fgenesh1_pg.00771_#_290 (Aspergillus carbonarius)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pg.00771_#_290 T56531_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.00771_#_290 RRM 35 105

Links

Other RRM family RBPs
Other Aspergillus carbonarius RBPs

56 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB08288.1 Alternaria brassicicola AB08288.1 N 0.775
ARB_06649 Arthroderma benhamiae ARB_06649 N 0.930
BC1G_09608 Botrytis cinerea BC1G_09608 N 0.845
BDBG_01138 Blastomyces dermatitidis BDBG_01138 N 0.887
ACLA_012010 Aspergillus clavatus CADACLAG00000982 N 0.944
An07g05140 Aspergillus niger CADANGAG00005786 N 0.972
ANIA_04665 Aspergillus nidulans CADANIAG00005768 N 0.986
ATEG_05773 Aspergillus terreus CADATEAG00002943 N 0.930
NFIA_078760 Neosartorya fischeri CADNFIAG00007376 N 0.930
CC1G_01457 Coprinopsis cinerea CC1G_01457 N 0.732
CHGG_06716 Chaetomium globosum CHGG_06716 N 0.718
CIMG_06780 Coccidioides immitis CIMG_06780 N 0.859
CPSG_07351 Coccidioides posadasii CPSG_07351 N 0.859
EAT89749.2 Phaeosphaeria nodorum EAT89749.2 N 0.789
estExt_fgenesh1_kg.C_50230 Cryphonectria parasitica estExt_fgenesh1_kg.C_50230 N 0.775
estExt_fgenesh1_pg.C_chr_10724 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_10724 N 0.831
estExt_Genewise1.C_160643 Cochliobolus heterostrophus C5 estExt_Genewise1.C_160643 N 0.803
estExt_Genewise1.C_21128 Neurospora discreta estExt_Genewise1.C_21128 N 0.746
estExt_Genewise1Plus.C_110324 Daphnia pulex estExt_Genewise1Plus.C_110324 N 0.718
estExt_Genewise1Plus.C_180344 Neurospora tetrasperma estExt_Genewise1Plus.C_180344 N 0.746
e_gw1.1.4685.1 Myceliophthora thermophila e_gw1.1.4685.1 N 0.732
e_gw1.1.5996.1 Thielavia terrestris e_gw1.1.5996.1 N 0.761
e_gw1.12.826.1 Trichoderma virens e_gw1.12.826.1 N 0.761
e_gw1.18.2245.1 Nectria haematococca e_gw1.18.2245.1 N 0.761
e_gw1.2.1042.1 Sporobolomyces roseus e_gw1.2.1042.1 N 0.704
fgenesh1_pm.C_scaffold_1000287 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_1000287 N 0.817
FGSG_09419 Fusarium graminearum FGSG_09419 N 0.732
FOXG_06071 Fusarium oxysporum FOXG_06071 N 0.718
FVEG_03939 Fusarium verticillioides FVEG_03939 N 0.704
GLRG_07641 Colletotrichum graminicola GLRG_07641 N 0.704
GSTUMT00000089001 Tuber melanosporum GSTUMT00000089001 N 0.817
gw1.1.2440.1 Mucor circinelloides gw1.1.2440.1 N 0.761
gw1.16.255.1 Trichoderma reesei gw1.16.255.1 N 0.789
gw1.4.1321.1 Pleurotus ostreatus gw1.4.1321.1 N 0.718
gw1.4.2036.1 Heterobasidion annosum gw1.4.2036.1 N 0.732
gw1.5.1175.1 Trichoderma atroviride gw1.5.1175.1 N 0.761
HCAG_00719 Histoplasma capsulatum HCAG_00719 N 0.873
MCYG_01624 Microsporum canis MCYG_01624 N 0.930
MGG_03086 Magnaporthe oryzae MGG_03086 N 0.746
MGYG_04448 Microsporum gypseum MGYG_04448 N 0.915
NCU02467 Neurospora crassa NCU02467 N 0.746
PABG_03870 Paracoccidioides brasiliensis PABG_03870 N 0.873
Pa_1_22200 Podospora anserina Pa_1_22200 N 0.718
Pc22g16450 Penicillium chrysogenum Pc22g16450 N 0.915
PMAA_079770 Penicillium marneffei PMAA_079770 N 0.930
PredSwiss_CON1238.1 Pneumocystis carinii PredSwiss_CON1238.1 N 0.761
PTRG_01927 Pyrenophora tritici repentis PTRG_01927 N 0.789
SNOG_03018 Stagonospora nodorum SNOG_03018 N 0.789
SS1G_03313 Sclerotinia sclerotiorum SS1G_03313 N 0.831
TEQG_02324 Trichophyton equinum TEQG_02324 N 0.930
TERG_07863 Trichophyton rubrum TERG_07863 N 0.930
TESG_00774 Trichophyton tonsurans TESG_00774 N 0.930
TRV_02420 Trichophyton verrucosum TRV_02420 N 0.930
UREG_03685 Uncinocarpus reesii UREG_03685 N 0.845
VDAG_02758 Verticillium dahliae VDAG_02758 N 0.718
VDBG_02287 Verticillium albo atrum VDBG_02287 N 0.718