RBMS1 (Meleagris gallopavo)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMGAG00000011054 T38416_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMS1
M143_0.6 		Homo sapiens KAUAUAS RNAcompete
Ray et al.(2013)
RNCMPT00152 		0.970
RBMS3
M164_0.6 		Homo sapiens HAUAUA RNAcompete
Ray et al.(2013)
RNCMPT00173 		0.852
RBMS3
M055_0.6 		Homo sapiens MUAUAKM RNAcompete
Ray et al.(2013)
RNCMPT00057 		0.852
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMGAP00000011553 RRM 48 114
ENSMGAP00000011553 RRM 127 192
ENSMGAP00000011559 RRM 47 113
ENSMGAP00000011559 RRM 126 191

Links

Other RRM family RBPs
Other Meleagris gallopavo RBPs

125 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBMS1 Taeniopygia guttata ENSTGUG00000006606 I 1.000
O73664_CHICK Gallus gallus ENSGALG00000011132 I 1.000
Ame_R017740 Ailuropoda melanoleuca Ame_R017740 I 0.985
RBMS1 Spermophilus tridecemlineatus ENSSTOG00000012501 I 0.985
RBMS1 Pteropus vampyrus ENSPVAG00000010429 I 0.978
RBMS1 Oryctolagus cuniculus ENSOCUG00000017365 I 0.978
RBMS1 Sus scrofa ENSSSCG00000015888 I 0.978
RBMS1 Tursiops truncatus ENSTTRG00000011058 I 0.978
RBMS1 Procavia capensis ENSPCAG00000009673 I 0.978
Rbms1 Dipodomys ordii ENSDORG00000007103 I 0.978
RBMS1 Canis familiaris ENSCAFG00000009922 I 0.978
RBMS1 Macaca mulatta ENSMMUG00000016825 I 0.978
RBMS1_BOVIN Bos taurus ENSBTAG00000005180 I 0.978
RBMS1 Tarsius syrichta ENSTSYG00000005584 I 0.978
RBMS1 Loxodonta africana ENSLAFG00000017217 I 0.978
A6ML07_CALJA Callithrix jacchus ENSCJAG00000014861 I 0.970
RBMS1 Cavia porcellus ENSCPOG00000012310 I 0.970
RBMS1 Gorilla gorilla ENSGGOG00000001264 I 0.970
RBMS1 Homo sapiens ENSG00000153250 D 0.970
RBMS1 Pan troglodytes ENSPTRG00000012573 I 0.970
RBMS1 Monodelphis domestica ENSMODG00000005250 I 0.970
RBMS1 Anolis carolinensis ENSACAG00000011984 I 0.963
RBMS1 Ornithorhynchus anatinus ENSOANG00000006166 I 0.963
ENSPPYG00000012879 Pongo pygmaeus ENSPPYG00000012879 I 0.963
Rbms1 Rattus norvegicus ENSRNOG00000008482 I 0.963
RBMS1 Otolemur garnettii ENSOGAG00000002900 I 0.963
RBMS1 Equus caballus ENSECAG00000019894 I 0.963
RBMS1 Vicugna pacos ENSVPAG00000002716 I 0.963
RBMS1 Tupaia belangeri ENSTBEG00000016156 I 0.955
AAH43623 Xenopus laevis AAH43623 I 0.955
Rbms1 Mus musculus ENSMUSG00000026970 I 0.940
RBMS2 Callithrix jacchus ENSCJAG00000010803 I 0.918
ENSPPYG00000004665 Pongo pygmaeus ENSPPYG00000004665 I 0.918
RBMS2 Loxodonta africana ENSLAFG00000008251 I 0.918
RBMS1 Tetraodon nigroviridis ENSTNIG00000016496 I 0.918
RBMS2 Pan troglodytes ENSPTRG00000005104 I 0.918
RBMS2 Homo sapiens ENSG00000076067 I 0.918
RBMS2 Macaca mulatta ENSMMUG00000019330 I 0.918
RBMS2 Oryctolagus cuniculus ENSOCUG00000006073 I 0.910
Rbms2 Dipodomys ordii ENSDORG00000009231 I 0.910
RBMS2 Pteropus vampyrus ENSPVAG00000007616 I 0.910
RBMS2 Oryzias latipes ENSORLG00000015426 I 0.910
RBMS2_BOVIN Bos taurus ENSBTAG00000017830 I 0.910
RBMS2 Vicugna pacos ENSVPAG00000004022 I 0.910
rbms2 Xenopus tropicalis ENSXETG00000021787 I 0.910
RBMS2 Sus scrofa ENSSSCG00000000402 I 0.910
RBMS2 Canis familiaris ENSCAFG00000000134 I 0.910
ENSG00000213250 Homo sapiens ENSG00000213250 I 0.904
RBMS2 Danio rerio ENSDARG00000056150 I 0.903
RBMS2 Gasterosteus aculeatus ENSGACG00000000617 I 0.903
RBMS2 Cavia porcellus ENSCPOG00000008256 I 0.903
Rbms2 Mus musculus ENSMUSG00000040043 I 0.903
RBMS1 Danio rerio ENSDARG00000057768 I 0.902
Ame_R003849 Ailuropoda melanoleuca Ame_R003849 I 0.902
Rbms2 Rattus norvegicus ENSRNOG00000003076 I 0.896
RBMS2 Oryzias latipes ENSORLG00000007807 I 0.896
ENSGGOG00000028247 Gorilla gorilla ENSGGOG00000028247 I 0.896
RBMS2 Tetraodon nigroviridis ENSTNIG00000014563 I 0.889
RBMS2 Takifugu rubripes ENSTRUG00000008492 I 0.889
RBMS1 Oryzias latipes ENSORLG00000016818 I 0.888
RBMS2 Equus caballus ENSECAG00000013470 I 0.881
RBMS2 Anolis carolinensis ENSACAG00000016623 I 0.881
RBMS2 Tetraodon nigroviridis ENSTNIG00000015056 I 0.880
RBMS2 Macropus eugenii ENSMEUG00000015616 I 0.873
RBMS1 Takifugu rubripes ENSTRUG00000005466 I 0.873
rbms3 Danio rerio ENSDARG00000044574 I 0.873
RBMS2 Takifugu rubripes ENSTRUG00000006839 I 0.872
RBMS3 Gasterosteus aculeatus ENSGACG00000006377 I 0.867
RBMS3 Homo sapiens ENSG00000144642 D 0.866
RBMS3 Tetraodon nigroviridis ENSTNIG00000013818 I 0.866
RBMS3 Takifugu rubripes ENSTRUG00000009128 I 0.866
RBMS2 Gasterosteus aculeatus ENSGACG00000009332 I 0.866
RBMS1 Gasterosteus aculeatus ENSGACG00000005671 I 0.860
RBMS2 Tupaia belangeri ENSTBEG00000009515 I 0.860
RBMS3 Tetraodon nigroviridis ENSTNIG00000013819 I 0.860
RBMS3 Gasterosteus aculeatus ENSGACG00000003155 I 0.859
RBMS3 Gorilla gorilla ENSGGOG00000007228 I 0.858
RBMS3 Pan troglodytes ENSPTRG00000014709 I 0.858
RBMS3 Ochotona princeps ENSOPRG00000006808 I 0.858
RBMS3 Loxodonta africana ENSLAFG00000000354 I 0.858
RBMS3 Oryctolagus cuniculus ENSOCUG00000004840 I 0.858
RBMS3 Ornithorhynchus anatinus ENSOANG00000010529 I 0.858
RBMS3 Macaca mulatta ENSMMUG00000004404 I 0.858
RBMS3 Monodelphis domestica ENSMODG00000015125 I 0.858
Rbms3 Mus musculus ENSMUSG00000039607 I 0.858
RBMS3 Sorex araneus ENSSARG00000000695 I 0.858
RBMS3 Cavia porcellus ENSCPOG00000006457 I 0.858
RBMS3 Callithrix jacchus ENSCJAG00000004312 I 0.858
RBMS3 Bos taurus ENSBTAG00000044062 I 0.858
RBMS3 Tupaia belangeri ENSTBEG00000005362 I 0.858
RBMS3 Gallus gallus ENSGALG00000011439 I 0.858
rbms1a Danio rerio ENSDARG00000074023 I 0.852
RBMS3 Oryzias latipes ENSORLG00000005370 I 0.851
RBMS3 Tursiops truncatus ENSTTRG00000006202 I 0.851
RBMS1 Echinops telfairi ENSETEG00000012135 I 0.827
RBMS1 Ochotona princeps ENSOPRG00000012431 I 0.827
RBMS1 Sorex araneus ENSSARG00000011085 I 0.827
RBMS1 Microcebus murinus ENSMICG00000008325 I 0.820
RBMS3 Vicugna pacos ENSVPAG00000003842 I 0.815
RBMS3 Sus scrofa ENSSSCG00000011222 I 0.813
RBMS2 Tursiops truncatus ENSTTRG00000002117 I 0.806
RBMS1 Takifugu rubripes ENSTRUG00000017155 I 0.806
RBMS1 Tetraodon nigroviridis ENSTNIG00000009477 I 0.799
RBMS3 Myotis lucifugus ENSMLUG00000000659 I 0.799
RBMS1 Gasterosteus aculeatus ENSGACG00000015174 I 0.799
D4A288_RAT Rattus norvegicus ENSRNOG00000023845 I 0.796
RBMS1 Oryzias latipes ENSORLG00000003917 I 0.793
rbms1 Xenopus tropicalis ENSXETG00000016204 I 0.785
RBMS2 Felis catus ENSFCAG00000012028 I 0.782
ENSGGOG00000011570 Gorilla gorilla ENSGGOG00000011570 I 0.778
RBMS3 Pteropus vampyrus ENSPVAG00000014037 I 0.776
RBMS2 Dasypus novemcinctus ENSDNOG00000011198 I 0.754
RBMS2 Myotis lucifugus ENSMLUG00000000530 I 0.746
RBMS2 Sorex araneus ENSSARG00000012553 I 0.746
RBMS2 Choloepus hoffmanni ENSCHOG00000007372 I 0.731
RBMS3 Macropus eugenii ENSMEUG00000004772 I 0.729
RBMS3 Dasypus novemcinctus ENSDNOG00000016645 I 0.729
RBMS3 Choloepus hoffmanni ENSCHOG00000000758 I 0.724
RBMS2 Procavia capensis ENSPCAG00000010311 I 0.724
RBMS2 Otolemur garnettii ENSOGAG00000003534 I 0.722
RBMS2 Echinops telfairi ENSETEG00000010200 I 0.716
RBMS2 Danio rerio ENSDARG00000044179 I 0.711
RBMS3 Erinaceus europaeus ENSEEUG00000014337 I 0.709
RBMS3 Echinops telfairi ENSETEG00000009485 I 0.701