DDB_G0285973 (Dictyostelium discoideum)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 DDB_G0285973 T02212_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZFP36
M266_0.6 		Homo sapiens Sequence logo not available UUGUGS RIP-chip
Cook et al.(2011)
193_18367721.3 		0.722
ZFP36
M265_0.6 		Homo sapiens Sequence logo not available CUUGU RIP-chip
Cook et al.(2011)
193_18367721.2 		0.722
ZFP36
M264_0.6 		Homo sapiens Sequence logo not available HCYUBY RIP-chip
Cook et al.(2011)
193_18367721.1 		0.722
ZFP36
M263_0.6 		Homo sapiens Sequence logo not available AAUAA RIP-chip
Cook et al.(2011)
193_18367721 		0.722
ZFP36
M350_0.6 		Homo sapiens UUAUUUAWW SELEX
Cook et al.(2011)
951_12324455 		0.722
ZFP36
M269_0.6 		Homo sapiens UUAUUUAWW SELEX
Cook et al.(2011)
221_12324455 		0.722
ZFP36
M268_0.6 		Homo sapiens Sequence logo not available AUUUA RIP-chip
Cook et al.(2011)
194_18256032.1 		0.722
ZFP36
M267_0.6 		Homo sapiens Sequence logo not available UUAUUUAUU RIP-chip
Cook et al.(2011)
194_18256032 		0.722
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
DDB0218764 CCCH ZF 196 222
DDB0218764 CCCH ZF 234 260

Links

Other CCCH ZF family RBPs
Other Dictyostelium discoideum RBPs

140 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL002272 Aedes aegypti AAEL002272 N 0.000
amel4_ncbi_hmm4222 Apis mellifera amel4_ncbi_hmm4222 I 0.000
BGIBMGA011690 Bombyx mori BGIBMGA011690 N 0.000
CPIJ007352 Culex quinquefasciatus CPIJ007352 N 0.000
CpipJ_CPIJ007352 Culex pipiens CpipJ_CPIJ007352 N 0.000
ENSPPYG00000005933 Pongo pygmaeus ENSPPYG00000005933 I 0.704
ZFP36L1 Tursiops truncatus ENSTTRG00000003475 I 0.704
nasonia_NCBI_hmm460384 Nasonia vitripennis nasonia_NCBI_hmm460384 I 0.000
PHUM305930 Pediculus humanus PHUM305930 I 0.000