RBMS2 (Cavia porcellus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCPOG00000008256 T35805_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBMS1
M143_0.6 		Homo sapiens KAUAUAS RNAcompete
Ray et al.(2013)
RNCMPT00152 		0.904
RBMS3
M164_0.6 		Homo sapiens HAUAUA RNAcompete
Ray et al.(2013)
RNCMPT00173 		0.866
RBMS3
M055_0.6 		Homo sapiens MUAUAKM RNAcompete
Ray et al.(2013)
RNCMPT00057 		0.866
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000007422 RRM 58 124
ENSCPOP00000007422 RRM 137 203

Links

Other RRM family RBPs
Other Cavia porcellus RBPs

123 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
RBMS2 Homo sapiens ENSG00000076067 I 0.985
RBMS2 Pan troglodytes ENSPTRG00000005104 I 0.985
ENSPPYG00000004665 Pongo pygmaeus ENSPPYG00000004665 I 0.985
RBMS2 Loxodonta africana ENSLAFG00000008251 I 0.985
RBMS2 Callithrix jacchus ENSCJAG00000010803 I 0.985
RBMS2 Macaca mulatta ENSMMUG00000019330 I 0.985
RBMS2 Pteropus vampyrus ENSPVAG00000007616 I 0.978
Rbms2 Dipodomys ordii ENSDORG00000009231 I 0.978
RBMS2 Vicugna pacos ENSVPAG00000004022 I 0.978
RBMS2 Oryctolagus cuniculus ENSOCUG00000006073 I 0.978
RBMS2 Sus scrofa ENSSSCG00000000402 I 0.978
ENSG00000213250 Homo sapiens ENSG00000213250 I 0.970
RBMS2_BOVIN Bos taurus ENSBTAG00000017830 I 0.970
Rbms2 Mus musculus ENSMUSG00000040043 I 0.970
Rbms2 Rattus norvegicus ENSRNOG00000003076 I 0.963
RBMS2 Canis familiaris ENSCAFG00000000134 I 0.963
Ame_R003849 Ailuropoda melanoleuca Ame_R003849 I 0.963
ENSGGOG00000028247 Gorilla gorilla ENSGGOG00000028247 I 0.963
RBMS2 Equus caballus ENSECAG00000013470 I 0.948
RBMS2 Danio rerio ENSDARG00000056150 I 0.940
RBMS2 Macropus eugenii ENSMEUG00000015616 I 0.940
RBMS2 Oryzias latipes ENSORLG00000015426 I 0.933
RBMS2 Gasterosteus aculeatus ENSGACG00000000617 I 0.925
RBMS2 Anolis carolinensis ENSACAG00000016623 I 0.919
RBMS1 Pan troglodytes ENSPTRG00000012573 I 0.918
RBMS1 Pteropus vampyrus ENSPVAG00000010429 I 0.918
RBMS1 Oryctolagus cuniculus ENSOCUG00000017365 I 0.918
RBMS1 Procavia capensis ENSPCAG00000009673 I 0.918
Rbms1 Dipodomys ordii ENSDORG00000007103 I 0.918
RBMS1 Otolemur garnettii ENSOGAG00000002900 I 0.918
RBMS1 Sus scrofa ENSSSCG00000015888 I 0.918
rbms2 Xenopus tropicalis ENSXETG00000021787 I 0.918
Ame_R017740 Ailuropoda melanoleuca Ame_R017740 I 0.918
RBMS1 Tursiops truncatus ENSTTRG00000011058 I 0.918
RBMS1 Tarsius syrichta ENSTSYG00000005584 I 0.918
RBMS1_BOVIN Bos taurus ENSBTAG00000005180 I 0.918
RBMS1 Macaca mulatta ENSMMUG00000016825 I 0.918
RBMS1 Canis familiaris ENSCAFG00000009922 I 0.918
RBMS1 Loxodonta africana ENSLAFG00000017217 I 0.918
RBMS1 Homo sapiens ENSG00000153250 D 0.918
A6ML07_CALJA Callithrix jacchus ENSCJAG00000014861 I 0.918
RBMS1 Gorilla gorilla ENSGGOG00000001264 I 0.918
RBMS1 Anolis carolinensis ENSACAG00000011984 I 0.911
RBMS2 Takifugu rubripes ENSTRUG00000008492 I 0.911
RBMS1 Cavia porcellus ENSCPOG00000012310 I 0.910
RBMS1 Spermophilus tridecemlineatus ENSSTOG00000012501 I 0.910
ENSPPYG00000012879 Pongo pygmaeus ENSPPYG00000012879 I 0.910
RBMS1 Monodelphis domestica ENSMODG00000005250 I 0.910
RBMS2 Gasterosteus aculeatus ENSGACG00000009332 I 0.910
RBMS2 Tupaia belangeri ENSTBEG00000009515 I 0.904
RBMS1 Ornithorhynchus anatinus ENSOANG00000006166 I 0.904
RBMS2 Tetraodon nigroviridis ENSTNIG00000014563 I 0.904
RBMS1 Vicugna pacos ENSVPAG00000002716 I 0.903
Rbms1 Rattus norvegicus ENSRNOG00000008482 I 0.903
O73664_CHICK Gallus gallus ENSGALG00000011132 I 0.903
RBMS1 Equus caballus ENSECAG00000019894 I 0.903
RBMS1 Taeniopygia guttata ENSTGUG00000006606 I 0.903
RBMS1 Meleagris gallopavo ENSMGAG00000011054 I 0.903
RBMS2 Tetraodon nigroviridis ENSTNIG00000015056 I 0.903
RBMS1 Tupaia belangeri ENSTBEG00000016156 I 0.896
AAH43623 Xenopus laevis AAH43623 I 0.896
RBMS2 Takifugu rubripes ENSTRUG00000006839 I 0.896
RBMS2 Oryzias latipes ENSORLG00000007807 I 0.896
RBMS1 Danio rerio ENSDARG00000057768 I 0.881
Rbms1 Mus musculus ENSMUSG00000026970 I 0.881
RBMS1 Tetraodon nigroviridis ENSTNIG00000016496 I 0.874
RBMS3 Homo sapiens ENSG00000144642 D 0.866
RBMS3 Takifugu rubripes ENSTRUG00000009128 I 0.858
RBMS3 Sorex araneus ENSSARG00000000695 I 0.858
RBMS2 Tursiops truncatus ENSTTRG00000002117 I 0.858
RBMS3 Tursiops truncatus ENSTTRG00000006202 I 0.858
RBMS3 Gorilla gorilla ENSGGOG00000007228 I 0.858
RBMS3 Tetraodon nigroviridis ENSTNIG00000013818 I 0.858
RBMS3 Gallus gallus ENSGALG00000011439 I 0.858
RBMS3 Tupaia belangeri ENSTBEG00000005362 I 0.858
RBMS3 Bos taurus ENSBTAG00000044062 I 0.858
rbms3 Danio rerio ENSDARG00000044574 I 0.858
RBMS3 Oryctolagus cuniculus ENSOCUG00000004840 I 0.858
RBMS3 Callithrix jacchus ENSCJAG00000004312 I 0.858
RBMS3 Ornithorhynchus anatinus ENSOANG00000010529 I 0.858
Rbms3 Mus musculus ENSMUSG00000039607 I 0.858
RBMS3 Macaca mulatta ENSMMUG00000004404 I 0.858
RBMS3 Monodelphis domestica ENSMODG00000015125 I 0.858
RBMS3 Cavia porcellus ENSCPOG00000006457 I 0.858
RBMS3 Ochotona princeps ENSOPRG00000006808 I 0.858
RBMS3 Pan troglodytes ENSPTRG00000014709 I 0.858
RBMS3 Loxodonta africana ENSLAFG00000000354 I 0.858
D4A288_RAT Rattus norvegicus ENSRNOG00000023845 I 0.854
RBMS3 Gasterosteus aculeatus ENSGACG00000003155 I 0.852
RBMS3 Gasterosteus aculeatus ENSGACG00000006377 I 0.852
RBMS1 Takifugu rubripes ENSTRUG00000005466 I 0.852
RBMS3 Tetraodon nigroviridis ENSTNIG00000013819 I 0.846
rbms1a Danio rerio ENSDARG00000074023 I 0.844
RBMS3 Oryzias latipes ENSORLG00000005370 I 0.843
RBMS1 Oryzias latipes ENSORLG00000016818 I 0.837
RBMS1 Gasterosteus aculeatus ENSGACG00000005671 I 0.831
RBMS3 Vicugna pacos ENSVPAG00000003842 I 0.822
ENSGGOG00000011570 Gorilla gorilla ENSGGOG00000011570 I 0.816
RBMS3 Sus scrofa ENSSSCG00000011222 I 0.813
RBMS2 Felis catus ENSFCAG00000012028 I 0.813
RBMS2 Myotis lucifugus ENSMLUG00000000530 I 0.813
RBMS3 Myotis lucifugus ENSMLUG00000000659 I 0.799
RBMS2 Sorex araneus ENSSARG00000012553 I 0.785
RBMS2 Dasypus novemcinctus ENSDNOG00000011198 I 0.785
RBMS1 Microcebus murinus ENSMICG00000008325 I 0.784
RBMS1 Echinops telfairi ENSETEG00000012135 I 0.776
RBMS2 Choloepus hoffmanni ENSCHOG00000007372 I 0.776
RBMS1 Sorex araneus ENSSARG00000011085 I 0.776
RBMS2 Procavia capensis ENSPCAG00000010311 I 0.776
RBMS1 Ochotona princeps ENSOPRG00000012431 I 0.776
RBMS3 Pteropus vampyrus ENSPVAG00000014037 I 0.769
RBMS1 Gasterosteus aculeatus ENSGACG00000015174 I 0.756
RBMS1 Takifugu rubripes ENSTRUG00000017155 I 0.756
RBMS1 Oryzias latipes ENSORLG00000003917 I 0.756
RBMS2 Echinops telfairi ENSETEG00000010200 I 0.754
rbms1 Xenopus tropicalis ENSXETG00000016204 I 0.748
RBMS1 Tetraodon nigroviridis ENSTNIG00000009477 I 0.748
RBMS2 Otolemur garnettii ENSOGAG00000003534 I 0.746
RBMS2 Danio rerio ENSDARG00000044179 I 0.733
RBMS3 Macropus eugenii ENSMEUG00000004772 I 0.724
RBMS3 Dasypus novemcinctus ENSDNOG00000016645 I 0.724
RBMS3 Choloepus hoffmanni ENSCHOG00000000758 I 0.716
RBMS3 Erinaceus europaeus ENSEEUG00000014337 I 0.716