AAI33220 (Xenopus laevis)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 AAI33220 T22138_0.6 Xenbase (2010-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CG11360
M122_0.6 		Drosophila melanogaster GAGUDW RNAcompete
Ray et al.(2013)
RNCMPT00129 		0.836
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AAI33220 KH 2 62
AAI33220 KH 97 156

Links

Other KH family RBPs
Other Xenopus laevis RBPs

144 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAI30114 Xenopus laevis AAI30114 I 1.000
MEX3D Macropus eugenii ENSMEUG00000016404 I 0.959
MEX3D Monodelphis domestica ENSMODG00000004116 I 0.959
AAI42552 Xenopus laevis AAI42552 I 0.959
MEX3D Taeniopygia guttata ENSTGUG00000000201 I 0.950
MEX3D Pan troglodytes ENSPTRG00000010208 I 0.942
MEX3B Cavia porcellus ENSCPOG00000023663 I 0.942
Mex3d Mus musculus ENSMUSG00000048696 I 0.942
Mex3d Rattus norvegicus ENSRNOG00000030830 I 0.942
ENSPPYG00000009324 Pongo pygmaeus ENSPPYG00000009324 I 0.942
MEX3D Gorilla gorilla ENSGGOG00000001083 I 0.942
MEX3D Homo sapiens ENSG00000181588 I 0.942
MEX3D Takifugu rubripes ENSTRUG00000007986 I 0.942
MEX3D Tursiops truncatus ENSTTRG00000008132 I 0.942
MEX3D Tetraodon nigroviridis ENSTNIG00000015325 I 0.942
MEX3D Gasterosteus aculeatus ENSGACG00000015299 I 0.934
ENSCPOG00000008241 Cavia porcellus ENSCPOG00000008241 I 0.902
estExt_fgenesh2_pg.C_2010087 Branchiostoma floridae estExt_fgenesh2_pg.C_2010087 I 0.902
MEX3D Ornithorhynchus anatinus ENSOANG00000011764 I 0.901
MEX3B Homo sapiens ENSG00000183496 I 0.893
MEX3B Loxodonta africana ENSLAFG00000006027 I 0.893
MEX3C Loxodonta africana ENSLAFG00000027818 I 0.893
MEX3C Macaca mulatta ENSMMUG00000023652 I 0.893
MEX3C Gorilla gorilla ENSGGOG00000014875 I 0.893
MEX3B Macaca mulatta ENSMMUG00000018639 I 0.893
MEX3B Gorilla gorilla ENSGGOG00000000597 I 0.893
MEX3B Ochotona princeps ENSOPRG00000009604 I 0.893
MEX3C Pteropus vampyrus ENSPVAG00000015135 I 0.893
MEX3B Pteropus vampyrus ENSPVAG00000000093 I 0.893
Mex3c Rattus norvegicus ENSRNOG00000015777 I 0.893
MEX3C Tursiops truncatus ENSTTRG00000004570 I 0.893
Ame_R007174 Ailuropoda melanoleuca Ame_R007174 I 0.893
Ame_R004658 Ailuropoda melanoleuca Ame_R004658 I 0.893
MEX3C Pan troglodytes ENSPTRG00000010029 I 0.893
MEX3B Pan troglodytes ENSPTRG00000007373 I 0.893
ENSOCUG00000012549 Oryctolagus cuniculus ENSOCUG00000012549 I 0.893
Mex3c Mus musculus ENSMUSG00000037253 I 0.893
MEX3C Homo sapiens ENSG00000176624 I 0.893
MEX3C Procavia capensis ENSPCAG00000009258 I 0.893
ENSPPYG00000006723 Pongo pygmaeus ENSPPYG00000006723 I 0.893
MEX3C Monodelphis domestica ENSMODG00000011001 I 0.893
MEX3B Monodelphis domestica ENSMODG00000019387 I 0.893
MEX3C Cavia porcellus ENSCPOG00000009646 I 0.893
MEX3B Callithrix jacchus ENSCJAG00000008043 I 0.893
LOC100410023 Callithrix jacchus ENSCJAG00000001902 I 0.893
MEX3C Choloepus hoffmanni ENSCHOG00000004915 I 0.893
MEX3C Dasypus novemcinctus ENSDNOG00000006544 I 0.893
MEX3B Bos taurus ENSBTAG00000016630 I 0.893
MEX3C Equus caballus ENSECAG00000021727 I 0.893
MEX3B Equus caballus ENSECAG00000013497 I 0.893
MEX3B Danio rerio ENSDARG00000058369 I 0.885
MEX3C Oryzias latipes ENSORLG00000004985 I 0.885
AAI28670 Xenopus laevis AAI28670 I 0.885
mex3c Xenopus tropicalis ENSXETG00000022367 I 0.885
MEX3B Macropus eugenii ENSMEUG00000002402 I 0.885
BAH79688 Xenopus laevis BAH79688 I 0.877
AAI30070 Xenopus laevis AAI30070 I 0.877
A1L3F4 Xenopus laevis A1L3F4 I 0.877
MEX3B Tetraodon nigroviridis ENSTNIG00000003398 I 0.877
MEX3C Takifugu rubripes ENSTRUG00000011888 I 0.877
MEX3B Takifugu rubripes ENSTRUG00000000367 I 0.877
MEX3C Canis familiaris ENSCAFG00000000162 I 0.869
MEX3C Gasterosteus aculeatus ENSGACG00000007490 I 0.869
estExt_Genewise1.C_sca_540218 Lottia gigantea estExt_Genewise1.C_sca_540218 I 0.861
MEX3B Dasypus novemcinctus ENSDNOG00000012736 I 0.852
ENSCING00000002603 Ciona intestinalis ENSCING00000002603 I 0.844
MEX3B Gasterosteus aculeatus ENSGACG00000012530 I 0.844
nasonia_NCBI_hmm456104 Nasonia vitripennis nasonia_NCBI_hmm456104 I 0.844
amel4_ncbi_hmm6985 Apis mellifera amel4_ncbi_hmm6985 I 0.844
GK13594 Drosophila willistoni FBgn0215602 I 0.836
GE14558 Drosophila yakuba FBgn0232157 I 0.836
CG11360 Drosophila melanogaster FBgn0039920 D 0.836
GA10947-RA Drosophila pseudoobscura FBgn0071003 I 0.836
GH23938 Drosophila grimshawi FBgn0131395 I 0.836
GG16398 Drosophila erecta FBgn0108630 I 0.836
GL18139 Drosophila persimilis FBgn0155742 I 0.836
GM26809 Drosophila sechellia FBgn0181661 I 0.836
GD24410 Drosophila simulans FBgn0195748 I 0.836
GJ18673 Drosophila virilis FBgn0205827 I 0.836
gw.320.9.1 Nematostella vectensis gw.320.9.1 I 0.836
XP_786425.2 Strongylocentrotus purpuratus XP_786425.2 I 0.836
XP_001175528.1 Strongylocentrotus purpuratus XP_001175528.1 I 0.836
GF20555 Drosophila ananassae FBgn0097561 I 0.828
e_gw1.15.409.1 Daphnia pulex e_gw1.15.409.1 I 0.828
XP_002168292.1 Hydra magnipapillata XP_002168292.1 I 0.828
AAI30196 Xenopus laevis AAI30196 I 0.820
MEX3A Danio rerio ENSDARG00000076638 I 0.811
MEX3A Monodelphis domestica ENSMODG00000016954 I 0.803
LOC100410413 Callithrix jacchus ENSCJAG00000007711 I 0.803
MEX3A Cavia porcellus ENSCPOG00000020219 I 0.803
Ame_R015561 Ailuropoda melanoleuca Ame_R015561 I 0.803
ENSPPYG00000000729 Pongo pygmaeus ENSPPYG00000000729 I 0.803
MEX3A Oryctolagus cuniculus ENSOCUG00000005640 I 0.803
MEX3A Ochotona princeps ENSOPRG00000002937 I 0.803
MEX3A Bos taurus ENSBTAG00000019158 I 0.803
Mex3a Dipodomys ordii ENSDORG00000002921 I 0.803
MEX3A Gorilla gorilla ENSGGOG00000004513 I 0.803
MEX3A Macaca mulatta ENSMMUG00000022307 I 0.803
MEX3A Tursiops truncatus ENSTTRG00000013346 I 0.795
CRE03823 Caenorhabditis remanei CRE03823 I 0.795
CBN20397 Caenorhabditis brenneri CBN20397 I 0.787
MEX3D Meleagris gallopavo ENSMGAG00000002325 I 0.787
CBN24563 Caenorhabditis brenneri CBN24563 I 0.787
mex-3 Caenorhabditis elegans F53G12.5 I 0.779
CBG05100 Caenorhabditis briggsae CBG05100 I 0.779
CJA18034 Caenorhabditis japonica CJA18034 I 0.770
MEX3D Gallus gallus ENSGALG00000001106 I 0.770
ENSOCUG00000014295 Oryctolagus cuniculus ENSOCUG00000014295 I 0.762
MEX3D Canis familiaris ENSCAFG00000023712 I 0.754
MEX3D Felis catus ENSFCAG00000002615 I 0.754
MEX3D Bos taurus ENSBTAG00000044028 I 0.754
MEX3A Pteropus vampyrus ENSPVAG00000010333 I 0.754
Aqu1.215178 Amphimedon queenslandica Aqu1.215178 I 0.754
Ame_R011921 Ailuropoda melanoleuca Ame_R011921 I 0.754
MEX3C Danio rerio ENSDARG00000068971 I 0.752
MEX3C Anolis carolinensis ENSACAG00000010265 I 0.746
MEX3C Ornithorhynchus anatinus ENSOANG00000008116 I 0.746
MEX3B Oryctolagus cuniculus ENSOCUG00000011603 I 0.746
MEX3D Ochotona princeps ENSOPRG00000008708 I 0.746
MEX3C Vicugna pacos ENSVPAG00000003137 I 0.746
Mex3b Mus musculus ENSMUSG00000057706 I 0.746
MEX3C Erinaceus europaeus ENSEEUG00000010864 I 0.746
Mex3c Dipodomys ordii ENSDORG00000007962 I 0.746
MEX3C Macropus eugenii ENSMEUG00000015929 I 0.746
MEX3C Microcebus murinus ENSMICG00000005815 I 0.746
MEX3C Myotis lucifugus ENSMLUG00000012585 I 0.746
MEX3D Procavia capensis ENSPCAG00000010972 I 0.746
MEX3B Canis familiaris ENSCAFG00000013759 I 0.746
MEX3B Sorex araneus ENSSARG00000006007 I 0.746
MEX3C Sorex araneus ENSSARG00000006940 I 0.746
MEX3C Tupaia belangeri ENSTBEG00000014438 I 0.746
MEX3B Procavia capensis ENSPCAG00000014150 I 0.746
D3ZFL6_RAT Rattus norvegicus ENSRNOG00000025142 I 0.746
MEX3B Anolis carolinensis ENSACAG00000011072 I 0.746
MEX3C Echinops telfairi ENSETEG00000003647 I 0.746
Q2YDI4_BOVIN Bos taurus ENSBTAG00000014886 I 0.746
MEX3D Myotis lucifugus ENSMLUG00000017018 N 0.738
AGAP013259 Anopheles gambiae AGAP013259 I 0.730
AAEL012708 Aedes aegypti AAEL012708 I 0.730
MEX3A Microcebus murinus ENSMICG00000002233 I 0.730
CPIJ010634 Culex quinquefasciatus CPIJ010634 I 0.730
CpipJ_CPIJ010634 Culex pipiens CpipJ_CPIJ010634 I 0.730
MKNK2 Callithrix jacchus ENSCJAG00000000539 I 0.721
MEX3B Otolemur garnettii ENSOGAG00000016362 I 0.705