GA10947-RA (Drosophila pseudoobscura)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 FBgn0071003 T19807_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG11360
M122_0.6 		Drosophila melanogaster GAGUDW RNAcompete
Ray et al.(2013)
RNCMPT00129 		1.000
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0285053 KH 129 189
FBpp0285053 KH 246 305

Links

Other KH family RBPs
Other Drosophila pseudoobscura RBPs

147 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GD24410 Drosophila simulans FBgn0195748 I 1.000
CG11360 Drosophila melanogaster FBgn0039920 D 1.000
GM26809 Drosophila sechellia FBgn0181661 I 1.000
GL18139 Drosophila persimilis FBgn0155742 I 1.000
GE14558 Drosophila yakuba FBgn0232157 I 1.000
GG16398 Drosophila erecta FBgn0108630 I 1.000
GH23938 Drosophila grimshawi FBgn0131395 I 0.983
GJ18673 Drosophila virilis FBgn0205827 I 0.983
GF20555 Drosophila ananassae FBgn0097561 I 0.975
GK13594 Drosophila willistoni FBgn0215602 I 0.975
e_gw1.15.409.1 Daphnia pulex e_gw1.15.409.1 I 0.893
ENSCPOG00000008241 Cavia porcellus ENSCPOG00000008241 I 0.885
XP_001175528.1 Strongylocentrotus purpuratus XP_001175528.1 I 0.885
estExt_fgenesh2_pg.C_2010087 Branchiostoma floridae estExt_fgenesh2_pg.C_2010087 I 0.885
estExt_Genewise1.C_sca_540218 Lottia gigantea estExt_Genewise1.C_sca_540218 I 0.885
XP_786425.2 Strongylocentrotus purpuratus XP_786425.2 I 0.885
MEX3B Monodelphis domestica ENSMODG00000019387 I 0.877
MEX3B Homo sapiens ENSG00000183496 I 0.877
MEX3B Loxodonta africana ENSLAFG00000006027 I 0.877
MEX3B Pan troglodytes ENSPTRG00000007373 I 0.877
ENSPPYG00000006723 Pongo pygmaeus ENSPPYG00000006723 I 0.877
MEX3B Equus caballus ENSECAG00000013497 I 0.877
MEX3B Bos taurus ENSBTAG00000016630 I 0.877
MEX3B Gorilla gorilla ENSGGOG00000000597 I 0.877
Ame_R007174 Ailuropoda melanoleuca Ame_R007174 I 0.877
MEX3B Ochotona princeps ENSOPRG00000009604 I 0.877
MEX3B Pteropus vampyrus ENSPVAG00000000093 I 0.877
MEX3C Procavia capensis ENSPCAG00000009258 I 0.877
MEX3B Callithrix jacchus ENSCJAG00000008043 I 0.877
MEX3B Macaca mulatta ENSMMUG00000018639 I 0.877
XP_002168292.1 Hydra magnipapillata XP_002168292.1 I 0.876
MEX3C Equus caballus ENSECAG00000021727 I 0.869
Mex3c Rattus norvegicus ENSRNOG00000015777 I 0.869
MEX3C Takifugu rubripes ENSTRUG00000011888 I 0.869
MEX3C Cavia porcellus ENSCPOG00000009646 I 0.869
MEX3C Dasypus novemcinctus ENSDNOG00000006544 I 0.869
Mex3c Mus musculus ENSMUSG00000037253 I 0.869
MEX3B Danio rerio ENSDARG00000058369 I 0.869
MEX3C Pteropus vampyrus ENSPVAG00000015135 I 0.869
MEX3C Choloepus hoffmanni ENSCHOG00000004915 I 0.869
LOC100410023 Callithrix jacchus ENSCJAG00000001902 I 0.869
MEX3C Loxodonta africana ENSLAFG00000027818 I 0.869
MEX3C Tursiops truncatus ENSTTRG00000004570 I 0.869
A1L3F4 Xenopus laevis A1L3F4 I 0.869
MEX3B Macropus eugenii ENSMEUG00000002402 I 0.869
Ame_R004658 Ailuropoda melanoleuca Ame_R004658 I 0.869
MEX3C Macaca mulatta ENSMMUG00000023652 I 0.869
MEX3C Oryzias latipes ENSORLG00000004985 I 0.869
MEX3C Pan troglodytes ENSPTRG00000010029 I 0.869
MEX3C Homo sapiens ENSG00000176624 I 0.869
AAI30070 Xenopus laevis AAI30070 I 0.869
nasonia_NCBI_hmm456104 Nasonia vitripennis nasonia_NCBI_hmm456104 I 0.869
ENSOCUG00000012549 Oryctolagus cuniculus ENSOCUG00000012549 I 0.869
MEX3C Gorilla gorilla ENSGGOG00000014875 I 0.869
amel4_ncbi_hmm6985 Apis mellifera amel4_ncbi_hmm6985 I 0.869
BAH79688 Xenopus laevis BAH79688 I 0.869
MEX3C Monodelphis domestica ENSMODG00000011001 I 0.869
gw.320.9.1 Nematostella vectensis gw.320.9.1 I 0.868
MEX3C Gasterosteus aculeatus ENSGACG00000007490 I 0.861
MEX3B Takifugu rubripes ENSTRUG00000000367 I 0.861
MEX3D Tetraodon nigroviridis ENSTNIG00000015325 I 0.861
mex3c Xenopus tropicalis ENSXETG00000022367 I 0.861
AAI28670 Xenopus laevis AAI28670 I 0.861
MEX3B Tetraodon nigroviridis ENSTNIG00000003398 I 0.861
MEX3D Takifugu rubripes ENSTRUG00000007986 I 0.861
MEX3D Monodelphis domestica ENSMODG00000004116 I 0.852
ENSCING00000002603 Ciona intestinalis ENSCING00000002603 I 0.852
MEX3D Gasterosteus aculeatus ENSGACG00000015299 I 0.852
MEX3D Macropus eugenii ENSMEUG00000016404 I 0.852
MEX3D Taeniopygia guttata ENSTGUG00000000201 I 0.852
MEX3D Homo sapiens ENSG00000181588 I 0.844
MEX3D Gorilla gorilla ENSGGOG00000001083 I 0.844
Mex3d Mus musculus ENSMUSG00000048696 I 0.844
MEX3D Tursiops truncatus ENSTTRG00000008132 I 0.844
MEX3D Pan troglodytes ENSPTRG00000010208 I 0.844
Mex3d Rattus norvegicus ENSRNOG00000030830 I 0.844
MEX3B Cavia porcellus ENSCPOG00000023663 I 0.844
MEX3C Canis familiaris ENSCAFG00000000162 I 0.844
ENSPPYG00000009324 Pongo pygmaeus ENSPPYG00000009324 I 0.844
MEX3B Dasypus novemcinctus ENSDNOG00000012736 I 0.836
MEX3B Gasterosteus aculeatus ENSGACG00000012530 I 0.836
AAI30114 Xenopus laevis AAI30114 I 0.836
AAI42552 Xenopus laevis AAI42552 I 0.836
AAI33220 Xenopus laevis AAI33220 I 0.836
CRE03823 Caenorhabditis remanei CRE03823 I 0.835
mex-3 Caenorhabditis elegans F53G12.5 I 0.835
CBN20397 Caenorhabditis brenneri CBN20397 I 0.826
CBN24563 Caenorhabditis brenneri CBN24563 I 0.826
MEX3A Danio rerio ENSDARG00000076638 I 0.826
AAI30196 Xenopus laevis AAI30196 I 0.826
MEX3D Ornithorhynchus anatinus ENSOANG00000011764 I 0.820
MEX3A Macaca mulatta ENSMMUG00000022307 I 0.818
MEX3A Oryctolagus cuniculus ENSOCUG00000005640 I 0.818
ENSPPYG00000000729 Pongo pygmaeus ENSPPYG00000000729 I 0.818
MEX3A Ochotona princeps ENSOPRG00000002937 I 0.818
MEX3A Monodelphis domestica ENSMODG00000016954 I 0.818
LOC100410413 Callithrix jacchus ENSCJAG00000007711 I 0.818
Mex3a Dipodomys ordii ENSDORG00000002921 I 0.818
MEX3A Bos taurus ENSBTAG00000019158 I 0.818
CBG05100 Caenorhabditis briggsae CBG05100 I 0.818
MEX3A Gorilla gorilla ENSGGOG00000004513 I 0.818
Ame_R015561 Ailuropoda melanoleuca Ame_R015561 I 0.818
MEX3A Cavia porcellus ENSCPOG00000020219 I 0.818
CJA18034 Caenorhabditis japonica CJA18034 I 0.810
MEX3A Tursiops truncatus ENSTTRG00000013346 I 0.802
Aqu1.215178 Amphimedon queenslandica Aqu1.215178 I 0.793
CpipJ_CPIJ010634 Culex pipiens CpipJ_CPIJ010634 I 0.785
AGAP013259 Anopheles gambiae AGAP013259 I 0.785
AAEL012708 Aedes aegypti AAEL012708 I 0.785
CPIJ010634 Culex quinquefasciatus CPIJ010634 I 0.785
MEX3A Microcebus murinus ENSMICG00000002233 I 0.769
ENSOCUG00000014295 Oryctolagus cuniculus ENSOCUG00000014295 I 0.760
MEX3A Pteropus vampyrus ENSPVAG00000010333 I 0.760
MEX3D Meleagris gallopavo ENSMGAG00000002325 I 0.730
MEX3B Sorex araneus ENSSARG00000006007 I 0.727
MEX3B Procavia capensis ENSPCAG00000014150 I 0.727
MEX3C Echinops telfairi ENSETEG00000003647 I 0.727
BGIBMGA012436 Bombyx mori BGIBMGA012436 I 0.727
e_gw1.3.1475.1 Trichoplax adhaerens e_gw1.3.1475.1 I 0.727
SNAPOd2T00016811001 Oikopleura dioica SNAPOd2T00016811001 I 0.727
e_gw1.312.50.1 Capitella teleta e_gw1.312.50.1 I 0.727
MEX3B Canis familiaris ENSCAFG00000013759 I 0.721
Mex3b Mus musculus ENSMUSG00000057706 I 0.721
PHUM418100 Pediculus humanus PHUM418100 I 0.721
D3ZFL6_RAT Rattus norvegicus ENSRNOG00000025142 I 0.721
MEX3B Oryctolagus cuniculus ENSOCUG00000011603 I 0.721
MEX3C Vicugna pacos ENSVPAG00000003137 I 0.719
MEX3C Sorex araneus ENSSARG00000006940 I 0.719
MEX3C Tupaia belangeri ENSTBEG00000014438 I 0.719
Mex3c Dipodomys ordii ENSDORG00000007962 I 0.719
MEX3C Macropus eugenii ENSMEUG00000015929 I 0.719
MEX3C Erinaceus europaeus ENSEEUG00000010864 I 0.719
MEX3C Microcebus murinus ENSMICG00000005815 I 0.719
MEX3C Myotis lucifugus ENSMLUG00000012585 I 0.719
MEX3B Anolis carolinensis ENSACAG00000011072 I 0.713
MEX3C Anolis carolinensis ENSACAG00000010265 I 0.713
MEX3C Ornithorhynchus anatinus ENSOANG00000008116 I 0.713
Q2YDI4_BOVIN Bos taurus ENSBTAG00000014886 I 0.713
MEX3D Gallus gallus ENSGALG00000001106 I 0.713
MEX3D Procavia capensis ENSPCAG00000010972 I 0.711
MEX3D Ochotona princeps ENSOPRG00000008708 I 0.711
MEX3D Felis catus ENSFCAG00000002615 I 0.711
MEX3D Bos taurus ENSBTAG00000044028 I 0.705
Ame_R011921 Ailuropoda melanoleuca Ame_R011921 I 0.705
MEX3D Canis familiaris ENSCAFG00000023712 I 0.705
MEX3C Danio rerio ENSDARG00000068971 I 0.702
MEX3B Otolemur garnettii ENSOGAG00000016362 I 0.702