SRSF12 (Monodelphis domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSMODG00000018282 T39194_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Fusip1
M088_0.6 		Homo sapiens AGAGAVV RNAcompete
Ray et al.(2013)
RNCMPT00090 		0.847
Fusip1
M087_0.6 		Homo sapiens AGAGARR RNAcompete
Ray et al.(2013)
RNCMPT00089 		0.847
Fusip1
M086_0.6 		Homo sapiens ARAGRRR RNAcompete
Ray et al.(2013)
RNCMPT00088 		0.847
Fusip1
M019_0.6 		Homo sapiens AGAGAVM RNAcompete
Ray et al.(2013)
RNCMPT00019 		0.847
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000022797 RRM 12 83

Links

Other RRM family RBPs
Other Monodelphis domestica RBPs

76 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH46695 Xenopus laevis AAH46695 I 0.806
AAH84231 Xenopus laevis AAH84231 I 0.903
Ame_R010918 Ailuropoda melanoleuca Ame_R010918 I 0.847
ENSACAG00000005327 Anolis carolinensis ENSACAG00000005327 I 0.778
Q3ZBU5_BOVIN Bos taurus ENSBTAG00000008072 I 0.822
XM_547294.2 Canis familiaris ENSCAFG00000003095 I 0.795
ENSCAFG00000013066 Canis familiaris ENSCAFG00000013066 I 0.836
ENSCHOG00000004836 Choloepus hoffmanni ENSCHOG00000004836 I 0.822
ENSCHOG00000007773 Choloepus hoffmanni ENSCHOG00000007773 I 0.822
SRSF12 Choloepus hoffmanni ENSCHOG00000013911 I 0.875
LOC100396874 Callithrix jacchus ENSCJAG00000000822 I 0.917
ENSCJAG00000007019 Callithrix jacchus ENSCJAG00000007019 I 0.736
ENSCJAG00000010608 Callithrix jacchus ENSCJAG00000010608 I 0.764
LOC100387136 Callithrix jacchus ENSCJAG00000020883 I 0.822
ENSCJAG00000021801 Callithrix jacchus ENSCJAG00000021801 I 0.806
SRSF12 Cavia porcellus ENSCPOG00000010917 I 0.847
ENSCPOG00000024533 Cavia porcellus ENSCPOG00000024533 I 0.836
ENSCSAVG00000005130 Ciona savignyi ENSCSAVG00000005130 I 0.708
CR293507.1 Danio rerio ENSDARG00000022415 I 0.819
Srsf10 Dipodomys ordii ENSDORG00000009136 I 0.795
LOC100070965 Equus caballus ENSECAG00000019135 I 0.847
ENSECAG00000023709 Equus caballus ENSECAG00000023709 I 0.736
SRSF12 Erinaceus europaeus ENSEEUG00000011026 I 0.972
ENSEEUG00000014286 Erinaceus europaeus ENSEEUG00000014286 I 0.847
SRSF12 Echinops telfairi ENSETEG00000001386 I 0.778
ENSFCAG00000002888 Felis catus ENSFCAG00000002888 I 0.726
SRSF12 Homo sapiens ENSG00000154548 I 0.958
Fusip1 Homo sapiens ENSG00000188529 D 0.822
BX511012.1 Homo sapiens ENSG00000215699 I 0.822
ENSGACG00000002231 Gasterosteus aculeatus ENSGACG00000002231 I 0.836
Q5ZMR4_CHICK Gallus gallus ENSGALG00000004133 I 0.808
ENSGGOG00000000392 Gorilla gorilla ENSGGOG00000000392 I 0.836
SRSF12 Gorilla gorilla ENSGGOG00000024850 I 0.847
SRSF12 Loxodonta africana ENSLAFG00000005458 I 0.833
ENSLAFG00000026905 Loxodonta africana ENSLAFG00000026905 I 0.836
ENSMGAG00000005772 Meleagris gallopavo ENSMGAG00000005772 I 0.736
ENSMICG00000000520 Microcebus murinus ENSMICG00000000520 I 0.722
ENSMICG00000017029 Microcebus murinus ENSMICG00000017029 I 0.822
SRSF12 Myotis lucifugus ENSMLUG00000001545 I 0.833
ENSMMUG00000013784 Macaca mulatta ENSMMUG00000013784 I 0.822
SRSF12 Macaca mulatta ENSMMUG00000014941 I 0.958
XM_001362581.1 Monodelphis domestica ENSMODG00000013020 I 0.847
Srsf10 Mus musculus ENSMUSG00000028676 I 0.822
Srsf12 Mus musculus ENSMUSG00000054679 I 0.917
SRSF12 Oryctolagus cuniculus ENSOCUG00000000945 I 0.944
ENSOCUG00000021782 Oryctolagus cuniculus ENSOCUG00000021782 I 0.795
ENSOCUG00000024013 Oryctolagus cuniculus ENSOCUG00000024013 I 0.822
ENSOCUG00000028110 Oryctolagus cuniculus ENSOCUG00000028110 I 0.722
SRSF12 Otolemur garnettii ENSOGAG00000006421 I 0.833
ENSOGAG00000015374 Otolemur garnettii ENSOGAG00000015374 I 0.847
SRSF12 Ochotona princeps ENSOPRG00000016052 I 0.806
ENSOPRG00000018613 Ochotona princeps ENSOPRG00000018613 I 0.822
SRSF10 Oryzias latipes ENSORLG00000007691 I 0.833
ENSPCAG00000004059 Procavia capensis ENSPCAG00000004059 I 0.822
SRSF12 Procavia capensis ENSPCAG00000010020 I 0.972
ENSPPYG00000001726 Pongo pygmaeus ENSPPYG00000001726 I 0.847
SRSF12 Pan troglodytes ENSPTRG00000018415 I 0.958
XR_020461.1 Pan troglodytes ENSPTRG00000024234 I 0.822
SRSF12 Pteropus vampyrus ENSPVAG00000001046 I 0.833
ENSPVAG00000013611 Pteropus vampyrus ENSPVAG00000013611 I 0.822
D3ZB38_RAT Rattus norvegicus ENSRNOG00000007992 I 0.861
Srrp Rattus norvegicus ENSRNOG00000024247 I 0.917
SRSF12 Sorex araneus ENSSARG00000007795 I 0.833
SRSF12 Sus scrofa ENSSSCG00000004313 I 0.972
ENSSTOG00000000956 Spermophilus tridecemlineatus ENSSTOG00000000956 I 0.722
SRSF12 Spermophilus tridecemlineatus ENSSTOG00000007170 I 0.819
ENSTBEG00000008665 Tupaia belangeri ENSTBEG00000008665 I 0.750
ENSTBEG00000015120 Tupaia belangeri ENSTBEG00000015120 I 0.833
FUSIP1 Taeniopygia guttata ENSTGUG00000001178 I 0.819
SLC9A1 Tetraodon nigroviridis ENSTNIG00000005725 I 0.795
SRSF10 Takifugu rubripes ENSTRUG00000006317 I 0.836
SRSF12 Tarsius syrichta ENSTSYG00000001269 I 0.819
SRSF12 Tursiops truncatus ENSTTRG00000003682 I 0.972
ENSTTRG00000016150 Tursiops truncatus ENSTTRG00000016150 I 0.822
SRSF12 Vicugna pacos ENSVPAG00000004175 I 0.958
srsf12 Xenopus tropicalis ENSXETG00000005385 I 0.853