GE20053 (Drosophila yakuba)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 FBgn0237378 T44330_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
bru-3
M117_0.6 		Drosophila melanogaster KUGKUGU RNAcompete
Ray et al.(2013)
RNCMPT00122 		1.000
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
FBpp0265063 RRM 57 125
FBpp0265063 RRM 339 409

Links

Other RRM family RBPs
Other Drosophila yakuba RBPs

64 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRUNOL6 Homo sapiens ENSG00000140488 D 0.821
bru-3 Drosophila melanogaster FBgn0262350 D 1.000
GI13095 Drosophila mojavensis FBgn0135852 I 0.993
GH14684 Drosophila grimshawi FBgn0122160 I 0.993
GG13757 Drosophila erecta FBgn0106020 I 1.000
GF10965 Drosophila ananassae FBgn0088005 I 1.000
CELF5 Takifugu rubripes ENSTRUG00000017937 I 0.864
CELF6 Takifugu rubripes ENSTRUG00000012391 I 0.871
CELF3 Takifugu rubripes ENSTRUG00000012064 I 0.807
CELF5 Tetraodon nigroviridis ENSTNIG00000010634 I 0.864
BRUNOL4 Taeniopygia guttata ENSTGUG00000001649 I 0.886
CELF3 Tupaia belangeri ENSTBEG00000010130 I 0.736
Brunol4 Rattus norvegicus ENSRNOG00000014503 I 0.871
CELF6 Pan troglodytes ENSPTRG00000034360 I 0.821
CELF6 Oryzias latipes ENSORLG00000013392 I 0.871
GL21647 Drosophila persimilis FBgn0159240 I 0.950
GM24582 Drosophila sechellia FBgn0179445 I 1.000
GD12651 Drosophila simulans FBgn0184378 I 1.000
Smp_131780 Schistosoma mansoni Smp_131780 I 0.757
Smp_041280 Schistosoma mansoni Smp_041280 I 0.836
BGIBMGA010431 Bombyx mori BGIBMGA010431 I 0.707
Sjc_0024790 Schistosoma japonicum Sjc_0024790 I 0.743
estExt_fgenesh2_pm.C_730008 Branchiostoma floridae estExt_fgenesh2_pm.C_730008 I 0.721
estExt_fgenesh2_pg.C_sca_1310025 Lottia gigantea estExt_fgenesh2_pg.C_sca_1310025 I 0.764
90208 Helobdella robusta 90208 I 0.801
62054 Helobdella robusta 62054 I 0.764
PHUM315130 Pediculus humanus PHUM315130 I 0.929
FBgn0262475 Drosophila melanogaster FBgn0262475 I 0.707
GA28624-RA Drosophila pseudoobscura FBgn0249984 I 0.971
GK17101 Drosophila willistoni FBgn0219100 I 0.993
GJ13842 Drosophila virilis FBgn0201061 I 0.993
CELF6 Ochotona princeps ENSOPRG00000019169 I 0.829
CELF5 Ochotona princeps ENSOPRG00000007881 I 0.814
CELF2 Ornithorhynchus anatinus ENSOANG00000015432 I 0.729
CELF5 Cavia porcellus ENSCPOG00000005740 I 0.843
LOC100391960 Callithrix jacchus ENSCJAG00000020663 I 0.729
LOC100414308 Callithrix jacchus ENSCJAG00000018355 I 0.821
CELF5 Callithrix jacchus ENSCJAG00000014799 I 0.843
Q2KI16_BOVIN Bos taurus ENSBTAG00000008937 I 0.729
CELF5 Anolis carolinensis ENSACAG00000016959 I 0.836
CPIJ016329 Culex quinquefasciatus CPIJ016329 I 0.714
CJA07020 Caenorhabditis japonica CJA07020 I 0.757
AGAP004950 Anopheles gambiae AGAP004950 I 0.921
AAEL014033 Aedes aegypti AAEL014033 I 0.921
AAEL000695 Aedes aegypti AAEL000695 I 0.700
nasonia_NCBI_hmm496514 Nasonia vitripennis nasonia_NCBI_hmm496514 I 0.893
amel4_ncbi_hmm7761 Apis mellifera amel4_ncbi_hmm7761 I 0.893
CpipJ_CPIJ016329 Culex pipiens CpipJ_CPIJ016329 I 0.714
CELF5 Gasterosteus aculeatus ENSGACG00000012870 I 0.857
CELF6 Ornithorhynchus anatinus ENSOANG00000011308 I 0.893
Celf6 Mus musculus ENSMUSG00000032297 I 0.829
CELF5 Monodelphis domestica ENSMODG00000019151 I 0.843
CELF6 Monodelphis domestica ENSMODG00000001784 I 0.871
CELF5 Macaca mulatta ENSMMUG00000015513 I 0.700
HEXA Macaca mulatta ENSMMUG00000010687 I 0.821
CELF4 Loxodonta africana ENSLAFG00000021352 I 0.879
ENSGGOG00000023049 Gorilla gorilla ENSGGOG00000023049 I 0.800
CELF2 Gorilla gorilla ENSGGOG00000009330 I 0.729
CELF5 Gorilla gorilla ENSGGOG00000002078 I 0.837
A5A2G2_CHICK Gallus gallus ENSGALG00000002413 I 0.886
A5A2G4_CHICK Gallus gallus ENSGALG00000001966 I 0.879
CELF6 Gasterosteus aculeatus ENSGACG00000016626 I 0.871
LOAG_05508 Loa loa LOAG_05508 I 0.807
ENSFCAG00000007908 Felis catus ENSFCAG00000007908 N 0.707