CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MEX3D
(
Felis catus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSFCAG00000002615
T18766_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
CG11360
M122_0.6
Drosophila melanogaster
GAGUDW
RNAcompete
Ray et al.(2013)
RNCMPT00129
0.711
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000002409
KH
1
41
CKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVEMAKREI
ENSFCAP00000002409
KH
76
135
TIQVRVPYRVVGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENVDRAREEI
Links
Other
KH
family RBPs
Other
Felis catus
RBPs
138 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CG11360
Drosophila melanogaster
FBgn0039920
D
0.711
Mex3b
Mus musculus
ENSMUSG00000057706
I
0.931
MEX3B
Sorex araneus
ENSSARG00000006007
I
0.941
Mex3d
Rattus norvegicus
ENSRNOG00000030830
I
0.803
D3ZFL6_RAT
Rattus norvegicus
ENSRNOG00000025142
I
0.931
Mex3c
Rattus norvegicus
ENSRNOG00000015777
I
0.777
MEX3C
Pteropus vampyrus
ENSPVAG00000015135
I
0.777
MEX3A
Pteropus vampyrus
ENSPVAG00000010333
I
0.718
MEX3B
Pteropus vampyrus
ENSPVAG00000000093
I
0.785
MEX3C
Sorex araneus
ENSSARG00000006940
I
0.931
MEX3C
Tupaia belangeri
ENSTBEG00000014438
I
0.931
MEX3D
Taeniopygia guttata
ENSTGUG00000000201
I
0.779
MEX3B
Tetraodon nigroviridis
ENSTNIG00000003398
I
0.769
MEX3D
Tetraodon nigroviridis
ENSTNIG00000015325
I
0.762
MEX3B
Takifugu rubripes
ENSTRUG00000000367
I
0.903
MEX3D
Takifugu rubripes
ENSTRUG00000007986
I
0.950
MEX3C
Takifugu rubripes
ENSTRUG00000011888
I
0.895
MEX3C
Tursiops truncatus
ENSTTRG00000004570
I
0.777
MEX3D
Pan troglodytes
ENSPTRG00000010208
I
0.803
MEX3C
Pan troglodytes
ENSPTRG00000010029
I
0.777
MEX3B
Pan troglodytes
ENSPTRG00000007373
I
0.785
MEX3C
Ornithorhynchus anatinus
ENSOANG00000008116
I
0.922
MEX3D
Ornithorhynchus anatinus
ENSOANG00000011764
I
0.738
MEX3A
Oryctolagus cuniculus
ENSOCUG00000005640
I
0.000
MEX3B
Oryctolagus cuniculus
ENSOCUG00000011603
I
0.931
ENSOCUG00000012549
Oryctolagus cuniculus
ENSOCUG00000012549
I
0.777
ENSOCUG00000014295
Oryctolagus cuniculus
ENSOCUG00000014295
I
0.000
MEX3B
Otolemur garnettii
ENSOGAG00000016362
I
0.891
MEX3A
Ochotona princeps
ENSOPRG00000002937
I
0.000
MEX3D
Ochotona princeps
ENSOPRG00000008708
I
0.990
MEX3B
Ochotona princeps
ENSOPRG00000009604
I
0.785
MEX3C
Oryzias latipes
ENSORLG00000004985
I
0.785
MEX3C
Procavia capensis
ENSPCAG00000009258
I
0.785
MEX3D
Procavia capensis
ENSPCAG00000010972
I
0.990
MEX3B
Procavia capensis
ENSPCAG00000014150
I
0.941
ENSPPYG00000000729
Pongo pygmaeus
ENSPPYG00000000729
I
0.000
ENSPPYG00000006723
Pongo pygmaeus
ENSPPYG00000006723
I
0.785
ENSPPYG00000009324
Pongo pygmaeus
ENSPPYG00000009324
I
0.803
MEX3D
Tursiops truncatus
ENSTTRG00000008132
I
0.803
MEX3A
Tursiops truncatus
ENSTTRG00000013346
I
0.000
estExt_fgenesh2_pg.C_2010087
Branchiostoma floridae
estExt_fgenesh2_pg.C_2010087
I
0.793
estExt_Genewise1.C_sca_540218
Lottia gigantea
estExt_Genewise1.C_sca_540218
I
0.752
BGIBMGA012436
Bombyx mori
BGIBMGA012436
I
0.843
Ame_R004658
Ailuropoda melanoleuca
Ame_R004658
I
0.777
Ame_R007174
Ailuropoda melanoleuca
Ame_R007174
I
0.785
Ame_R011921
Ailuropoda melanoleuca
Ame_R011921
I
0.962
Ame_R015561
Ailuropoda melanoleuca
Ame_R015561
I
0.000
XP_001175528.1
Strongylocentrotus purpuratus
XP_001175528.1
I
0.727
XP_002168292.1
Hydra magnipapillata
XP_002168292.1
I
0.711
XP_786425.2
Strongylocentrotus purpuratus
XP_786425.2
I
0.727
A1L3F4
Xenopus laevis
A1L3F4
I
0.777
AAI28670
Xenopus laevis
AAI28670
I
0.792
AAI30070
Xenopus laevis
AAI30070
I
0.777
AAI30114
Xenopus laevis
AAI30114
I
0.754
AAI30196
Xenopus laevis
AAI30196
I
0.702
AAI33220
Xenopus laevis
AAI33220
I
0.754
AAI42552
Xenopus laevis
AAI42552
I
0.762
e_gw1.3.1475.1
Trichoplax adhaerens
e_gw1.3.1475.1
I
0.843
e_gw1.312.50.1
Capitella teleta
e_gw1.312.50.1
I
0.832
MEX3C
Vicugna pacos
ENSVPAG00000003137
I
0.931
mex3c
Xenopus tropicalis
ENSXETG00000022367
I
0.792
mex-3
Caenorhabditis elegans
F53G12.5
I
0.000
GA10947-RA
Drosophila pseudoobscura
FBgn0071003
I
0.711
GF20555
Drosophila ananassae
FBgn0097561
I
0.702
GG16398
Drosophila erecta
FBgn0108630
I
0.711
GH23938
Drosophila grimshawi
FBgn0131395
I
0.711
GL18139
Drosophila persimilis
FBgn0155742
I
0.711
GM26809
Drosophila sechellia
FBgn0181661
I
0.711
GD24410
Drosophila simulans
FBgn0195748
I
0.711
GJ18673
Drosophila virilis
FBgn0205827
I
0.711
GK13594
Drosophila willistoni
FBgn0215602
I
0.711
GE14558
Drosophila yakuba
FBgn0232157
I
0.711
PHUM418100
Pediculus humanus
PHUM418100
I
0.864
SNAPOd2T00016811001
Oikopleura dioica
SNAPOd2T00016811001
I
0.000
Aqu1.215178
Amphimedon queenslandica
Aqu1.215178
I
0.000
e_gw1.15.409.1
Daphnia pulex
e_gw1.15.409.1
I
0.719
BAH79688
Xenopus laevis
BAH79688
I
0.777
CpipJ_CPIJ010634
Culex pipiens
CpipJ_CPIJ010634
I
0.000
MEX3B
Cavia porcellus
ENSCPOG00000023663
I
0.803
MEX3A
Cavia porcellus
ENSCPOG00000020219
I
0.000
MEX3C
Cavia porcellus
ENSCPOG00000009646
I
0.777
ENSCPOG00000008241
Cavia porcellus
ENSCPOG00000008241
I
0.779
MEX3B
Callithrix jacchus
ENSCJAG00000008043
I
0.785
LOC100410413
Callithrix jacchus
ENSCJAG00000007711
I
0.000
LOC100410023
Callithrix jacchus
ENSCJAG00000001902
I
0.777
ENSCING00000002603
Ciona intestinalis
ENSCING00000002603
I
0.736
MEX3B
Danio rerio
ENSDARG00000058369
I
0.777
MEX3C
Danio rerio
ENSDARG00000068971
I
0.911
MEX3C
Erinaceus europaeus
ENSEEUG00000010864
I
0.931
MEX3C
Equus caballus
ENSECAG00000021727
I
0.777
MEX3B
Equus caballus
ENSECAG00000013497
I
0.785
Mex3c
Dipodomys ordii
ENSDORG00000007962
I
0.931
Mex3a
Dipodomys ordii
ENSDORG00000002921
I
0.000
MEX3B
Dasypus novemcinctus
ENSDNOG00000012736
I
0.782
MEX3C
Dasypus novemcinctus
ENSDNOG00000006544
I
0.777
MEX3A
Danio rerio
ENSDARG00000076638
I
0.000
MEX3C
Choloepus hoffmanni
ENSCHOG00000004915
I
0.777
MEX3D
Canis familiaris
ENSCAFG00000023712
I
0.990
CJA18034
Caenorhabditis japonica
CJA18034
I
0.000
CBN24563
Caenorhabditis brenneri
CBN24563
I
0.000
CBN20397
Caenorhabditis brenneri
CBN20397
I
0.000
CBG05100
Caenorhabditis briggsae
CBG05100
I
0.000
AGAP013259
Anopheles gambiae
AGAP013259
I
0.000
AAEL012708
Aedes aegypti
AAEL012708
I
0.000
nasonia_NCBI_hmm456104
Nasonia vitripennis
nasonia_NCBI_hmm456104
I
0.736
amel4_ncbi_hmm6985
Apis mellifera
amel4_ncbi_hmm6985
I
0.736
CPIJ010634
Culex quinquefasciatus
CPIJ010634
I
0.000
CRE03823
Caenorhabditis remanei
CRE03823
I
0.000
MEX3B
Canis familiaris
ENSCAFG00000013759
I
0.931
MEX3C
Canis familiaris
ENSCAFG00000000162
I
0.783
MEX3D
Bos taurus
ENSBTAG00000044028
I
0.990
MEX3A
Bos taurus
ENSBTAG00000019158
I
0.000
MEX3B
Bos taurus
ENSBTAG00000016630
I
0.785
Q2YDI4_BOVIN
Bos taurus
ENSBTAG00000014886
I
0.922
MEX3B
Anolis carolinensis
ENSACAG00000011072
I
0.922
MEX3C
Anolis carolinensis
ENSACAG00000010265
I
0.922
MEX3C
Echinops telfairi
ENSETEG00000003647
I
0.941
Mex3d
Mus musculus
ENSMUSG00000048696
I
0.803
MEX3D
Macropus eugenii
ENSMEUG00000016404
I
0.770
MEX3C
Loxodonta africana
ENSLAFG00000027818
I
0.777
MEX3B
Macropus eugenii
ENSMEUG00000002402
I
0.777
MEX3C
Macropus eugenii
ENSMEUG00000015929
I
0.931
MEX3D
Meleagris gallopavo
ENSMGAG00000002325
I
0.951
MEX3A
Microcebus murinus
ENSMICG00000002233
I
0.000
MEX3C
Microcebus murinus
ENSMICG00000005815
I
0.931
MEX3B
Loxodonta africana
ENSLAFG00000006027
I
0.931
MEX3C
Myotis lucifugus
ENSMLUG00000012585
I
0.931
MEX3B
Macaca mulatta
ENSMMUG00000018639
I
0.785
MEX3A
Macaca mulatta
ENSMMUG00000022307
I
0.000
MEX3C
Macaca mulatta
ENSMMUG00000023652
I
0.777
MEX3D
Monodelphis domestica
ENSMODG00000004116
I
0.770
MEX3C
Monodelphis domestica
ENSMODG00000011001
I
0.777
MEX3A
Monodelphis domestica
ENSMODG00000016954
I
0.000
MEX3B
Monodelphis domestica
ENSMODG00000019387
I
0.931
Mex3c
Mus musculus
ENSMUSG00000037253
I
0.777
MEX3C
Gorilla gorilla
ENSGGOG00000014875
I
0.777
MEX3A
Gorilla gorilla
ENSGGOG00000004513
I
0.000
MEX3C
Homo sapiens
ENSG00000176624
I
0.777
MEX3D
Homo sapiens
ENSG00000181588
I
0.803
MEX3B
Gasterosteus aculeatus
ENSGACG00000012530
I
0.744
MEX3B
Homo sapiens
ENSG00000183496
I
0.785
MEX3C
Gasterosteus aculeatus
ENSGACG00000007490
I
0.769
MEX3D
Gasterosteus aculeatus
ENSGACG00000015299
I
0.754
MEX3B
Gorilla gorilla
ENSGGOG00000000597
I
0.785
MEX3D
Gorilla gorilla
ENSGGOG00000001083
I
0.803
MEX3D
Gallus gallus
ENSGALG00000001106
I
0.951
MEX3A
Takifugu rubripes
ENSTRUG00000007796
N
0.808
MEX3A
Pan troglodytes
ENSPTRG00000030373
N
0.832
LOC100063974
Equus caballus
ENSECAG00000007279
N
0.824
MEX3A
Loxodonta africana
ENSLAFG00000009220
N
0.824
MEX3A
Tetraodon nigroviridis
ENSTNIG00000004473
N
0.808
MEX3A
Myotis lucifugus
ENSMLUG00000010185
N
0.832
MEX3A
Taeniopygia guttata
ENSTGUG00000003692
N
0.817
MEX3A
Gallus gallus
ENSGALG00000014016
N
0.825
mex3a
Xenopus tropicalis
ENSXETG00000012704
N
0.825
MEX3A
Sorex araneus
ENSSARG00000009868
N
0.832
MEX3A
Gasterosteus aculeatus
ENSGACG00000013282
N
0.832
MEX3A
Meleagris gallopavo
ENSMGAG00000015563
N
0.825
MEX3A
Anolis carolinensis
ENSACAG00000003739
N
0.825