Q5F3I8_CHICK (Gallus gallus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSGALG00000005955 T37649_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPH2
M151_0.6 		Homo sapiens GGGAGGG RNAcompete
Ray et al.(2013)
RNCMPT00160 		0.948
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000009561 RRM 43 114
ENSGALP00000009561 RRM 143 212
ENSGALP00000009561 RRM 314 381
ENSGALP00000033631 RRM 63 134
ENSGALP00000033631 RRM 163 232
ENSGALP00000033631 RRM 341 408
ENSGALP00000033632 RRM 43 114
ENSGALP00000033632 RRM 143 212
ENSGALP00000033632 RRM 321 388
ENSGALP00000039530 RRM 63 134
ENSGALP00000039530 RRM 163 232
ENSGALP00000039530 RRM 343 410

Links

Other RRM family RBPs
Other Gallus gallus RBPs

96 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH70969 Xenopus laevis AAH70969 I 0.881
AAH77770 Xenopus laevis AAH77770 I 0.910
AAI10708 Xenopus laevis AAI10708 I 0.910
Ame_R005224 Ailuropoda melanoleuca Ame_R005224 I 0.867
Ame_R009346 Ailuropoda melanoleuca Ame_R009346 I 0.967
Ame_R018226 Ailuropoda melanoleuca Ame_R018226 I 0.943
ENSACAG00000016323 Anolis carolinensis ENSACAG00000016323 I 0.929
HNRH2_BOVIN Bos taurus ENSBTAG00000007499 I 0.943
HNRPF_BOVIN Bos taurus ENSBTAG00000008853 I 0.862
HNRNPH1 Bos taurus ENSBTAG00000009389 I 0.967
HNRNPH1 Canis familiaris ENSCAFG00000000336 I 0.967
HNRNPF Canis familiaris ENSCAFG00000007044 I 0.867
HNRNPH2 Canis familiaris ENSCAFG00000017693 I 0.943
ENSCHOG00000003841 Choloepus hoffmanni ENSCHOG00000003841 I 0.862
HNRNPH2 Callithrix jacchus ENSCJAG00000004908 I 0.948
ENSCJAG00000008291 Callithrix jacchus ENSCJAG00000008291 I 0.700
HNRNPH1 Callithrix jacchus ENSCJAG00000009931 I 0.967
HNRNPF Callithrix jacchus ENSCJAG00000016238 I 0.867
HNRNPH1 Cavia porcellus ENSCPOG00000001485 I 0.967
HNRNPF Cavia porcellus ENSCPOG00000003678 I 0.862
HNRNPH2 Cavia porcellus ENSCPOG00000012405 I 0.943
hnrnph1l Danio rerio ENSDARG00000005551 I 0.905
HNRNPH3 Danio rerio ENSDARG00000039466 I 0.757
ENSDORG00000005431 Dipodomys ordii ENSDORG00000005431 I 0.862
Hnrnph1 Dipodomys ordii ENSDORG00000005453 I 0.967
LOC100050002 Equus caballus ENSECAG00000003229 I 0.867
LOC100067495 Equus caballus ENSECAG00000014429 I 0.862
LOC100057665 Equus caballus ENSECAG00000023575 I 0.943
HNRNPH2 Echinops telfairi ENSETEG00000008416 I 0.943
HNRNPH1 Echinops telfairi ENSETEG00000011303 I 0.948
HNRNPH1 Felis catus ENSFCAG00000001204 I 0.833
HNRNPF Felis catus ENSFCAG00000006794 N 0.700
HNRNPH2 Felis catus ENSFCAG00000015400 I 0.890
HNRNPH2 Homo sapiens ENSG00000126945 D 0.948
HNRNPH1 Homo sapiens ENSG00000169045 I 0.967
HNRNPF Homo sapiens ENSG00000169813 I 0.862
HNRNPH3 Gasterosteus aculeatus ENSGACG00000016118 I 0.762
HNRNPH1 Gasterosteus aculeatus ENSGACG00000018352 I 0.895
HNRNPH2 Gorilla gorilla ENSGGOG00000008096 I 0.948
HNRNPF Gorilla gorilla ENSGGOG00000010867 I 0.862
HNRNPH1 Gorilla gorilla ENSGGOG00000025844 I 0.967
HNRNPF Loxodonta africana ENSLAFG00000000424 I 0.862
HNRNPH1 Loxodonta africana ENSLAFG00000015766 I 0.976
ENSMGAG00000007328 Meleagris gallopavo ENSMGAG00000007328 I 1.000
HNRNPF Microcebus murinus ENSMICG00000001490 I 0.862
ENSMICG00000014218 Microcebus murinus ENSMICG00000014218 I 0.838
HNRNPF Myotis lucifugus ENSMLUG00000007261 I 0.743
ENSMMUG00000017392 Macaca mulatta ENSMMUG00000017392 I 0.786
HNRNPH2 Macaca mulatta ENSMMUG00000019580 I 0.948
HNRNPF Macaca mulatta ENSMMUG00000020982 I 0.862
ENSMODG00000009436 Monodelphis domestica ENSMODG00000009436 I 0.962
Hnrnph1 Mus musculus ENSMUSG00000007850 I 0.967
Hnrnpf Mus musculus ENSMUSG00000042079 I 0.867
Hnrnph2 Mus musculus ENSMUSG00000045427 I 0.943
ENSOANG00000010222 Ornithorhynchus anatinus ENSOANG00000010222 I 0.962
ENSOCUG00000006387 Oryctolagus cuniculus ENSOCUG00000006387 I 0.943
ENSOCUG00000010629 Oryctolagus cuniculus ENSOCUG00000010629 I 0.943
HNRNPH1 Oryctolagus cuniculus ENSOCUG00000017150 I 0.967
ENSOCUG00000024604 Oryctolagus cuniculus ENSOCUG00000024604 I 0.819
ENSOCUG00000024719 Oryctolagus cuniculus ENSOCUG00000024719 I 0.867
HNRNPH1 Otolemur garnettii ENSOGAG00000012631 I 0.857
HNRNPF Otolemur garnettii ENSOGAG00000013734 I 0.862
HNRNPH2 Ochotona princeps ENSOPRG00000007985 I 0.943
HNRNPH1 Oryzias latipes ENSORLG00000006932 I 0.881
HNRNPH3 Oryzias latipes ENSORLG00000010499 I 0.757
HNRNPH2 Procavia capensis ENSPCAG00000003333 I 0.943
HNRNPF Procavia capensis ENSPCAG00000013169 I 0.862
ENSPPYG00000002212 Pongo pygmaeus ENSPPYG00000002212 I 0.862
ENSPPYG00000016121 Pongo pygmaeus ENSPPYG00000016121 I 0.967
ENSPPYG00000020553 Pongo pygmaeus ENSPPYG00000020553 I 0.948
HNRNPF Pan troglodytes ENSPTRG00000002446 I 0.862
HNRNPH1 Pan troglodytes ENSPTRG00000017617 I 0.967
HNRNPH2 Pan troglodytes ENSPTRG00000022107 I 0.948
HNRNPH2 Pteropus vampyrus ENSPVAG00000001571 I 0.943
HNRNPH1 Pteropus vampyrus ENSPVAG00000007670 I 0.733
HNRNPF Pteropus vampyrus ENSPVAG00000011646 I 0.867
Hnrph1 Rattus norvegicus ENSRNOG00000003399 I 0.967
Hnrnph2 Rattus norvegicus ENSRNOG00000011661 I 0.943
Hnrnpf Rattus norvegicus ENSRNOG00000014562 I 0.867
ENSRNOG00000015533 Rattus norvegicus ENSRNOG00000015533 I 0.771
HNRNPH1 Sorex araneus ENSSARG00000003024 I 0.852
HNRNPF Sorex araneus ENSSARG00000010059 I 0.871
HNRNPH2 Sorex araneus ENSSARG00000014182 I 0.943
HNRNPF Sus scrofa ENSSSCG00000010203 I 0.862
HNRNPH1 Sus scrofa ENSSSCG00000014022 I 0.967
HNRNPH1 Taeniopygia guttata ENSTGUG00000001085 I 0.886
HNRNPH3 Tetraodon nigroviridis ENSTNIG00000013788 I 0.776
HNRNPH1 Takifugu rubripes ENSTRUG00000001031 I 0.895
HNRNPH3 Takifugu rubripes ENSTRUG00000005350 I 0.767
HNRNPH1 Tarsius syrichta ENSTSYG00000006417 I 0.862
HNRNPH2 Tarsius syrichta ENSTSYG00000007811 I 0.943
HNRNPH1 Tursiops truncatus ENSTTRG00000000470 I 0.843
HNRNPH2 Tursiops truncatus ENSTTRG00000012786 I 0.943
HNRNPH1 Vicugna pacos ENSVPAG00000007485 I 0.752
hnrnph2 Xenopus tropicalis ENSXETG00000018321 I 0.914