ENSPPYG00000020255 (Pongo pygmaeus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSPPYG00000020255 T03227_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000022667 CCCH ZF 57 82
ENSPPYP00000022667 CCCH ZF 88 111
ENSPPYP00000022667 CCCH ZF 210 235
ENSPPYP00000022667 CCCH ZF 368 393

Links

Other CCCH ZF family RBPs
Other Pongo pygmaeus RBPs

38 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH74368 Xenopus laevis AAH74368 N 0.765
Ame_R001963 Ailuropoda melanoleuca Ame_R001963 N 0.837
ENSCAFG00000003953 Canis familiaris ENSCAFG00000003953 N 0.827
ENSCPOG00000000948 Cavia porcellus ENSCPOG00000000948 N 0.837
ENSGGOG00000023977 Gorilla gorilla ENSGGOG00000023977 N 0.885
ENSMMUG00000001017 Macaca mulatta ENSMMUG00000001017 N 0.863
ENSMODG00000013686 Monodelphis domestica ENSMODG00000013686 N 0.833
ENSOCUG00000010180 Oryctolagus cuniculus ENSOCUG00000010180 N 0.837
ENSOGAG00000009877 Otolemur garnettii ENSOGAG00000009877 N 0.769
ENSPPYG00000018057 Pongo pygmaeus ENSPPYG00000018057 N 0.817
LOC100065893 Equus caballus ENSECAG00000017929 N 0.837
MKRN1 Ochotona princeps ENSOPRG00000010353 N 0.854
MKRN1 Oryzias latipes ENSORLG00000012765 N 0.733
MKRN1 Procavia capensis ENSPCAG00000014683 N 0.796
MKRN1 Sorex araneus ENSSARG00000013683 N 0.769
MKRN1 Sus scrofa ENSSSCG00000016498 N 0.894
MKRN1 Taeniopygia guttata ENSTGUG00000011669 N 0.745
MKRN1 Tetraodon nigroviridis ENSTNIG00000007231 N 0.702
MKRN1 Tarsius syrichta ENSTSYG00000009996 N 0.779
MKRN1 Tursiops truncatus ENSTTRG00000009528 N 0.894
MKRN1 Anolis carolinensis ENSACAG00000010934 N 0.833
Mkrn1 Mus musculus ENSMUSG00000029922 N 0.885
MKRN1 Felis catus ENSFCAG00000013043 N 0.827
MKRN1 Homo sapiens ENSG00000133606 N 0.885
MKRN1 Gasterosteus aculeatus ENSGACG00000019227 N 0.721
MKRN1 Callithrix jacchus ENSCJAG00000004068 N 0.833
MKRN1 Loxodonta africana ENSLAFG00000018408 N 0.875
MKRN1 Choloepus hoffmanni ENSCHOG00000011015 N 0.894
MKRN1 Meleagris gallopavo ENSMGAG00000013208 N 0.755
MKRN1 Microcebus murinus ENSMICG00000002114 N 0.856
MKRN1 Macaca mulatta ENSMMUG00000010420 N 0.827
mkrn1 Danio rerio ENSDARG00000041665 N 0.726
MKRN1_MACEU Macropus eugenii ENSMEUG00000007399 N 0.833
NP_001072050.1 Takifugu rubripes ENSTRUG00000012057 N 0.712
Q68FR1_RAT Rattus norvegicus ENSRNOG00000009280 N 0.865
Q6GLT5 Xenopus laevis Q6GLT5 N 0.765
Q9PTI4_CHICK Gallus gallus ENSGALG00000012852 N 0.824
XR_024878.1 Pan troglodytes ENSPTRG00000019766 N 0.875