CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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WUBG_00259
(
Wuchereria bancrofti
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
WUBG_00259
T17916_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
WUBG_00259T0
KH
144
194
FVKRRARLIGNEGATLKAVELLTKCYIMVQGSTVAAVGPYEGLKHVRMIVE
Links
Other
KH
family RBPs
Other
Wuchereria bancrofti
RBPs
38 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
2217_YCL059C
Saccharomyces paradoxus
2217_YCL059C
N
0.000
2245_YCL059C
Saccharomyces mikatae
2245_YCL059C
N
0.000
2380_YCL059C
Saccharomyces bayanus
2380_YCL059C
N
0.000
85673
Helobdella robusta
85673
N
0.000
AAH41273
Xenopus laevis
AAH41273
N
0.000
AAH72210
Xenopus laevis
AAH72210
N
0.000
AGAP007912
Anopheles gambiae
AGAP007912
N
0.000
amel4_ncbi_hmm4445
Apis mellifera
amel4_ncbi_hmm4445
N
0.000
Ame_R008803
Ailuropoda melanoleuca
Ame_R008803
N
0.000
An02g03350
Aspergillus niger
CADANGAG00001848
N
0.000
ANIA_05875
Aspergillus nidulans
CADANIAG00007161
N
0.000
CLUG_04903
Candida lusitaniae
CLUG_04903
N
0.000
DEHA0E14685g
Debaryomyces hansenii
DEHA0E14685g
N
0.000
DGIL_AUG5s1009g5t1
Acyrtosiphon pisum
DGIL_AUG5s1009g5t1
N
0.000
ENSETEG00000001656
Echinops telfairi
ENSETEG00000001656
N
0.000
ENSPPYG00000004785
Pongo pygmaeus
ENSPPYG00000004785
N
0.706
estExt_fgenesh4_pg.C_90052
Volvox carteri
estExt_fgenesh4_pg.C_90052
N
0.706
estExt_Genewise1.C_20589
Coccomyxa C 169
estExt_Genewise1.C_20589
N
0.000
estExt_Genewise1Plus.C_20041
Sporobolomyces roseus
estExt_Genewise1Plus.C_20041
N
0.000
estExt_Genewise1Plus.C_20668
Chlorella vulgaris
estExt_Genewise1Plus.C_20668
N
0.000
e_gw1.1.604.1
Mucor circinelloides
e_gw1.1.604.1
N
0.725
e_gwh2.2.654.1
Phanerochaete chrysosporium
e_gwh2.2.654.1
N
0.000
GF14827
Drosophila ananassae
FBgn0091854
N
0.000
GSTUMT00008009001
Tuber melanosporum
GSTUMT00008009001
N
0.000
Hrb2
Rattus norvegicus
ENSRNOG00000004035
N
0.000
KLLA0C00506g
Kluyveromyces lactis
KLLA0C00506g
N
0.000
KRR1
Spermophilus tridecemlineatus
ENSSTOG00000003620
N
0.706
KRR1
Sus scrofa
ENSSSCG00000000520
N
0.706
KRR1
Sorex araneus
ENSSARG00000009967
N
0.706
KRR1
Oryzias latipes
ENSORLG00000019616
N
0.000
KRR1
Pteropus vampyrus
ENSPVAG00000000529
N
0.706
KRR1
Tupaia belangeri
ENSTBEG00000008145
N
0.706
KRR1
Takifugu rubripes
ENSTRUG00000004380
N
0.000
KRR1
Tarsius syrichta
ENSTSYG00000009394
N
0.706
KRR1
Tursiops truncatus
ENSTTRG00000001661
N
0.706
KRR1
Vicugna pacos
ENSVPAG00000011750
N
0.000
krr1
Xenopus tropicalis
ENSXETG00000013312
N
0.000
KRR1
Erinaceus europaeus
ENSEEUG00000001466
N
0.000
KRR1
Saccharomyces cerevisiae
YCL059C
N
0.000
KRR1
Procavia capensis
ENSPCAG00000010269
N
0.000
KRR1
Macropus eugenii
ENSMEUG00000011365
N
0.706
KRR1
Gorilla gorilla
ENSGGOG00000013596
N
0.706
KRR1
Gasterosteus aculeatus
ENSGACG00000019481
N
0.000
KRR1
Homo sapiens
ENSG00000111615
N
0.706
KRR1
Felis catus
ENSFCAG00000005207
N
0.706
Krr1
Dipodomys ordii
ENSDORG00000004614
N
0.706
KRR1
Dasypus novemcinctus
ENSDNOG00000015614
N
0.706
KRR1
Danio rerio
ENSDARG00000011246
N
0.000
KRR1
Cavia porcellus
ENSCPOG00000014353
N
0.706
KRR1
Choloepus hoffmanni
ENSCHOG00000009636
N
0.706
KRR1
Loxodonta africana
ENSLAFG00000015986
N
0.000
Krr1
Mus musculus
ENSMUSG00000063334
N
0.000
KRR1
Oryctolagus cuniculus
ENSOCUG00000003925
N
0.706
KRR1
Monodelphis domestica
ENSMODG00000020451
N
0.706
KRR1
Macaca mulatta
ENSMMUG00000009640
N
0.706
KRR1
Myotis lucifugus
ENSMLUG00000002339
N
0.000
KRR1
Otolemur garnettii
ENSOGAG00000010313
N
0.706
KRR1
Ochotona princeps
ENSOPRG00000011858
N
0.706
KRR1
Microcebus murinus
ENSMICG00000015127
N
0.000
KRR1
Meleagris gallopavo
ENSMGAG00000010844
N
0.000
KRR1_BOVIN
Bos taurus
ENSBTAG00000011591
N
0.706
LOC100050169
Equus caballus
ENSECAG00000017498
N
0.706
LOC100407700
Callithrix jacchus
ENSCJAG00000001181
N
0.706
nasonia_NCBI_hmm386444
Nasonia vitripennis
nasonia_NCBI_hmm386444
N
0.000
PASA_GEN_0400107
Daphnia pulex
PASA_GEN_0400107
N
0.000
pasa_Sanger_mRNA6968
Chlamydomonas reinhardtii
pasa_Sanger_mRNA6968
N
0.000
PGUG_03304
Candida guilliermondii
PGUG_03304
N
0.000
PTSG_07198
Salpingoeca rosetta
PTSG_07198
N
0.000
Q5ZKE0_CHICK
Gallus gallus
ENSGALG00000010227
N
0.000
SAKL0C00484g
Lachancea kluyveri
SAKL0C00484g
N
0.000
Skud_Contig2065.14
Saccharomyces kudriavzevii
Skud_Contig2065.14
N
0.000
SPPG_02913
Spizellomyces punctatus
SPPG_02913
N
0.000
XM_846783.1
Canis familiaris
ENSCAFG00000005665
N
0.000
XP_001186312.1
Strongylocentrotus purpuratus
XP_001186312.1
N
0.706
XP_786725.1
Strongylocentrotus purpuratus
XP_786725.1
N
0.706
XR_025480.1
Pan troglodytes
ENSPTRG00000005238
N
0.706