PHUM315130 (Pediculus humanus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PHUM315130 T45347_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		0.929
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
PHUM315130-PA RRM 39 107
PHUM315130-PA RRM 299 369

Links

Other RRM family RBPs
Other Pediculus humanus RBPs

64 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
62054 Helobdella robusta 62054 I 0.779
90208 Helobdella robusta 90208 I 0.794
AAEL000695 Aedes aegypti AAEL000695 I 0.707
AAEL014033 Aedes aegypti AAEL014033 I 0.921
AGAP004950 Anopheles gambiae AGAP004950 I 0.921
amel4_ncbi_hmm7761 Apis mellifera amel4_ncbi_hmm7761 I 0.900
BGIBMGA010431 Bombyx mori BGIBMGA010431 I 0.729
CJA07020 Caenorhabditis japonica CJA07020 I 0.743
CPIJ016329 Culex quinquefasciatus CPIJ016329 I 0.721
CpipJ_CPIJ016329 Culex pipiens CpipJ_CPIJ016329 I 0.721
CELF5 Anolis carolinensis ENSACAG00000016959 I 0.879
Q2KI16_BOVIN Bos taurus ENSBTAG00000008937 I 0.729
CELF5 Callithrix jacchus ENSCJAG00000014799 I 0.879
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.821
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.729
CELF5 Cavia porcellus ENSCPOG00000005740 I 0.879
ENSFCAG00000007908 Felis catus ENSFCAG00000007908 N 0.700
BRUNOL6 Homo sapiens ENSG00000140488 D 0.821
CELF5 Gasterosteus aculeatus ENSGACG00000012870 I 0.864
CELF6 Gasterosteus aculeatus ENSGACG00000016626 I 0.893
A5A2G4_CHICK Gallus gallus ENSGALG00000001966 I 0.900
A5A2G2_CHICK Gallus gallus ENSGALG00000002413 I 0.914
CELF5 Gorilla gorilla ENSGGOG00000002078 I 0.872
CELF2 Gorilla gorilla ENSGGOG00000009330 I 0.729
ENSGGOG00000023049 Gorilla gorilla ENSGGOG00000023049 I 0.807
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.907
HEXA Macaca mulatta ENSMMUG00000010687 I 0.821
CELF5 Macaca mulatta ENSMMUG00000015513 I 0.714
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.886
CELF5 Monodelphis domestica ENSMODG00000019151 I 0.879
Celf6 Mus musculus ENSMUSG00000032297 I 0.829
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.907
CELF2 Ornithorhynchus anatinus ENSOANG00000015432 I 0.729
CELF5 Ochotona princeps ENSOPRG00000007881 I 0.843
CELF6 Ochotona princeps ENSOPRG00000019169 I 0.829
CELF6 Oryzias latipes ENSORLG00000013392 I 0.900
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.821
Brunol4 Rattus norvegicus ENSRNOG00000014503 I 0.900
CELF3 Tupaia belangeri ENSTBEG00000010130 I 0.729
BRUNOL4 Taeniopygia guttata ENSTGUG00000001649 I 0.914
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.871
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.800
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.900
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.871
estExt_fgenesh2_pg.C_sca_1310025 Lottia gigantea estExt_fgenesh2_pg.C_sca_1310025 I 0.786
estExt_fgenesh2_pm.C_730008 Branchiostoma floridae estExt_fgenesh2_pm.C_730008 I 0.721
GF10965 Drosophila ananassae FBgn0088005 I 0.929
GG13757 Drosophila erecta FBgn0106020 I 0.929
GH14684 Drosophila grimshawi FBgn0122160 I 0.921
GI13095 Drosophila mojavensis FBgn0135852 I 0.921
GL21647 Drosophila persimilis FBgn0159240 I 0.893
GM24582 Drosophila sechellia FBgn0179445 I 0.929
GD12651 Drosophila simulans FBgn0184378 I 0.929
GJ13842 Drosophila virilis FBgn0201061 I 0.921
GK17101 Drosophila willistoni FBgn0219100 I 0.929
GE20053 Drosophila yakuba FBgn0237378 I 0.929
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.914
bru-3 Drosophila melanogaster FBgn0262350 D 0.929
FBgn0262475 Drosophila melanogaster FBgn0262475 I 0.700
LOAG_05508 Loa loa LOAG_05508 I 0.814
nasonia_NCBI_hmm496514 Nasonia vitripennis nasonia_NCBI_hmm496514 I 0.886
Sjc_0024790 Schistosoma japonicum Sjc_0024790 I 0.757
Smp_041280 Schistosoma mansoni Smp_041280 I 0.836
Smp_131780 Schistosoma mansoni Smp_131780 I 0.764