GJ15820 (Drosophila virilis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 FBgn0203007 T19987_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0230237 KH 162 212

Links

Other KH family RBPs
Other Drosophila virilis RBPs

136 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
28525.m000262 Ricinus communis 28525.m000262 N 0.725
AAEL011832 Aedes aegypti AAEL011832 N 0.784
AAH42279 Xenopus laevis AAH42279 N 0.824
AAQ24169 Xenopus laevis AAQ24169 N 0.824
AGAP004145 Anopheles gambiae AGAP004145 N 0.745
amel4_ncbi_hmm14037 Apis mellifera amel4_ncbi_hmm14037 N 0.922
Ame_R013855 Ailuropoda melanoleuca Ame_R013855 N 0.784
BGIBMGA014064 Bombyx mori BGIBMGA014064 N 0.922
Bm1_42995 Brugia malayi Bm1_42995 N 0.784
cassava30594.valid.m1 Manihot esculenta cassava30594.valid.m1 N 0.725
cassava7030.valid.m1 Manihot esculenta cassava7030.valid.m1 N 0.706
CBG01042 Caenorhabditis briggsae CBG01042 N 0.706
CBN06104 Caenorhabditis brenneri CBN06104 N 0.706
Chlre2_kg.scaffold_20000177 Chlamydomonas reinhardtii Chlre2_kg.scaffold_20000177 N 0.725
CJA15618 Caenorhabditis japonica CJA15618 N 0.725
CPIJ015853 Culex quinquefasciatus CPIJ015853 N 0.824
CPIJ019677 Culex quinquefasciatus CPIJ019677 N 0.824
CpipJ_CPIJ015853 Culex pipiens CpipJ_CPIJ015853 N 0.824
CpipJ_CPIJ019677 Culex pipiens CpipJ_CPIJ019677 N 0.824
CRE05188 Caenorhabditis remanei CRE05188 N 0.706
pno1 Dictyostelium discoideum DDB_G0287557 N 0.765
DGIL_AUG5s4501g8t1 Acyrtosiphon pisum DGIL_AUG5s4501g8t1 N 0.882
EFA79428.1 Polysphondylium pallidum EFA79428.1 N 0.745
PNO1 Anolis carolinensis ENSACAG00000001218 N 0.804
PNO1_BOVIN Bos taurus ENSBTAG00000010604 N 0.784
PNO1 Canis familiaris ENSCAFG00000003256 N 0.784
ENSCING00000009577 Ciona intestinalis ENSCING00000009577 N 0.843
LOC100389955 Callithrix jacchus ENSCJAG00000006564 N 0.784
ENSCJAG00000022611 Callithrix jacchus ENSCJAG00000022611 N 0.745
PNO1 Cavia porcellus ENSCPOG00000010130 N 0.784
ENSCSAVG00000001303 Ciona savignyi ENSCSAVG00000001303 N 0.843
pno1 Danio rerio ENSDARG00000008502 N 0.824
Pno1 Dipodomys ordii ENSDORG00000006867 N 0.784
LOC100061904 Equus caballus ENSECAG00000011263 N 0.784
PNO1 Erinaceus europaeus ENSEEUG00000009611 N 0.784
PNO1 Homo sapiens ENSG00000115946 N 0.784
PNO1 Gasterosteus aculeatus ENSGACG00000012047 N 0.784
PNO1_CHICK Gallus gallus ENSGALG00000009093 N 0.824
PNO1 Gorilla gorilla ENSGGOG00000009158 N 0.784
PNO1 Loxodonta africana ENSLAFG00000000046 N 0.784
PNO1 Macropus eugenii ENSMEUG00000004504 N 0.784
PNO1 Meleagris gallopavo ENSMGAG00000004514 N 0.824
PNO1 Microcebus murinus ENSMICG00000010897 N 0.784
PNO1 Myotis lucifugus ENSMLUG00000010850 N 0.784
XM_001110046.1 Macaca mulatta ENSMMUG00000003556 N 0.745
Q7YRC8_MACMU Macaca mulatta ENSMMUG00000017461 N 0.784
XM_001095777.1 Macaca mulatta ENSMMUG00000030357 N 0.784
PNO1 Monodelphis domestica ENSMODG00000003567 N 0.784
Pno1 Mus musculus ENSMUSG00000020116 N 0.765
PNO1 Ornithorhynchus anatinus ENSOANG00000008388 N 0.784
ENSOCUG00000006100 Oryctolagus cuniculus ENSOCUG00000006100 N 0.784
ENSOCUG00000022236 Oryctolagus cuniculus ENSOCUG00000022236 N 0.784
PNO1 Ochotona princeps ENSOPRG00000009643 N 0.784
Q6VBQ6_ORYLA Oryzias latipes ENSORLG00000002371 N 0.824
PNO1 Procavia capensis ENSPCAG00000016146 N 0.784
ENSPPYG00000012353 Pongo pygmaeus ENSPPYG00000012353 N 0.784
PNO1 Pan troglodytes ENSPTRG00000011999 N 0.784
PNO1 Pteropus vampyrus ENSPVAG00000012695 N 0.784
Pno1 Rattus norvegicus ENSRNOG00000005524 N 0.784
PNO1 Sus scrofa ENSSSCG00000008352 N 0.784
PNO1 Taeniopygia guttata ENSTGUG00000002369 N 0.804
PNO1 Tetraodon nigroviridis ENSTNIG00000009825 N 0.804
PNO1 Takifugu rubripes ENSTRUG00000012470 N 0.804
PNO1 Tursiops truncatus ENSTTRG00000014002 N 0.784
PNO1 Vicugna pacos ENSVPAG00000012083 N 0.784
pno1 Xenopus tropicalis ENSXETG00000017349 N 0.824
estExt_fgenesh1_pg.C_110137 Monosiga brevicollis estExt_fgenesh1_pg.C_110137 N 0.765
estExt_fgenesh2_kg.C_20130 Agaricus bisporus estExt_fgenesh2_kg.C_20130 N 0.706
estExt_fgenesh2_pm.C_sca_70005 Lottia gigantea estExt_fgenesh2_pm.C_sca_70005 N 0.725
estExt_fgeneshHS_pm.C_280002 Naegleria gruberi estExt_fgeneshHS_pm.C_280002 N 0.706
estExt_Genewise1.C_260084 Melampsora laricis populina estExt_Genewise1.C_260084 N 0.706
estExt_Genewise1.C_5820041 Capitella teleta estExt_Genewise1.C_5820041 N 0.765
estExt_Genewise1Plus.C_10658 Mucor circinelloides estExt_Genewise1Plus.C_10658 N 0.706
estExt_Genewise1Plus.C_250095 Phycomyces blakesleeanus estExt_Genewise1Plus.C_250095 N 0.706
estExt_Genewise1Plus.C_600117 Volvox carteri estExt_Genewise1Plus.C_600117 N 0.725
e_gw1.12.287.1 Serpula lacrymans e_gw1.12.287.1 N 0.706
e_gw1.2.756.1 Heterobasidion annosum e_gw1.2.756.1 N 0.706
e_gw1.7.528.1 Ostreococcus RCC809 e_gw1.7.528.1 N 0.706
e_gwEuk.7.409.1 Ostreococcus lucimarinus e_gwEuk.7.409.1 N 0.706
e_gwh1.2.512.1 Laccaria bicolor e_gwh1.2.512.1 N 0.706
e_gww2.1.865.1 Phanerochaete chrysosporium e_gww2.1.865.1 N 0.725
l(1)G0004 Drosophila melanogaster FBgn0027334 N 0.980
GE17874 Drosophila yakuba FBgn0068478 N 0.980
GA11169-RA Drosophila pseudoobscura FBgn0071224 N 1.000
GF20246 Drosophila ananassae FBgn0097253 N 0.980
GG19285 Drosophila erecta FBgn0111489 N 0.980
GH12628 Drosophila grimshawi FBgn0120107 N 1.000
GI11042 Drosophila mojavensis FBgn0133805 N 0.980
GM23025 Drosophila sechellia FBgn0177893 N 0.980
GD17488 Drosophila simulans FBgn0189040 N 0.980
GK20148 Drosophila willistoni FBgn0222145 N 0.980
fgenesh1_pg.C_scaffold_107000027 Daphnia pulex fgenesh1_pg.C_scaffold_107000027 N 0.882
fgenesh1_pg.scaffold_18000119 Nematostella vectensis fgenesh1_pg.scaffold_18000119 N 0.804
fgenesh2_pg.scaffold_196000015 Branchiostoma floridae fgenesh2_pg.scaffold_196000015 N 0.804
fgenesh2_pm.scaffold_78000001 Branchiostoma floridae fgenesh2_pm.scaffold_78000001 N 0.804
fgenesh3_pm.54__15 Postia placenta fgenesh3_pm.54__15 N 0.725
fgeneshCV_pg.C_scaffold_11000142 Chlorella vulgaris fgeneshCV_pg.C_scaffold_11000142 N 0.784
fgeneshTA2_pg.C_scaffold_14000176 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_14000176 N 0.804
Genemark1.5719_g Coccomyxa C 169 Genemark1.5719_g N 0.784
GID1.0042265 Dictyostelium purpureum GID1.0042265 N 0.765
GLRG_03940 Colletotrichum graminicola GLRG_03940 N 0.712
GP3.070330 Batrachochytrium dendrobatidis GP3.070330 N 0.706
GSTUMT00003923001 Tuber melanosporum GSTUMT00003923001 N 0.706
gw1.1.2472.1 Pleurotus ostreatus gw1.1.2472.1 N 0.706
PNO1_IXOSC Ixodes scapularis ISCW023560 N 0.824
LjSGA_017760.2 Lotus japonicus LjSGA_017760.2 N 0.706
LOAG_05624 Loa loa LOAG_05624 N 0.784
MDP0000120063 Malus x domestica MDP0000120063 N 0.706
MDP0000136407 Malus x domestica MDP0000136407 N 0.706
MDP0000265633 Malus x domestica MDP0000265633 N 0.706
MDP0000754021 Malus x domestica MDP0000754021 N 0.706
Medtr3g080390 Medicago truncatula Medtr3g080390 N 0.706
mgf006621m Mimulus guttatus mgf006621m N 0.706
nasonia_NCBI_hmm120183 Nasonia vitripennis nasonia_NCBI_hmm120183 N 0.902
PGUG_02960 Candida guilliermondii PGUG_02960 N 0.706
PHUM356890 Pediculus humanus PHUM356890 N 0.863
PK08146.1 Cannabis sativa PK08146.1 N 0.706
B9GHH7_POPTR Populus trichocarpa POPTR_0001s47320 N 0.725
B9N5M8_POPTR Populus trichocarpa POPTR_0011s16880 N 0.725
ppa009897m Prunus persica ppa009897m N 0.706
ppa011086m Prunus persica ppa011086m N 0.706
PPA25260 Pristionchus pacificus PPA25260 N 0.725
PTSG_04415 Salpingoeca rosetta PTSG_04415 N 0.706
Q8AVH4 Xenopus laevis Q8AVH4 N 0.824
RO3G_00885 Rhizopus oryzae RO3G_00885 N 0.725
RO3G_05288 Rhizopus oryzae RO3G_05288 N 0.725
SNAPOd2T00014997001 Oikopleura dioica SNAPOd2T00014997001 N 0.745
SNAPOd2T00029081001 Oikopleura dioica SNAPOd2T00029081001 N 0.745
SPRG_02415 Saprolegnia parasitica SPRG_02415 N 0.706
WUBG_12774 Wuchereria bancrofti WUBG_12774 N 0.784
XP_001202155.1 Strongylocentrotus purpuratus XP_001202155.1 N 0.824
XP_001202160.1 Strongylocentrotus purpuratus XP_001202160.1 N 0.824
XP_002162789.1 Hydra magnipapillata XP_002162789.1 N 0.843
XP_791733.2 Strongylocentrotus purpuratus XP_791733.2 N 0.824
XP_798188.2 Strongylocentrotus purpuratus XP_798188.2 N 0.824
Y53C12B.2 Caenorhabditis elegans Y53C12B.2 N 0.706