FXR1 (Meleagris gallopavo)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMGAG00000009602 T18988_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FXR1
M152_0.6 		Homo sapiens AYGACR RNAcompete
Ray et al.(2013)
RNCMPT00161 		0.969
FXR2
M020_0.6 		Homo sapiens DGACRRR RNAcompete
Ray et al.(2013)
RNCMPT00020 		0.806
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMGAP00000009956 KH 203 262
ENSMGAP00000009956 KH 267 334
ENSMGAP00000009969 KH 222 281
ENSMGAP00000009969 KH 286 353

Links

Other KH family RBPs
Other Meleagris gallopavo RBPs

98 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAC59682 Xenopus laevis AAC59682 I 0.930
AAC59683 Xenopus laevis AAC59683 I 0.762
AAEL009326 Aedes aegypti AAEL009326 I 0.712
AAH43638 Xenopus laevis AAH43638 I 0.930
AAH73457 Xenopus laevis AAH73457 I 0.938
AAI12953 Xenopus laevis AAI12953 I 0.769
AAI31885 Xenopus laevis AAI31885 I 0.938
AAI70204 Xenopus laevis AAI70204 I 0.769
AAY79165 Xenopus laevis AAY79165 I 0.938
AAY79166 Xenopus laevis AAY79166 I 0.938
amel4_ncbi_hmm37854 Apis mellifera amel4_ncbi_hmm37854 I 0.727
Ame_R012967 Ailuropoda melanoleuca Ame_R012967 I 0.814
Ame_R018977 Ailuropoda melanoleuca Ame_R018977 I 0.969
CABZ01043311.1 Danio rerio ENSDARG00000078462 I 0.703
CPIJ019402 Culex quinquefasciatus CPIJ019402 I 0.712
CpipJ_CPIJ019402 Culex pipiens CpipJ_CPIJ019402 I 0.712
ENSPPYG00000007930 Pongo pygmaeus ENSPPYG00000007930 I 0.806
ENSPPYG00000014327 Pongo pygmaeus ENSPPYG00000014327 I 0.969
FMR1 Oryzias latipes ENSORLG00000009094 I 0.748
FMR1 Gasterosteus aculeatus ENSGACG00000018742 I 0.729
FMR1 Canis familiaris ENSCAFG00000019085 I 0.800
fmr1 Danio rerio ENSDARG00000037433 I 0.731
fmr1 Xenopus tropicalis ENSXETG00000019647 I 0.777
FXR1 Ornithorhynchus anatinus ENSOANG00000011045 I 0.961
FXR1 Oryctolagus cuniculus ENSOCUG00000023518 I 0.969
Fxr1 Mus musculus ENSMUSG00000027680 I 0.961
FXR1 Macaca mulatta ENSMMUG00000012105 I 0.969
FXR1 Ochotona princeps ENSOPRG00000009223 I 0.938
FXR1 Oryzias latipes ENSORLG00000011787 I 0.837
FXR1 Monodelphis domestica ENSMODG00000021294 I 0.961
FXR1 Pteropus vampyrus ENSPVAG00000002823 I 0.977
FXR1 Takifugu rubripes ENSTRUG00000003486 I 0.837
fxr1 Xenopus tropicalis ENSXETG00000019441 I 0.953
FXR1 Vicugna pacos ENSVPAG00000003384 I 0.969
FXR1 Tursiops truncatus ENSTTRG00000014698 I 0.969
FXR1 Tarsius syrichta ENSTSYG00000001610 I 0.961
FXR1 Tetraodon nigroviridis ENSTNIG00000003790 I 0.829
FXR1 Taeniopygia guttata ENSTGUG00000010560 I 0.992
FXR1 Sus scrofa ENSSSCG00000011769 I 0.961
FXR1 Myotis lucifugus ENSMLUG00000006840 I 0.969
FXR1 Erinaceus europaeus ENSEEUG00000006823 I 0.953
FXR1 Echinops telfairi ENSETEG00000006891 I 0.969
fxr1 Danio rerio ENSDARG00000022968 I 0.860
FXR1 Homo sapiens ENSG00000114416 D 0.969
Fxr1 Dipodomys ordii ENSDORG00000005853 I 0.805
FXR1 Cavia porcellus ENSCPOG00000010418 I 0.969
FXR1 Gasterosteus aculeatus ENSGACG00000006052 I 0.837
FXR1 Callithrix jacchus ENSCJAG00000012802 I 0.969
FXR1 Gorilla gorilla ENSGGOG00000009957 I 0.969
FXR1 Dasypus novemcinctus ENSDNOG00000019065 I 0.805
FXR1 Anolis carolinensis ENSACAG00000003918 I 0.977
FXR1 Loxodonta africana ENSLAFG00000001908 I 0.969
FXR1 Equus caballus ENSECAG00000007560 I 0.969
FXR1 Pan troglodytes ENSPTRG00000015656 I 0.969
FXR1 Canis familiaris ENSCAFG00000011582 I 0.969
FXR1_BOVIN Bos taurus ENSBTAG00000016457 I 0.969
FXR1_RAT Rattus norvegicus ENSRNOG00000011938 I 0.844
FXR2 Takifugu rubripes ENSTRUG00000010696 I 0.762
FXR2 Tursiops truncatus ENSTTRG00000010231 I 0.806
FXR2 Tetraodon nigroviridis ENSTNIG00000005118 I 0.769
FXR2 Vicugna pacos ENSVPAG00000000147 I 0.806
FXR2 Dasypus novemcinctus ENSDNOG00000001047 I 0.791
fxr2 Danio rerio ENSDARG00000016260 I 0.703
FXR2 Cavia porcellus ENSCPOG00000023303 I 0.806
FXR2 Callithrix jacchus ENSCJAG00000015063 I 0.806
FXR2 Canis familiaris ENSCAFG00000016685 I 0.814
FXR2 Bos taurus ENSBTAG00000005462 I 0.806
FXR2 Anolis carolinensis ENSACAG00000000561 I 0.798
FXR2 Tupaia belangeri ENSTBEG00000002514 I 0.806
FXR2 Spermophilus tridecemlineatus ENSSTOG00000005657 I 0.806
FXR2 Homo sapiens ENSG00000129245 D 0.806
FXR2 Ochotona princeps ENSOPRG00000017108 I 0.806
FXR2 Oryctolagus cuniculus ENSOCUG00000010393 I 0.806
Fxr2 Mus musculus ENSMUSG00000018765 I 0.806
FXR2 Monodelphis domestica ENSMODG00000007179 I 0.806
FXR2 Macaca mulatta ENSMMUG00000013510 I 0.806
FXR2 Myotis lucifugus ENSMLUG00000003438 I 0.775
FXR2 Microcebus murinus ENSMICG00000014799 I 0.806
FXR2 Oryzias latipes ENSORLG00000011571 I 0.815
FXR2 Procavia capensis ENSPCAG00000013184 I 0.798
FXR2 Felis catus ENSFCAG00000009620 I 0.806
FXR2 Sus scrofa ENSSSCG00000017953 I 0.806
FXR2 Erinaceus europaeus ENSEEUG00000013410 I 0.806
Fxr2 Rattus norvegicus ENSRNOG00000011876 I 0.806
FXR2 Pteropus vampyrus ENSPVAG00000016306 I 0.806
FXR2 Loxodonta africana ENSLAFG00000001114 I 0.798
FXR2 Pan troglodytes ENSPTRG00000008698 I 0.806
FXR2 Echinops telfairi ENSETEG00000018613 I 0.798
LOC100147323 Equus caballus ENSECAG00000007051 I 0.806
nasonia_NCBI_hmm462784 Nasonia vitripennis nasonia_NCBI_hmm462784 I 0.735
P51113 Xenopus laevis P51113 I 0.762
P51115 Xenopus laevis P51115 I 0.938
PHUM440700 Pediculus humanus PHUM440700 I 0.727
Q2KHP9 Xenopus laevis Q2KHP9 I 0.769
Q5F3S6_CHICK Gallus gallus ENSGALG00000008864 I 1.000
Q5ZHM3_CHICK Gallus gallus ENSGALG00000009177 I 0.802
Q7ZTQ5 Xenopus laevis Q7ZTQ5 I 0.930