupaia belangeri ENSTBEG00000009515 I 0.853
RBMS1 Gasterosteus aculeatus ENSGACG00000005671 I 0.853
RBMS3 Tetraodon nigroviridis ENSTNIG00000013818 I 0.852
RBMS3 Gallus gallus ENSGALG00000011439 I 0.852
RBMS3 Homo sapiens ENSG00000144642 D 0.852
RBMS1 Takifugu rubripes ENSTRUG00000005466 I 0.846
RBMS3 Gasterosteus aculeatus ENSGACG00000003155 I 0.846
RBMS3 Ornithorhynchus anatinus ENSOANG00000010529 I 0.844
RBMS3 Pan troglodytes ENSPTRG00000014709 I 0.844
RBMS3 Oryctolagus cuniculus ENSOCUG00000004840 I 0.844
RBMS3 Cavia porcellus ENSCPOG00000006457 I 0.844
RBMS3 Oryzias latipes ENSORLG00000005370 I 0.844
RBMS3 Takifugu rubripes ENSTRUG00000009128 I 0.844
rbms1a Danio rerio ENSDARG00000074023 I 0.844
RBMS3 Ochotona princeps ENSOPRG00000006808 I 0.844
Rbms3 Mus musculus ENSMUSG00000039607 I 0.844
RBMS3 Macaca mulatta ENSMMUG00000004404 I 0.844
RBMS3 Sorex araneus ENSSARG00000000695 I 0.844
RBMS3 Tursiops truncatus ENSTTRG00000006202 I 0.844
RBMS3 Tupaia belangeri ENSTBEG00000005362 I 0.844
RBMS3 Loxodonta africana ENSLAFG00000000354 I 0.844
RBMS3 Bos taurus ENSBTAG00000044062 I 0.844
RBMS3 Callithrix jacchus ENSCJAG00000004312 I 0.844
RBMS3 Monodelphis domestica ENSMODG00000015125 I 0.844
RBMS3 Gorilla gorilla ENSGGOG00000007228 I 0.844
RBMS1 Oryzias latipes ENSORLG00000016818 I 0.838
RBMS3 Gasterosteus aculeatus ENSGACG00000006377 I 0.838
RBMS3 Tetraodon nigroviridis ENSTNIG00000013819 I 0.832
RBMS3 Vicugna pacos ENSVPAG00000003842 I 0.801
RBMS3 Sus scrofa ENSSSCG00000011222 I 0.800
D4A288_RAT Rattus norvegicus ENSRNOG00000023845 I 0.796
RBMS2 Tursiops truncatus ENSTTRG00000002117 I 0.793
RBMS3 Myotis lucifugus ENSMLUG00000000659 I 0.785
rbms1 Xenopus tropicalis ENSXETG00000016204 I 0.763
RBMS2 Danio rerio ENSDARG00000044179 I 0.757
RBMS1 Microcebus murinus ENSMICG00000008325 I 0.756
RBMS3 Pteropus vampyrus ENSPVAG00000014037 I 0.756
ENSGGOG00000011570 Gorilla gorilla ENSGGOG00000011570 I 0.752
RBMS1 Oryzias latipes ENSORLG00000003917 I 0.750
RBMS1 Takifugu rubripes ENSTRUG00000017155 I 0.750
RBMS2 Myotis lucifugus ENSMLUG00000000530 I 0.748
RBMS1 Ochotona princeps ENSOPRG00000012431 I 0.748
RBMS1 Sorex araneus ENSSARG00000011085 I 0.748
RBMS1 Echinops telfairi ENSETEG00000012135 I 0.748
RBMS2 Felis catus ENSFCAG00000012028 I 0.748
RBMS1 Gasterosteus aculeatus ENSGACG00000015174 I 0.743
RBMS1 Tetraodon nigroviridis ENSTNIG00000009477 I 0.743
RBMS2 Dasypus novemcinctus ENSDNOG00000011198 I 0.728
RBMS2 Sorex araneus ENSSARG00000012553 I 0.721
RBMS2 Choloepus hoffmanni ENSCHOG00000007372 I 0.719
RBMS3 Dasypus novemcinctus ENSDNOG00000016645 I 0.711
RBMS2 Procavia capensis ENSPCAG00000010311 I 0.711
RBMS3 Macropus eugenii ENSMEUG00000004772 I 0.711
RBMS2 Echinops telfairi ENSETEG00000010200 I 0.704
RBMS3 Erinaceus europaeus ENSEEUG00000014337 I 0.704
RBMS3 Choloepus hoffmanni ENSCHOG00000000758 I 0.704