CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AO090001000554
(
Aspergillus oryzae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADAORAG00000508
T33658_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADAORAP00000497
RRM
76
155
VYVIGLNPTIRDESQLLQTLRGRDYFGQYGEIEKIVVSKAKPGGNPNQGIGVYVTYSKKSDAATCISSVDGSVNGDRVLR
Links
Other
RRM
family RBPs
Other
Aspergillus oryzae
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSCING00000004873
Ciona intestinalis
ENSCING00000004873
I
0.000
ENSCING00000012370
Ciona intestinalis
ENSCING00000012370
I
0.000
ENSCSAVG00000002581
Ciona savignyi
ENSCSAVG00000002581
I
0.000