LOC100067495 (Equus caballus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSECAG00000014429 T36634_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPH2
M151_0.6 		Homo sapiens GGGAGGG RNAcompete
Ray et al.(2013)
RNCMPT00160 		0.857
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000012462 RRM 8 55
ENSECAP00000012462 RRM 84 153
ENSECAP00000012462 RRM 262 329

Links

Other RRM family RBPs
Other Equus caballus RBPs

89 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os01g19100 Oryza sativa LOC_Os01g19100 N 0.000
LOC_Os01g25679 Oryza sativa LOC_Os01g25679 N 0.000
LOC_Os02g04940 Oryza sativa LOC_Os02g04940 N 0.000
LOC_Os02g34450 Oryza sativa LOC_Os02g34450 N 0.000
LOC_Os02g44180 Oryza sativa LOC_Os02g44180 N 0.000
LOC_Os03g44360 Oryza sativa LOC_Os03g44360 N 0.000
LOC_Os03g59810 Oryza sativa LOC_Os03g59810 N 0.000
LOC_Os04g05730 Oryza sativa LOC_Os04g05730 N 0.000
LOC_Os04g07510 Oryza sativa LOC_Os04g07510 N 0.000
LOC_Os04g11310 Oryza sativa LOC_Os04g11310 N 0.000
LOC_Os04g18750 Oryza sativa LOC_Os04g18750 N 0.000
LOC_Os04g43950 Oryza sativa LOC_Os04g43950 N 0.000
LOC_Os06g24960 Oryza sativa LOC_Os06g24960 N 0.000
LOC_Os06g31350 Oryza sativa LOC_Os06g31350 N 0.000
LOC_Os07g15080 Oryza sativa LOC_Os07g15080 N 0.000
LOC_Os07g16000 Oryza sativa LOC_Os07g16000 N 0.000
LOC_Os07g17090 Oryza sativa LOC_Os07g17090 N 0.000
LOC_Os07g20330 Oryza sativa LOC_Os07g20330 N 0.000
LOC_Os07g26220 Oryza sativa LOC_Os07g26220 N 0.000
LOC_Os07g30430 Oryza sativa LOC_Os07g30430 N 0.000
LOC_Os08g23510 Oryza sativa LOC_Os08g23510 N 0.000
LOC_Os09g08750 Oryza sativa LOC_Os09g08750 N 0.000
LOC_Os10g06430 Oryza sativa LOC_Os10g06430 N 0.000
LOC_Os10g28930 Oryza sativa LOC_Os10g28930 N 0.000
LOC_Os11g03250 Oryza sativa LOC_Os11g03250 N 0.000
LOC_Os11g18620 Oryza sativa LOC_Os11g18620 N 0.000
LOC_Os11g19910 Oryza sativa LOC_Os11g19910 N 0.000
LOC_Os11g21830 Oryza sativa LOC_Os11g21830 N 0.000
LOC_Os11g23244 Oryza sativa LOC_Os11g23244 N 0.000
LOC_Os11g24000 Oryza sativa LOC_Os11g24000 N 0.000
LOC_Os11g27050 Oryza sativa LOC_Os11g27050 N 0.000
LOC_Os11g30860 Oryza sativa LOC_Os11g30860 N 0.000
LOC_Os11g38820 Oryza sativa LOC_Os11g38820 N 0.000
LOC_Os11g39950 Oryza sativa LOC_Os11g39950 N 0.000
LOC_Os12g18320 Oryza sativa LOC_Os12g18320 N 0.000
LOC_Os12g23060 Oryza sativa LOC_Os12g23060 N 0.000
LOC_Os12g26790 Oryza sativa LOC_Os12g26790 N 0.000
LOC_Os12g28690 Oryza sativa LOC_Os12g28690 N 0.000
LOC_Os12g33260 Oryza sativa LOC_Os12g33260 N 0.000
LOC_Os12g43179 Oryza sativa LOC_Os12g43179 N 0.000
XP_001180278.1 Strongylocentrotus purpuratus XP_001180278.1 N 0.000
XP_001200167.1 Strongylocentrotus purpuratus XP_001200167.1 N 0.000