RBMS1 (Ornithorhynchus anatinus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSOANG00000006166 T39484_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMS1
M143_0.6 		Homo sapiens KAUAUAS RNAcompete
Ray et al.(2013)
RNCMPT00152 		0.970
RBMS3
M164_0.6 		Homo sapiens HAUAUA RNAcompete
Ray et al.(2013)
RNCMPT00173 		0.874
RBMS3
M055_0.6 		Homo sapiens MUAUAKM RNAcompete
Ray et al.(2013)
RNCMPT00057 		0.874
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000009862 RRM 66 133
ENSOANP00000009862 RRM 145 211
ENSOANP00000009863 RRM 2 53
ENSOANP00000009863 RRM 65 131

Links

Other RRM family RBPs
Other Ornithorhynchus anatinus RBPs

126 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBMS1 Monodelphis domestica ENSMODG00000005250 I 1.000
RBMS1 Loxodonta africana ENSLAFG00000017217 I 0.985
Rbms1 Dipodomys ordii ENSDORG00000007103 I 0.985
RBMS1 Procavia capensis ENSPCAG00000009673 I 0.985
RBMS1 Pteropus vampyrus ENSPVAG00000010429 I 0.985
RBMS1 Sus scrofa ENSSSCG00000015888 I 0.985
RBMS1 Macaca mulatta ENSMMUG00000016825 I 0.985
RBMS1 Canis familiaris ENSCAFG00000009922 I 0.985
RBMS1 Tursiops truncatus ENSTTRG00000011058 I 0.985
RBMS1 Anolis carolinensis ENSACAG00000011984 I 0.985
RBMS1 Tarsius syrichta ENSTSYG00000005584 I 0.985
RBMS1 Oryctolagus cuniculus ENSOCUG00000017365 I 0.985
RBMS1_BOVIN Bos taurus ENSBTAG00000005180 I 0.985
Ame_R017740 Ailuropoda melanoleuca Ame_R017740 I 0.978
RBMS1 Gorilla gorilla ENSGGOG00000001264 I 0.978
RBMS1 Equus caballus ENSECAG00000019894 I 0.978
RBMS1 Spermophilus tridecemlineatus ENSSTOG00000012501 I 0.978
A6ML07_CALJA Callithrix jacchus ENSCJAG00000014861 I 0.978
RBMS1 Cavia porcellus ENSCPOG00000012310 I 0.978
RBMS1 Vicugna pacos ENSVPAG00000002716 I 0.978
RBMS1 Homo sapiens ENSG00000153250 D 0.978
RBMS1 Pan troglodytes ENSPTRG00000012573 I 0.978
RBMS1 Otolemur garnettii ENSOGAG00000002900 I 0.970
Rbms1 Rattus norvegicus ENSRNOG00000008482 I 0.970
ENSPPYG00000012879 Pongo pygmaeus ENSPPYG00000012879 I 0.970
RBMS1 Tupaia belangeri ENSTBEG00000016156 I 0.963
O73664_CHICK Gallus gallus ENSGALG00000011132 I 0.963
RBMS1 Taeniopygia guttata ENSTGUG00000006606 I 0.963
RBMS1 Meleagris gallopavo ENSMGAG00000011054 I 0.963
Rbms1 Mus musculus ENSMUSG00000026970 I 0.956
AAH43623 Xenopus laevis AAH43623 I 0.941
RBMS1 Tetraodon nigroviridis ENSTNIG00000016496 I 0.933
RBMS2 Oryzias latipes ENSORLG00000015426 I 0.919
RBMS2 Macaca mulatta ENSMMUG00000019330 I 0.919
RBMS2 Takifugu rubripes ENSTRUG00000008492 I 0.919
RBMS2 Callithrix jacchus ENSCJAG00000010803 I 0.919
RBMS2 Loxodonta africana ENSLAFG00000008251 I 0.919
RBMS2 Pan troglodytes ENSPTRG00000005104 I 0.919
RBMS2 Homo sapiens ENSG00000076067 I 0.919
ENSPPYG00000004665 Pongo pygmaeus ENSPPYG00000004665 I 0.919
ENSG00000213250 Homo sapiens ENSG00000213250 I 0.919
Rbms2 Dipodomys ordii ENSDORG00000009231 I 0.911
RBMS2 Vicugna pacos ENSVPAG00000004022 I 0.911
RBMS2 Oryctolagus cuniculus ENSOCUG00000006073 I 0.911
RBMS2_BOVIN Bos taurus ENSBTAG00000017830 I 0.911
RBMS2 Sus scrofa ENSSSCG00000000402 I 0.911
RBMS2 Pteropus vampyrus ENSPVAG00000007616 I 0.911
rbms2 Xenopus tropicalis ENSXETG00000021787 I 0.911
RBMS2 Gasterosteus aculeatus ENSGACG00000000617 I 0.904
Rbms2 Mus musculus ENSMUSG00000040043 I 0.904
RBMS2 Oryzias latipes ENSORLG00000007807 I 0.904
RBMS2 Danio rerio ENSDARG00000056150 I 0.904
RBMS2 Equus caballus ENSECAG00000013470 I 0.904
RBMS2 Cavia porcellus ENSCPOG00000008256 I 0.904
Rbms2 Rattus norvegicus ENSRNOG00000003076 I 0.896
RBMS2 Canis familiaris ENSCAFG00000000134 I 0.896
ENSGGOG00000028247 Gorilla gorilla ENSGGOG00000028247 I 0.896
RBMS1 Danio rerio ENSDARG00000057768 I 0.889
RBMS2 Anolis carolinensis ENSACAG00000016623 I 0.889
RBMS1 Takifugu rubripes ENSTRUG00000005466 I 0.889
RBMS1 Oryzias latipes ENSORLG00000016818 I 0.889
Ame_R003849 Ailuropoda melanoleuca Ame_R003849 I 0.889
RBMS1 Gasterosteus aculeatus ENSGACG00000005671 I 0.882
RBMS2 Tetraodon nigroviridis ENSTNIG00000014563 I 0.882
RBMS3 Tetraodon nigroviridis ENSTNIG00000013818 I 0.881
RBMS3 Gasterosteus aculeatus ENSGACG00000003155 I 0.875
RBMS3 Homo sapiens ENSG00000144642 D 0.874
RBMS2 Gasterosteus aculeatus ENSGACG00000009332 I 0.874
rbms3 Danio rerio ENSDARG00000044574 I 0.874
RBMS2 Tetraodon nigroviridis ENSTNIG00000015056 I 0.874
RBMS2 Macropus eugenii ENSMEUG00000015616 I 0.874
RBMS3 Gasterosteus aculeatus ENSGACG00000006377 I 0.868
RBMS3 Tupaia belangeri ENSTBEG00000005362 I 0.867
RBMS3 Ochotona princeps ENSOPRG00000006808 I 0.867
RBMS3 Monodelphis domestica ENSMODG00000015125 I 0.867
RBMS3 Sorex araneus ENSSARG00000000695 I 0.867
Rbms3 Mus musculus ENSMUSG00000039607 I 0.867
RBMS3 Macaca mulatta ENSMMUG00000004404 I 0.867
RBMS3 Oryctolagus cuniculus ENSOCUG00000004840 I 0.867
RBMS3 Loxodonta africana ENSLAFG00000000354 I 0.867
RBMS3 Ornithorhynchus anatinus ENSOANG00000010529 I 0.867
RBMS2 Takifugu rubripes ENSTRUG00000006839 I 0.867
RBMS3 Takifugu rubripes ENSTRUG00000009128 I 0.867
RBMS3 Pan troglodytes ENSPTRG00000014709 I 0.867
RBMS3 Cavia porcellus ENSCPOG00000006457 I 0.867
RBMS3 Gallus gallus ENSGALG00000011439 I 0.867
RBMS3 Gorilla gorilla ENSGGOG00000007228 I 0.867
RBMS3 Callithrix jacchus ENSCJAG00000004312 I 0.867
RBMS3 Bos taurus ENSBTAG00000044062 I 0.867
RBMS2 Felis catus ENSFCAG00000012028 I 0.866
RBMS3 Tetraodon nigroviridis ENSTNIG00000013819 I 0.861
RBMS2 Tupaia belangeri ENSTBEG00000009515 I 0.860
RBMS3 Tursiops truncatus ENSTTRG00000006202 I 0.859
RBMS3 Oryzias latipes ENSORLG00000005370 I 0.859
rbms1a Danio rerio ENSDARG00000074023 I 0.853
RBMS2 Danio rerio ENSDARG00000044179 I 0.832
RBMS3 Choloepus hoffmanni ENSCHOG00000000758 I 0.824
RBMS3 Vicugna pacos ENSVPAG00000003842 I 0.824
RBMS3 Sus scrofa ENSSSCG00000011222 I 0.822
RBMS1 Ochotona princeps ENSOPRG00000012431 I 0.815
RBMS1 Echinops telfairi ENSETEG00000012135 I 0.815
RBMS1 Sorex araneus ENSSARG00000011085 I 0.815
RBMS3 Pteropus vampyrus ENSPVAG00000014037 I 0.813
RBMS1 Microcebus murinus ENSMICG00000008325 I 0.807
RBMS2 Tursiops truncatus ENSTTRG00000002117 I 0.807
RBMS1 Takifugu rubripes ENSTRUG00000017155 I 0.807
RBMS3 Myotis lucifugus ENSMLUG00000000659 I 0.807
RBMS1 Gasterosteus aculeatus ENSGACG00000015174 I 0.800
RBMS1 Oryzias latipes ENSORLG00000003917 I 0.800
RBMS1 Tetraodon nigroviridis ENSTNIG00000009477 I 0.800
RBMS3 Echinops telfairi ENSETEG00000009485 I 0.798
D4A288_RAT Rattus norvegicus ENSRNOG00000023845 I 0.790
rbms1 Xenopus tropicalis ENSXETG00000016204 I 0.787
ENSGGOG00000011570 Gorilla gorilla ENSGGOG00000011570 I 0.766
RBMS1 Macropus eugenii ENSMEUG00000000746 N 0.765
RBMS2 Myotis lucifugus ENSMLUG00000000530 I 0.748
RBMS2 Dasypus novemcinctus ENSDNOG00000011198 I 0.743
RBMS2 Choloepus hoffmanni ENSCHOG00000007372 I 0.741
RBMS2 Sorex araneus ENSSARG00000012553 I 0.735
RBMS2 Procavia capensis ENSPCAG00000010311 I 0.733
RBMS3 Dasypus novemcinctus ENSDNOG00000016645 I 0.726
RBMS2 Echinops telfairi ENSETEG00000010200 I 0.726
RBMS3 Macropus eugenii ENSMEUG00000004772 I 0.726
RBMS3 Erinaceus europaeus ENSEEUG00000014337 I 0.719
RBMS2 Otolemur garnettii ENSOGAG00000003534 I 0.711